BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0813 (706 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_04_0158 + 17822049-17822151,17822230-17822443,17822540-178227... 29 2.7 01_05_0772 + 25056973-25057285,25057678-25058006,25058113-250583... 29 3.6 11_02_0134 - 8681176-8681193,8681452-8681987,8682028-8682544 29 4.8 08_01_0072 - 513561-513926,514055-514189,514274-514417,514505-51... 28 8.3 >03_04_0158 + 17822049-17822151,17822230-17822443,17822540-17822700, 17822811-17822956,17824048-17824110,17824199-17824291, 17824313-17824396,17824736-17824897,17824998-17825104, 17825715-17825812,17825940-17826208 Length = 499 Score = 29.5 bits (63), Expect = 2.7 Identities = 13/35 (37%), Positives = 23/35 (65%) Frame = +3 Query: 330 RSAMMELGLCDDLINPATNINFLGTNLSHLSYDLH 434 RS ++E+G+ +D+ NP T +F T++S +Y H Sbjct: 245 RSVLVEIGIAEDMHNPVTYGSF-ATSVSTFNYMCH 278 >01_05_0772 + 25056973-25057285,25057678-25058006,25058113-25058360, 25058481-25059396 Length = 601 Score = 29.1 bits (62), Expect = 3.6 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Frame = -1 Query: 415 CDKXVPRKLMLVAGFIRSSHRPSSIIAERLCLCSF--FTSKINLFLS 281 C VPR L+ ++ SS I +++C C + FT I L+L+ Sbjct: 86 CHDIVPRVAPLLQDIVKEYVNTSSYILQKVCACCYVQFTLFIELYLT 132 >11_02_0134 - 8681176-8681193,8681452-8681987,8682028-8682544 Length = 356 Score = 28.7 bits (61), Expect = 4.8 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = -3 Query: 299 NKSFSFTKFQLIERMVWKSRSXNDSRHGP 213 NKSF K +++E W +R NDS H P Sbjct: 169 NKSFDIAK-KIMESCPWLAREENDSGHTP 196 >08_01_0072 - 513561-513926,514055-514189,514274-514417,514505-514744, 516325-516636 Length = 398 Score = 27.9 bits (59), Expect = 8.3 Identities = 10/45 (22%), Positives = 20/45 (44%) Frame = -1 Query: 418 KCDKXVPRKLMLVAGFIRSSHRPSSIIAERLCLCSFFTSKINLFL 284 +C K + + + L A ++ RP + +E L F + L + Sbjct: 203 QCPKKISKAIFLTATMVKDGQRPFDVFSEELASADVFLQESQLLI 247 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,697,394 Number of Sequences: 37544 Number of extensions: 325481 Number of successful extensions: 646 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 634 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 646 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1815633512 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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