Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0813
         (706 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1FL30 Cluster: Acyltransferase 3; n=2; Pseudomonas put...    34   3.9  
UniRef50_UPI0000E25489 Cluster: PREDICTED: similar to PD2 protei...    33   9.0  
UniRef50_Q9H166 Cluster: RNA polymerase-associated protein 1 hom...    33   9.0  
UniRef50_O75239 Cluster: F23149_1; n=1; Homo sapiens|Rep: F23149...    33   9.0  
UniRef50_A6RTN3 Cluster: Predicted protein; n=1; Botryotinia fuc...    33   9.0  

>UniRef50_A1FL30 Cluster: Acyltransferase 3; n=2; Pseudomonas
           putida|Rep: Acyltransferase 3 - Pseudomonas putida W619
          Length = 369

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = -1

Query: 298 INLFLSPSFN*SKGWYGNRDXQTIAGTVRLYRAFY-IXLLNSWKYSL 161
           +NL L+P++   KGW  N    +++  V LY +F+ I L   W++ L
Sbjct: 140 LNLLLAPAWGLEKGWSFNAPIWSVSVEVLLYASFFAICLAGRWRWLL 186


>UniRef50_UPI0000E25489 Cluster: PREDICTED: similar to PD2 protein,
           partial; n=1; Pan troglodytes|Rep: PREDICTED: similar to
           PD2 protein, partial - Pan troglodytes
          Length = 448

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 20/60 (33%), Positives = 32/60 (53%)
 Frame = +3

Query: 204 RYRRTVPAIVX*SRFPYHPFDQLKLGERKRFILLVKKLQRHNRSAMMELGLCDDLINPAT 383
           +Y  ++P I    +F  +PFDQ +  + K   L  +K  +H+     +LG+  DLINP T
Sbjct: 120 KYCNSLPDIPFDPKFITYPFDQNRFVQYKATSL--EKQHKHDLLTEPDLGVTIDLINPDT 177


>UniRef50_Q9H166 Cluster: RNA polymerase-associated protein 1
           homolog; n=32; Eumetazoa|Rep: RNA polymerase-associated
           protein 1 homolog - Homo sapiens (Human)
          Length = 531

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 20/60 (33%), Positives = 32/60 (53%)
 Frame = +3

Query: 204 RYRRTVPAIVX*SRFPYHPFDQLKLGERKRFILLVKKLQRHNRSAMMELGLCDDLINPAT 383
           +Y  ++P I    +F  +PFDQ +  + K   L  +K  +H+     +LG+  DLINP T
Sbjct: 34  KYCNSLPDIPFDPKFITYPFDQNRFVQYKATSL--EKQHKHDLLTEPDLGVTIDLINPDT 91


>UniRef50_O75239 Cluster: F23149_1; n=1; Homo sapiens|Rep: F23149_1
           - Homo sapiens (Human)
          Length = 510

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 20/60 (33%), Positives = 32/60 (53%)
 Frame = +3

Query: 204 RYRRTVPAIVX*SRFPYHPFDQLKLGERKRFILLVKKLQRHNRSAMMELGLCDDLINPAT 383
           +Y  ++P I    +F  +PFDQ +  + K   L  +K  +H+     +LG+  DLINP T
Sbjct: 24  KYCNSLPDIPFDPKFITYPFDQNRFVQYKATSL--EKQHKHDLLTEPDLGVTIDLINPDT 81


>UniRef50_A6RTN3 Cluster: Predicted protein; n=1; Botryotinia
           fuckeliana B05.10|Rep: Predicted protein - Botryotinia
           fuckeliana B05.10
          Length = 261

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +3

Query: 282 ERKRFILLVKKLQRHNRSAMMELGLCDDLINPATNINFLGTNLSHLSYD 428
           E+K+     KK ++  +     + +CD  I+P T+  FL   L+H S+D
Sbjct: 177 EKKKKKKKKKKKKKKKKKIRYRISICDTFIHPLTSSRFLIHTLTHKSHD 225


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 661,025,426
Number of Sequences: 1657284
Number of extensions: 11931875
Number of successful extensions: 24938
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24936
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)