BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0813 (706 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g32200.1 68417.m04582 DNA-binding HORMA domain-containing pro... 31 0.56 At5g09700.1 68418.m01124 glycosyl hydrolase family 3 protein con... 31 0.74 At3g20550.1 68416.m02601 forkhead-associated domain-containing p... 29 3.0 At2g40950.1 68415.m05056 bZIP transcription factor family protei... 29 4.0 At4g28050.1 68417.m04024 senescence-associated protein, putative... 27 9.2 >At4g32200.1 68417.m04582 DNA-binding HORMA domain-containing protein similar to meiotic asynaptic mutant 1 [Arabidopsis thaliana] GI:7939627, aysnaptic 1 [Brassica oleracea var. alboglabra] GI:23506946; contains Pfam profile PF02301: HORMA domain Length = 1399 Score = 31.5 bits (68), Expect = 0.56 Identities = 12/36 (33%), Positives = 22/36 (61%) Frame = +1 Query: 118 ILNWGNKEVEELLHKENISSCLIXICKTHDIDGPCL 225 ++ W K V + LHK+++ + IC+T +DGP + Sbjct: 64 LIGWMEKGVYDALHKKHLKKLIFYICET--VDGPLI 97 >At5g09700.1 68418.m01124 glycosyl hydrolase family 3 protein contains Pfam profile PF01915: Glycosyl hydrolase family 3 C terminal domain Length = 411 Score = 31.1 bits (67), Expect = 0.74 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = -2 Query: 492 DSLIHIRYSQQMIMHXEFYCGDHNLNVTNXCQEN*C**LDLLGHHIDRAPS*RSDCVFVV 313 D L + +S Q+I +F NL+ + C+ C LD +G H ++A RSD F V Sbjct: 266 DGLSYTNFSHQLIKAPKFV--SLNLDESQSCRSPECQSLDAIGPHCEKAVGERSD--FEV 321 Query: 312 SSRVK 298 +V+ Sbjct: 322 QLKVR 326 >At3g20550.1 68416.m02601 forkhead-associated domain-containing protein / FHA domain-containing protein weak similarity to SP|Q28147 Nuclear inhibitor of protein phosphatase-1 (NIPP-1) (Protein phosphatase 1, regulatory inhibitor subunit 8) {Bos taurus}; contains Pfam profile PF00498: FHA domain Length = 314 Score = 29.1 bits (62), Expect = 3.0 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = +1 Query: 52 NVSWIFVPPIKLEEYSETMESDILNWGNKEVEELLHKEN 168 N ++I PI+ + Y E E D + +GN E +L EN Sbjct: 273 NKTYINESPIEPQRYYELFEKDTIKFGNSSREYVLLHEN 311 >At2g40950.1 68415.m05056 bZIP transcription factor family protein similar to AtbZIP transcription factor GI:17065880 from [Arabidopsis thaliana]; contains Pfam profile: bZIP transcription factor PF00170 Length = 721 Score = 28.7 bits (61), Expect = 4.0 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = -1 Query: 229 IAGTVRLYRAFYIXLLNSWKYSLYVIILPLLCXPNL 122 I G L R F + LL+S KY Y +LP P+L Sbjct: 683 IGGPKSLSRVFVVVLLDSAKYVTYSCVLPRSGAPHL 718 >At4g28050.1 68417.m04024 senescence-associated protein, putative similar to senescence-associated protein 5 [Hemerocallis hybrid cultivar] gi|3551954|gb|AAC34855 Length = 263 Score = 27.5 bits (58), Expect = 9.2 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 2/39 (5%) Frame = +1 Query: 94 YSETMESDILNWGNKEVEELLHKENISSCLI--XICKTH 204 Y E +D NW K V + E I SCL+ +C T+ Sbjct: 110 YKEYHVADYSNWLQKRVNNAKNWERIRSCLMYSDVCSTY 148 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,523,190 Number of Sequences: 28952 Number of extensions: 272303 Number of successful extensions: 689 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 669 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 689 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1516419560 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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