BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0812 (676 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161 65 4e-11 02_04_0074 - 19474786-19474812,19475174-19475400,19476362-194764... 53 2e-07 01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129 53 2e-07 07_01_1001 - 8460467-8460799 52 3e-07 07_03_0321 + 16757414-16757743 51 7e-07 01_06_0098 - 26416768-26416998 33 0.21 05_05_0189 + 23106165-23106341,23106606-23107598,23107694-23109013 29 3.4 08_02_1093 - 24271826-24273427 28 5.9 >05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161 Length = 113 Score = 65.3 bits (152), Expect = 4e-11 Identities = 28/55 (50%), Positives = 44/55 (80%) Frame = +1 Query: 100 MRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264 M+ +AAYLLAVLGG T+P+A ++ IL SVG+EA+ E+L+ +++EL GKD+ ++ Sbjct: 1 MKLIAAYLLAVLGGNTSPSADDIKNILESVGVEANDERLEFLLSELEGKDITEVI 55 Score = 30.3 bits (65), Expect = 1.5 Identities = 12/18 (66%), Positives = 16/18 (88%) Frame = +3 Query: 255 QLIAAGREKLSSMPVGGG 308 ++IAAGREK +S+P GGG Sbjct: 53 EVIAAGREKFASVPSGGG 70 >02_04_0074 - 19474786-19474812,19475174-19475400,19476362-19476496, 19478662-19479193 Length = 306 Score = 53.2 bits (122), Expect = 2e-07 Identities = 22/56 (39%), Positives = 38/56 (67%) Frame = +1 Query: 97 KMRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264 +M++++AYLLA L G P+A + IL SVG E D K++ ++++L GKD+ ++ Sbjct: 193 RMKFISAYLLATLAGNPNPSAEDLTTILESVGAEVDHGKMELLLSQLAGKDITEII 248 Score = 29.9 bits (64), Expect = 1.9 Identities = 11/18 (61%), Positives = 16/18 (88%) Frame = +3 Query: 255 QLIAAGREKLSSMPVGGG 308 ++IA+GREK +S+P GGG Sbjct: 246 EIIASGREKFASVPCGGG 263 >01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129 Length = 114 Score = 52.8 bits (121), Expect = 2e-07 Identities = 21/55 (38%), Positives = 39/55 (70%) Frame = +1 Query: 100 MRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264 M++++AYL+A L G ++P A + IL SVG E D K++ ++++++GKD+ L+ Sbjct: 1 MKFISAYLMAYLAGNSSPTAEDLTTILESVGCEIDNAKMELLLSQVSGKDITELI 55 Score = 29.9 bits (64), Expect = 1.9 Identities = 12/18 (66%), Positives = 15/18 (83%) Frame = +3 Query: 255 QLIAAGREKLSSMPVGGG 308 +LIA GREK +S+P GGG Sbjct: 53 ELIACGREKFASVPSGGG 70 >07_01_1001 - 8460467-8460799 Length = 110 Score = 52.4 bits (120), Expect = 3e-07 Identities = 23/55 (41%), Positives = 35/55 (63%) Frame = +1 Query: 100 MRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264 MR+VAAYL+A +GG +P V IL +VG + D +KL + ++ GKD+ +L Sbjct: 1 MRFVAAYLMATIGGNASPTKDDVRAILGAVGADVDEDKLGYLFDQVAGKDLSEIL 55 >07_03_0321 + 16757414-16757743 Length = 109 Score = 51.2 bits (117), Expect = 7e-07 Identities = 23/55 (41%), Positives = 35/55 (63%) Frame = +1 Query: 100 MRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264 MR+VAAYL+A +GG +P V IL +VG + D +KL + ++ GKD+ +L Sbjct: 1 MRFVAAYLMATIGGNASPTKDDVRAILGAVGADIDEDKLGYLFDQVAGKDLAEIL 55 >01_06_0098 - 26416768-26416998 Length = 76 Score = 33.1 bits (72), Expect = 0.21 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = +1 Query: 151 PAAAXVEKILSSVGIEADAEKLKKVITELNGKD-VDNLLRPD 273 P V KI+ +V IEAD+ + K ++ L GKD V RPD Sbjct: 16 PPPPAVVKIIETVHIEADSAEFKSIVQRLTGKDAVAGGPRPD 57 >05_05_0189 + 23106165-23106341,23106606-23107598,23107694-23109013 Length = 829 Score = 29.1 bits (62), Expect = 3.4 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = -3 Query: 269 GRNKLSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTASKYAA 111 G + LS SLPL V L + + + L+ G++L PS S++AA Sbjct: 22 GGSPLSASLPLLGVQLVLIVAVTRVLYFLLKPLKQPRVGGIILGPSVLSRHAA 74 >08_02_1093 - 24271826-24273427 Length = 533 Score = 28.3 bits (60), Expect = 5.9 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +1 Query: 97 KMRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKD 249 + R AA +AV G+TT AAA + SS G + ++ + L +D Sbjct: 3 RKREAAAAAVAVADGETTTAAARADSSSSSEGGSVCDDVVRNIFARLPARD 53 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,093,585 Number of Sequences: 37544 Number of extensions: 200090 Number of successful extensions: 443 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 434 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 443 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1714968940 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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