Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0813
         (706 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g32200.1 68417.m04582 DNA-binding HORMA domain-containing pro...    31   0.56 
At5g09700.1 68418.m01124 glycosyl hydrolase family 3 protein con...    31   0.74 
At3g20550.1 68416.m02601 forkhead-associated domain-containing p...    29   3.0  
At2g40950.1 68415.m05056 bZIP transcription factor family protei...    29   4.0  
At4g28050.1 68417.m04024 senescence-associated protein, putative...    27   9.2  

>At4g32200.1 68417.m04582 DNA-binding HORMA domain-containing
           protein similar to meiotic asynaptic mutant 1
           [Arabidopsis thaliana] GI:7939627, aysnaptic 1 [Brassica
           oleracea var. alboglabra] GI:23506946; contains Pfam
           profile PF02301: HORMA domain
          Length = 1399

 Score = 31.5 bits (68), Expect = 0.56
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +1

Query: 118 ILNWGNKEVEELLHKENISSCLIXICKTHDIDGPCL 225
           ++ W  K V + LHK+++   +  IC+T  +DGP +
Sbjct: 64  LIGWMEKGVYDALHKKHLKKLIFYICET--VDGPLI 97


>At5g09700.1 68418.m01124 glycosyl hydrolase family 3 protein
           contains Pfam profile PF01915: Glycosyl hydrolase family
           3 C terminal domain
          Length = 411

 Score = 31.1 bits (67), Expect = 0.74
 Identities = 21/65 (32%), Positives = 33/65 (50%)
 Frame = -2

Query: 492 DSLIHIRYSQQMIMHXEFYCGDHNLNVTNXCQEN*C**LDLLGHHIDRAPS*RSDCVFVV 313
           D L +  +S Q+I   +F     NL+ +  C+   C  LD +G H ++A   RSD  F V
Sbjct: 266 DGLSYTNFSHQLIKAPKFV--SLNLDESQSCRSPECQSLDAIGPHCEKAVGERSD--FEV 321

Query: 312 SSRVK 298
             +V+
Sbjct: 322 QLKVR 326


>At3g20550.1 68416.m02601 forkhead-associated domain-containing
           protein / FHA domain-containing protein weak similarity
           to SP|Q28147 Nuclear inhibitor of protein phosphatase-1
           (NIPP-1) (Protein phosphatase 1, regulatory inhibitor
           subunit 8) {Bos taurus}; contains Pfam profile PF00498:
           FHA domain
          Length = 314

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 52  NVSWIFVPPIKLEEYSETMESDILNWGNKEVEELLHKEN 168
           N ++I   PI+ + Y E  E D + +GN   E +L  EN
Sbjct: 273 NKTYINESPIEPQRYYELFEKDTIKFGNSSREYVLLHEN 311


>At2g40950.1 68415.m05056 bZIP transcription factor family protein
           similar to AtbZIP transcription factor GI:17065880 from
           [Arabidopsis thaliana]; contains Pfam profile: bZIP
           transcription factor PF00170
          Length = 721

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -1

Query: 229 IAGTVRLYRAFYIXLLNSWKYSLYVIILPLLCXPNL 122
           I G   L R F + LL+S KY  Y  +LP    P+L
Sbjct: 683 IGGPKSLSRVFVVVLLDSAKYVTYSCVLPRSGAPHL 718


>At4g28050.1 68417.m04024 senescence-associated protein, putative
           similar to senescence-associated protein 5 [Hemerocallis
           hybrid cultivar] gi|3551954|gb|AAC34855
          Length = 263

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = +1

Query: 94  YSETMESDILNWGNKEVEELLHKENISSCLI--XICKTH 204
           Y E   +D  NW  K V    + E I SCL+   +C T+
Sbjct: 110 YKEYHVADYSNWLQKRVNNAKNWERIRSCLMYSDVCSTY 148


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,523,190
Number of Sequences: 28952
Number of extensions: 272303
Number of successful extensions: 689
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1516419560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)