Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0812
         (676 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.)               71   7e-13
SB_58963| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.4  
SB_56647| Best HMM Match : rve (HMM E-Value=1.5e-10)                   29   4.5  
SB_18915| Best HMM Match : Pox_A32 (HMM E-Value=0.052)                 28   6.0  
SB_59010| Best HMM Match : rve (HMM E-Value=0.0052)                    28   7.9  
SB_45869| Best HMM Match : ANF_receptor (HMM E-Value=0)                28   7.9  
SB_26683| Best HMM Match : UPF0154 (HMM E-Value=7.3)                   28   7.9  
SB_4600| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   7.9  
SB_44110| Best HMM Match : DUF489 (HMM E-Value=3.3)                    28   7.9  
SB_3752| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   7.9  

>SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 762

 Score = 71.3 bits (167), Expect = 7e-13
 Identities = 33/56 (58%), Positives = 43/56 (76%)
 Frame = +1

Query: 100 MRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLLR 267
           MRYVAAYLLA LG    P+A  ++ IL SVGIE+D E+L KVI+EL+GK VD +++
Sbjct: 650 MRYVAAYLLATLGNNKNPSAKDIKGILDSVGIESDMERLNKVISELSGKSVDEIIQ 705


>SB_58963| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 218

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 148 TPAAAXVEKILSSVGIEADAEKLKKVITELN 240
           TP+ A ++ IL   G E   EK+K ++TE N
Sbjct: 106 TPSKADMKAILHDYGAELSEEKMKDLLTENN 136


>SB_56647| Best HMM Match : rve (HMM E-Value=1.5e-10)
          Length = 1347

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 148 TPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNL 261
           TP+ A ++ IL   G E   EK+K+ +  L  K   NL
Sbjct: 546 TPSKADMKAILHDYGAELSEEKMKEYMKALKTKKFSNL 583


>SB_18915| Best HMM Match : Pox_A32 (HMM E-Value=0.052)
          Length = 430

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 148 TPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNL 261
           TP+ A ++ IL   G E  AEK+K+ +  L  K    L
Sbjct: 298 TPSKADMKAILHDYGAELSAEKMKEYMKALKTKKFSKL 335


>SB_59010| Best HMM Match : rve (HMM E-Value=0.0052)
          Length = 935

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +1

Query: 148 TPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDN 258
           TP+ A ++ IL   G E   EK+K+ +  L  K+  N
Sbjct: 308 TPSKADMKAILHDYGAELSEEKMKEYMKALKTKNFSN 344


>SB_45869| Best HMM Match : ANF_receptor (HMM E-Value=0)
          Length = 939

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 47  TNVILSALHVSCQLGLKKCVTWPRIYWLCW 136
           T V+LSA  V    GL  C+  P++Y + W
Sbjct: 854 TTVVLSATTVIAASGLLVCMFIPKVYIILW 883


>SB_26683| Best HMM Match : UPF0154 (HMM E-Value=7.3)
          Length = 419

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +1

Query: 148 TPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNL 261
           TP+ A ++ IL   G E   EK+KK +  L  K    L
Sbjct: 367 TPSKAYMKAILHDYGAELSEEKMKKYMKALKTKKFSKL 404


>SB_4600| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1140

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +1

Query: 148 TPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNL-LRPDVR 279
           TP+ A ++ IL   G E   EK+K+ +  L  K V  +  RP +R
Sbjct: 666 TPSKADMKAILHDYGAELSEEKMKEYMKALKTKKVSAVNHRPRIR 710


>SB_44110| Best HMM Match : DUF489 (HMM E-Value=3.3)
          Length = 491

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 148 TPAAAXVEKILSSVGIEADAEKLKKVITELNGK 246
           TP+ A ++ IL   G E   EK+K+ +  LN K
Sbjct: 447 TPSKADMKAILHDYGAELSEEKMKEYMKALNTK 479


>SB_3752| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1048

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +1

Query: 148 TPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNL 261
           TP+ A ++ IL   G+E   EK+K+ +  L  K    L
Sbjct: 544 TPSKADMKAILHDYGVELSEEKMKEYMKALKTKKFSKL 581


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,018,655
Number of Sequences: 59808
Number of extensions: 219610
Number of successful extensions: 650
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)