Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0816
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    56   3e-10
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    47   1e-07
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.2  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   7.4  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   7.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.7  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 56.0 bits (129), Expect = 3e-10
 Identities = 26/72 (36%), Positives = 42/72 (58%)
 Frame = +2

Query: 290 AVKVFRVLYYAKDFDVFMRTACWMRERINGGMFVYAFTAACFHRTDCKGLYLPAPYEIYP 469
           A K+ R+   A+  D  +  A + R+R+N  +F YAF+ A  HR D + L LP+   ++P
Sbjct: 91  AGKLIRIFLAAESIDDLLSNAVFCRDRVNPYLFYYAFSVALLHRPDTQNLDLPSFIHVFP 150

Query: 470 YFFVDSHVISKA 505
             +VDS V ++A
Sbjct: 151 DKYVDSQVFARA 162


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 47.2 bits (107), Expect = 1e-07
 Identities = 22/61 (36%), Positives = 36/61 (59%)
 Frame = +2

Query: 323 KDFDVFMRTACWMRERINGGMFVYAFTAACFHRTDCKGLYLPAPYEIYPYFFVDSHVISK 502
           ++ D  +  A + R+R+N  +F YA + A  HR D + + LP+  E +P  +VDS V +K
Sbjct: 102 RNVDDLLSVAVYARDRVNPYLFSYALSVAILHRQDTQDIDLPSFIESFPDKYVDSKVFAK 161

Query: 503 A 505
           A
Sbjct: 162 A 162


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -2

Query: 391 DEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFF 284
           D   ++ P + P R P +N + L  +E S +  G F
Sbjct: 125 DMETTLTPCASPNRKPDDNQDHLRRLEMSLEKSGLF 160


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 66  DMKMKELCIMKLLDHI 113
           D K+  LC+  L+DH+
Sbjct: 442 DEKLNALCMTWLMDHV 457


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 598 WRKGVRRSLSXND 636
           W+  +R SLS ND
Sbjct: 184 WQNSIRHSLSFND 196


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -1

Query: 698 MWKVXHVGVKVDXPPMXXDI 639
           M +  H GV V  PPM   I
Sbjct: 397 MKEAKHCGVNVPVPPMQSQI 416


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,359
Number of Sequences: 336
Number of extensions: 2734
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)