Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0813
         (706 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         27   0.17 
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    27   0.17 
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    27   0.17 
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    25   0.70 
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    23   3.7  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    23   3.7  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   4.9  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    21   8.6  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              21   8.6  

>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +1

Query: 91  EYSETMESDILNWGNKEVEELLHKENISSCLIXICKTHDIDGPCLLSFXDRDF 249
           +Y     SDI  W +K    +L    + S L  I K     GP L  + D  F
Sbjct: 60  DYKNNYPSDIDQWHDKIFVTMLRYNGVPSSLNVISKKVGDGGPLLQPYPDWSF 112


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +1

Query: 91  EYSETMESDILNWGNKEVEELLHKENISSCLIXICKTHDIDGPCLLSFXDRDF 249
           +Y     SDI  W +K    +L    + S L  I K     GP L  + D  F
Sbjct: 60  DYKNNYPSDIDQWHDKIFVTMLRYNGVPSSLNVISKKVGDGGPLLQPYPDWSF 112


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +1

Query: 91  EYSETMESDILNWGNKEVEELLHKENISSCLIXICKTHDIDGPCLLSFXDRDF 249
           +Y     SDI  W +K    +L    + S L  I K     GP L  + D  F
Sbjct: 60  DYKNNYPSDIDQWHDKIFVTMLRYNGVPSSLNVISKKVGDGGPLLQPYPDWSF 112


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 25.0 bits (52), Expect = 0.70
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -1

Query: 367 RSSHRPSSIIAERLCLCSFFTS-KINLFLSPSFN 269
           +S   PS++    L +C FF   K  +F+  SFN
Sbjct: 77  KSLRTPSNMFVVNLAICDFFMMIKTPIFIYNSFN 110


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 451 HYHLLGIPNVYQAILP 498
           H+H + +PNVY  I P
Sbjct: 129 HFHNIIMPNVYIRIFP 144


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 451 HYHLLGIPNVYQAILP 498
           H+H + +PNVY  I P
Sbjct: 129 HFHNIIMPNVYIRIFP 144


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +1

Query: 97  SETMESDILNWGNKEVEELLHKEN 168
           S +  SD+L   NKE E+ ++++N
Sbjct: 150 SNSSNSDVLFKQNKEEEQTINRKN 173


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 262 KGWYGNRDXQTIAGTVRL 209
           + W+     QT+A TVR+
Sbjct: 188 RNWFSKNVNQTVAETVRI 205


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +1

Query: 130 GNKEVEELLHKENISSCLIXICKTHDIDGPCL 225
           G K V ELL  EN    L+  C T   + P L
Sbjct: 83  GIKAVMELLIDENSVKQLVSDCSTISEENPHL 114


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,451
Number of Sequences: 438
Number of extensions: 4026
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)