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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0814
         (657 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15)                 44   8e-05
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)              39   0.004
SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.)              38   0.007
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)                   37   0.013
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)                  34   0.089
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)                 33   0.15 
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)                 33   0.20 
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.27 
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.36 
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)                 32   0.47 
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)                       32   0.47 
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)                        32   0.47 
SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.83 
SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16)                 31   1.1  
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.4  
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)                 30   1.4  
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.5  
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)                       29   2.5  
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.5  
SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11)                 29   2.5  
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   3.3  
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)                       29   4.4  
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.4  
SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13)                 29   4.4  
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   4.4  
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)                        29   4.4  
SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.8  
SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23)                 28   5.8  
SB_33542| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.8  
SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0)                    28   5.8  
SB_23441| Best HMM Match : IncA (HMM E-Value=2.5)                      28   5.8  
SB_53461| Best HMM Match : Amelogenin (HMM E-Value=0.099)              28   7.7  
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)             28   7.7  
SB_58219| Best HMM Match : SOCS_box (HMM E-Value=2e-07)                28   7.7  
SB_44405| Best HMM Match : Extensin_2 (HMM E-Value=4.5)                28   7.7  

>SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15)
          Length = 876

 Score = 44.4 bits (100), Expect = 8e-05
 Identities = 22/51 (43%), Positives = 29/51 (56%)
 Frame = +3

Query: 258 GIIVNRNFGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKRRDVETV 410
           G  ++ NFGFVQF  E  A +A+ K +G +  GK I VR   + R DV  V
Sbjct: 75  GCSLHANFGFVQFETEKGADEAVAKEHGRIINGKKIDVR-IVNSRADVNLV 124


>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 371

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +3

Query: 270 NRNFGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKRRD 398
           +R FGFV FA    AQ A+K  NG   +G+ + +  +  + RD
Sbjct: 98  SRGFGFVTFANPEDAQTAVKSLNGKEVQGRTLKIAPSISRGRD 140


>SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 414

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 18/36 (50%), Positives = 23/36 (63%)
 Frame = +3

Query: 270 NRNFGFVQFAEESSAQDAIKKANGSVFKGKNIPVRA 377
           +RNFG+V F +E  A DA+K+  G   KGK I  RA
Sbjct: 16  SRNFGYVTFRDEQDAADAMKQMGGESGKGKEIFGRA 51


>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
          Length = 842

 Score = 37.1 bits (82), Expect = 0.013
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = +1

Query: 127 NLTLDRIDMKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKM 255
           N     +D K+  T   +I++G LS NT+ E++  YF Q+GK+
Sbjct: 167 NSGAQELDGKKMVTTTKKIFIGGLSTNTSEEDMKKYFSQFGKV 209


>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
          Length = 328

 Score = 34.3 bits (75), Expect = 0.089
 Identities = 13/29 (44%), Positives = 22/29 (75%)
 Frame = +1

Query: 178 RIYVGALSDNTTVEELYDYFIQYGKMMGL 264
           +++VG LS  TT E L +YF +YG+++G+
Sbjct: 30  KLFVGGLSYETTKESLKEYFSKYGELVGV 58


>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
          Length = 1118

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 261 IIVNRNFGFVQFAEESSAQDAIKKANGSVFKGKNIPV 371
           I +  N+GFV+F ++  A DA+ + NG    G+ I V
Sbjct: 32  INLKNNYGFVEFEDDRDADDAVYECNGKEMLGERILV 68


>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
          Length = 929

 Score = 33.1 bits (72), Expect = 0.20
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +3

Query: 261 IIVNRNFGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKRRD 398
           I + R +GFV+F +   A+DA+   NG    G+ + V  +  +R +
Sbjct: 718 ISLKRGYGFVEFDDHRDAEDAVHDLNGRDLIGERVVVEFSKGRRSE 763


