BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0812 (676 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 7e-13 SB_58963| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4 SB_56647| Best HMM Match : rve (HMM E-Value=1.5e-10) 29 4.5 SB_18915| Best HMM Match : Pox_A32 (HMM E-Value=0.052) 28 6.0 SB_59010| Best HMM Match : rve (HMM E-Value=0.0052) 28 7.9 SB_45869| Best HMM Match : ANF_receptor (HMM E-Value=0) 28 7.9 SB_26683| Best HMM Match : UPF0154 (HMM E-Value=7.3) 28 7.9 SB_4600| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9 SB_44110| Best HMM Match : DUF489 (HMM E-Value=3.3) 28 7.9 SB_3752| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9 >SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 762 Score = 71.3 bits (167), Expect = 7e-13 Identities = 33/56 (58%), Positives = 43/56 (76%) Frame = +1 Query: 100 MRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLLR 267 MRYVAAYLLA LG P+A ++ IL SVGIE+D E+L KVI+EL+GK VD +++ Sbjct: 650 MRYVAAYLLATLGNNKNPSAKDIKGILDSVGIESDMERLNKVISELSGKSVDEIIQ 705 >SB_58963| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 218 Score = 29.1 bits (62), Expect = 3.4 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +1 Query: 148 TPAAAXVEKILSSVGIEADAEKLKKVITELN 240 TP+ A ++ IL G E EK+K ++TE N Sbjct: 106 TPSKADMKAILHDYGAELSEEKMKDLLTENN 136 >SB_56647| Best HMM Match : rve (HMM E-Value=1.5e-10) Length = 1347 Score = 28.7 bits (61), Expect = 4.5 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +1 Query: 148 TPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNL 261 TP+ A ++ IL G E EK+K+ + L K NL Sbjct: 546 TPSKADMKAILHDYGAELSEEKMKEYMKALKTKKFSNL 583 >SB_18915| Best HMM Match : Pox_A32 (HMM E-Value=0.052) Length = 430 Score = 28.3 bits (60), Expect = 6.0 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +1 Query: 148 TPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNL 261 TP+ A ++ IL G E AEK+K+ + L K L Sbjct: 298 TPSKADMKAILHDYGAELSAEKMKEYMKALKTKKFSKL 335 >SB_59010| Best HMM Match : rve (HMM E-Value=0.0052) Length = 935 Score = 27.9 bits (59), Expect = 7.9 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +1 Query: 148 TPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDN 258 TP+ A ++ IL G E EK+K+ + L K+ N Sbjct: 308 TPSKADMKAILHDYGAELSEEKMKEYMKALKTKNFSN 344 >SB_45869| Best HMM Match : ANF_receptor (HMM E-Value=0) Length = 939 Score = 27.9 bits (59), Expect = 7.9 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +2 Query: 47 TNVILSALHVSCQLGLKKCVTWPRIYWLCW 136 T V+LSA V GL C+ P++Y + W Sbjct: 854 TTVVLSATTVIAASGLLVCMFIPKVYIILW 883 >SB_26683| Best HMM Match : UPF0154 (HMM E-Value=7.3) Length = 419 Score = 27.9 bits (59), Expect = 7.9 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = +1 Query: 148 TPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNL 261 TP+ A ++ IL G E EK+KK + L K L Sbjct: 367 TPSKAYMKAILHDYGAELSEEKMKKYMKALKTKKFSKL 404 >SB_4600| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1140 Score = 27.9 bits (59), Expect = 7.9 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = +1 Query: 148 TPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNL-LRPDVR 279 TP+ A ++ IL G E EK+K+ + L K V + RP +R Sbjct: 666 TPSKADMKAILHDYGAELSEEKMKEYMKALKTKKVSAVNHRPRIR 710 >SB_44110| Best HMM Match : DUF489 (HMM E-Value=3.3) Length = 491 Score = 27.9 bits (59), Expect = 7.9 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +1 Query: 148 TPAAAXVEKILSSVGIEADAEKLKKVITELNGK 246 TP+ A ++ IL G E EK+K+ + LN K Sbjct: 447 TPSKADMKAILHDYGAELSEEKMKEYMKALNTK 479 >SB_3752| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1048 Score = 27.9 bits (59), Expect = 7.9 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = +1 Query: 148 TPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNL 261 TP+ A ++ IL G+E EK+K+ + L K L Sbjct: 544 TPSKADMKAILHDYGVELSEEKMKEYMKALKTKKFSKL 581 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,018,655 Number of Sequences: 59808 Number of extensions: 219610 Number of successful extensions: 650 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 618 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 650 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 1733301648 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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