BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0816 (701 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z46828-1|CAA86856.1| 542|Caenorhabditis elegans Hypothetical pr... 31 0.80 Z77657-6|CAB01150.2| 607|Caenorhabditis elegans Hypothetical pr... 29 3.2 AL132949-29|CAB61107.1| 209|Caenorhabditis elegans Hypothetical... 29 3.2 L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell m... 28 5.6 AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 28 7.4 AL132949-25|CAB61103.1| 209|Caenorhabditis elegans Hypothetical... 27 9.8 >Z46828-1|CAA86856.1| 542|Caenorhabditis elegans Hypothetical protein R03D7.2 protein. Length = 542 Score = 31.1 bits (67), Expect = 0.80 Identities = 25/62 (40%), Positives = 32/62 (51%) Frame = -2 Query: 406 GSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFFHLELVGVDEGSPRGSMPIL 227 GS +V E A+V PF + + E +EV V+ ED D L L V E PRG +P L Sbjct: 137 GSNTVSEPANV-PFQNLLQPGLEGMEV---VQQEEDMDIDEELLLGPVAEEEPRGYVPPL 192 Query: 226 YI 221 I Sbjct: 193 VI 194 >Z77657-6|CAB01150.2| 607|Caenorhabditis elegans Hypothetical protein F08H9.1 protein. Length = 607 Score = 29.1 bits (62), Expect = 3.2 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = -2 Query: 352 RSPHENIEVLSVVEDSEDFD 293 R+P+ENI++L +DSED D Sbjct: 581 RAPYENIDLLLSTDDSEDID 600 >AL132949-29|CAB61107.1| 209|Caenorhabditis elegans Hypothetical protein Y53F4B.33 protein. Length = 209 Score = 29.1 bits (62), Expect = 3.2 Identities = 16/67 (23%), Positives = 32/67 (47%) Frame = -2 Query: 448 GQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFFHLELV 269 GQV L+V + S ++ + + + F + ++P E ++V+ +DF G F ++ Sbjct: 51 GQVPVLSVDGFDIPQSAAIIRYLA-NKFGYAGKTPEEQAWADAIVDQFKDFMGAFRQLIM 109 Query: 268 GVDEGSP 248 G P Sbjct: 110 AQRSGKP 116 >L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell migration protein10, isoform c protein. Length = 779 Score = 28.3 bits (60), Expect = 5.6 Identities = 25/97 (25%), Positives = 41/97 (42%) Frame = -2 Query: 418 VEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFFHLELVGVDEGSPRGS 239 +EA + + E A + P EN E SV D+ DF + +++ + P+ Sbjct: 80 LEADTEEDIAETADDEESKDPVEKT-ENFEP-SVTMDTYDFPDPYPVQIRARPQVPPKPP 137 Query: 238 MPILYISMNCLTTSTFMYLSQLFSMXYSLAISLMSSN 128 + + SMN + S L +L +L L SSN Sbjct: 138 IDTVRYSMNNIKESADWQLDELLEELEALETQLNSSN 174 >AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical protein K07D4.6 protein. Length = 389 Score = 27.9 bits (59), Expect = 7.4 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%) Frame = +3 Query: 369 GSTEACSS---TLLLPRASTEPTARVSTCPLLTRSIPTSSLT 485 G+TE S+ T +TEPT ST T ++PTS+ T Sbjct: 257 GTTEETSTEPETTTTSTTTTEPTTTTSTTTQTTTTVPTSTST 298 >AL132949-25|CAB61103.1| 209|Caenorhabditis elegans Hypothetical protein Y53F4B.29 protein. Length = 209 Score = 27.5 bits (58), Expect = 9.8 Identities = 15/55 (27%), Positives = 28/55 (50%) Frame = -2 Query: 448 GQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFF 284 GQV L+V E S ++ + + + F + ++P E ++V+ +DF G F Sbjct: 51 GQVPVLSVDGFEIPQSAAIIRYLA-NKFGYAGKTPEEQAWADAIVDQFKDFMGSF 104 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,094,472 Number of Sequences: 27780 Number of extensions: 267030 Number of successful extensions: 660 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 635 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 660 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1624019012 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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