>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 364

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +3

Query: 273 RNFGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKRR 395
           R F FV F  + + +DAI + +G  F G+++ V  A  + +
Sbjct: 270 RGFAFVTFGSKKNMEDAINELDGQEFDGRSMKVNQARSREQ 310


>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 291

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = +3

Query: 270 NRNFGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDK 389
           +R FGFV          AI+K N S   G+NI V  A DK
Sbjct: 48  SRGFGFVLLQSADQIAPAIEKMNQSSVGGRNITVALALDK 87


>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
          Length = 496

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +1

Query: 178 RIYVGALSDNTTVEELYDYFIQYGKMM 258
           +I++G L+ NTT E L DYF Q+G ++
Sbjct: 51  KIFIGGLNWNTTEEGLKDYFSQWGTIV 77


>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
          Length = 514

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 12/40 (30%), Positives = 25/40 (62%)
 Frame = +3

Query: 270 NRNFGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDK 389
           ++ +GFVQF E  +A+ A+++ NG    G+ + +   T++
Sbjct: 282 SKGYGFVQFREAEAAKRAMEQMNGFELAGRPLKIGPVTER 321


>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
          Length = 1026

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 20/77 (25%), Positives = 32/77 (41%)
 Frame = +3

Query: 279 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKRRDVETVTIYPEVPPAVALKDTQ 458
           FGFVQF     A  A+++ N     G+ + V  A  K    E    + +   +  L+D +
Sbjct: 292 FGFVQFTNVFDAAKALEEMNAKKILGRPVAVDWAVPKSMYTENQEKHKKDYNSNTLQDDE 351

Query: 459 MEDESEEAYDNYGNNND 509
              E  E    + N +D
Sbjct: 352 KGGEDSEGTTEHKNRDD 368


>SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 333

 Score = 31.1 bits (67), Expect = 0.83
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = +3

Query: 273 RNFGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKRRDVETVTIYPEVPP 434
           + +G+V++ +ESSA  A+   + +  KG+ I V  +    R       +P  PP
Sbjct: 211 KGYGYVEYEQESSASTAVLTLDKTEVKGRTISVALSNPPTRRGPPRQEHPPPPP 264


>SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16)
          Length = 76

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +3

Query: 273 RNFGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAA 380
           R++GFV FA+  SA  AI   NG+   G  + V  A
Sbjct: 35  RDYGFVYFAKRESAVQAIDGINGAYIDGCKLEVSLA 70


>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 435

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 11/34 (32%), Positives = 23/34 (67%)
 Frame = +1

Query: 154 KQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKM 255
           K++     +++VG L ++TT + L +YF Q+G++
Sbjct: 192 KEELNVPKKLFVGRLPESTTEKTLMEYFAQFGEV 225


>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
          Length = 507

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +1

Query: 130 LTLDRIDMKQKSTAHLRIYVGALSDNTTVEELYDYFIQYG 249
           L+L   +M + ++   R+YVG L  +   ++L+D F +YG
Sbjct: 246 LSLMSSNMNRSNSNDCRVYVGNLPQDVREKDLHDIFYKYG 285



 Score = 29.5 bits (63), Expect = 2.5
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +3

Query: 279 FGFVQFAEESSAQDAIKKANGSVFKGKNIPV 371
           F FV+F +   A+DA+K  +G  F G  I V
Sbjct: 302 FAFVEFEDPRDAEDAVKGRDGHEFDGYRIRV 332


>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 6116

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 387  KRRDVETVTIYPEVPPAVALKDTQMEDESEEAYDNYGNNNDMVFKRNLKRATTGQK 554
            +RR++      P + P   + D+  +    E   NY NNN      + K+ TT Q+
Sbjct: 5821 RRRELREQLREPRIRPRKGVVDSDFQIYKREYNKNYSNNNSENSSSSNKKTTTQQQ 5876


>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
          Length = 420

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = +3

Query: 270 NRNFGFVQFAEESSAQDAIKKANGSVFKGKNIPV 371
           +RN+GFV F ++  +++ +KK++  V  GK + V
Sbjct: 119 SRNYGFVLFKDDGPSKEVLKKSH--VINGKTVDV 150



 Score = 28.7 bits (61), Expect = 4.4
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = +1

Query: 148 DMKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKMMGL*LI 273
           D+  K     ++ V  L  +TTV+EL +YF + G++ G+ L+
Sbjct: 227 DLMAKVIQSKKLMVQDLDFDTTVDELREYFEKCGELTGIDLL 268



 Score = 28.3 bits (60), Expect = 5.8
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 181 IYVGALSDNTTVEELYDYFIQYGKM 255
           ++VG L+  T  E L DYF Q+G++
Sbjct: 82  VFVGGLASGTDEEGLKDYFEQFGEV 106


>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 550

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +1

Query: 181 IYVGALSDNTTVEELYDYFIQYGKMMGL*LI 273
           +YVG L    T ++L D+F Q+G++  + ++
Sbjct: 306 LYVGGLEGKVTEQDLRDHFYQFGELRSISMV 336


>SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11)
          Length = 67

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 261 IIVNRNFGFVQFAEESSAQDAIKKANGSVFKGK 359
           II+   +GFV+F     A+DA+ + NG    G+
Sbjct: 34  IILKDGYGFVEFDYSDDAEDAVYECNGKKMLGE 66


>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 721

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
 Frame = +3

Query: 273 RNFGFVQFAEESSAQDAIKKANGSVFKGKNIPV-----RAATDKRRDVETVTIYP 422
           + +  V++     AQ A++  NG+   G+NI V     R  + K R ++ VT  P
Sbjct: 334 KGYALVEYETFKEAQSALEALNGAEMLGQNISVDWAFIRGPSKKSRSLQAVTSLP 388


>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
          Length = 382

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +3

Query: 267 VNRNFGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKRRDVE 404
           +++ +GFV+F  E  A  AIK  N     GK I V  A+   ++++
Sbjct: 52  LHQGYGFVEFLGEEDADYAIKVMNMIKVYGKPIRVNKASAHNKNLD 97


>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 299

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +1

Query: 178 RIYVGALSDNTTVEELYDYFIQYGKMMGL*LIEILDLCNS 297
           +++VG L+  TT E L +YF  YG+     L +++ +C+S
Sbjct: 15  KLFVGGLNRETTNETLREYFEAYGE-----LTDVVVICDS 49


>SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13)
          Length = 260

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 279 FGFVQFAEESSAQDAIKKANGSVFKGKNIPV 371
           FGFV F   + A  A +K NG++  G+ + V
Sbjct: 126 FGFVTFNTAAEANKAREKLNGTIVDGRKVEV 156


>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 375

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +1

Query: 178 RIYVGALSDNTTVEELYDYFIQYG 249
           ++++G L+  TT E+L +YF  YG
Sbjct: 203 KVFIGGLAFGTTEEDLKEYFSTYG 226


>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
          Length = 593

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +3

Query: 270 NRNFGFVQFAEESSAQDAIKKANGSVFKGKNIPV 371
           ++ F FV++    +AQ A+++ NG +  G+NI V
Sbjct: 142 HKGFAFVEYDLPEAAQLALEQMNGVLLGGRNIKV 175


>SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 347

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3

Query: 267 VNRNFGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDK 389
           +++ FGFV +    SAQ+AI+  NG     K + V+    K
Sbjct: 301 MSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLKVQLKRPK 341


>SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23)
          Length = 362

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3

Query: 267 VNRNFGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDK 389
           +++ FGFV +    SAQ+AI+  NG     K + V+    K
Sbjct: 316 MSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLKVQLKRPK 356


>SB_33542| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1182

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 169 AHLRIYVGALSDNTTVEELYDYFIQYGKMMGL 264
           AH+R Y+    D TT E+L +  + YG + G+
Sbjct: 677 AHVRKYINEGHDVTTPEQLKNAMLSYGGLQGV 708


>SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0)
          Length = 1238

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 19/64 (29%), Positives = 28/64 (43%)
 Frame = +3

Query: 399 VETVTIYPEVPPAVALKDTQMEDESEEAYDNYGNNNDMVFKRNLKRATTGQKFMMREVEA 578
           V+T   Y E+  + ALK+   E +   +    G   D V  +   R TTG K +  E E 
Sbjct: 600 VKTQGGYDEIKESSALKEMMDEAKRTRSEAGSGAEQDAVETKGKIRETTGHKDVEEEAED 659

Query: 579 VAVG 590
             +G
Sbjct: 660 RVLG 663


>SB_23441| Best HMM Match : IncA (HMM E-Value=2.5)
          Length = 927

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 18/81 (22%), Positives = 31/81 (38%)
 Frame = +3

Query: 396 DVETVTIYPEVPPAVALKDTQMEDESEEAYDNYGNNNDMVFKRNLKRATTGQKFMMREVE 575
           D  T+ + PEV    + + T   +++  AY N G    +           G     R VE
Sbjct: 124 DRSTLAVTPEVSTKDSTRQTIKLNDTAIAYSNGGPTATLSLYSYYHSLPNGLSLQTRSVE 183

Query: 576 AVAVGLGPRGKGVRGARSRGP 638
           ++    G +   +RG  +  P
Sbjct: 184 SIDTTAGLKTWAIRGTATYSP 204


>SB_53461| Best HMM Match : Amelogenin (HMM E-Value=0.099)
          Length = 2489

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 20/70 (28%), Positives = 30/70 (42%)
 Frame = +3

Query: 348 FKGKNIPVRAATDKRRDVETVTIYPEVPPAVALKDTQMEDESEEAYDNYGNNNDMVFKRN 527
           FK KN+  +A     R  E     P  PP+  L+ T+ ED       N+G+       +N
Sbjct: 73  FKRKNLGFQAPRFVERFEEEFPCIPPQPPSKKLRVTENEDLVLTPSSNHGSTAQ---DKN 129

Query: 528 LKRATTGQKF 557
           + R+  G  F
Sbjct: 130 MCRSRRGTSF 139


>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
          Length = 1531

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 24/90 (26%), Positives = 40/90 (44%)
 Frame = +3

Query: 270 NRNFGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKRRDVETVTIYPEVPPAVALK 449
           N  + FVQFAE SSA  A +K +   + G+N  V+    K   + T+ +         + 
Sbjct: 286 NNPYAFVQFAELSSAIQARRKMDRE-YVGRN-RVKVGFGKVNPINTIWV-------GGVT 336

Query: 450 DTQMEDESEEAYDNYGNNNDMVFKRNLKRA 539
           ++  E + E  +  YG    +V  R   +A
Sbjct: 337 NSLSEQQVERHFGRYGRVTKVVINRVTNQA 366


>SB_58219| Best HMM Match : SOCS_box (HMM E-Value=2e-07)
          Length = 507

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +1

Query: 82  ISQKYSCNK*ITMADNLTLDRIDMKQKSTAHLRIYVGALSDNTTVEELYD 231
           IS ++      T ADN T+ R+    K+ ++   Y G +S     +ELY+
Sbjct: 312 ISDQFDSQSVNTNADNNTVRRLSSSLKTLSNCGWYWGPMSSKEAEKELYN 361


>SB_44405| Best HMM Match : Extensin_2 (HMM E-Value=4.5)
          Length = 325

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 510 CHYYFHSCHKLPHFHLP 460
           CHY++H  H   H+H P
Sbjct: 293 CHYHYHHHHPPYHYHYP 309


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,030,251
Number of Sequences: 59808
Number of extensions: 373138
Number of successful extensions: 1166
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1164
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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