Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0812
(676 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic ri... 76 1e-13
CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein. 76 1e-13
CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein. 76 1e-13
BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, larg... 76 1e-13
BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, larg... 76 1e-13
BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, larg... 76 1e-13
BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, larg... 76 1e-13
AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2 pr... 76 1e-13
AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens ... 31 4.9
AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting pro... 31 4.9
AB051471-1|BAB21775.1| 762|Homo sapiens KIAA1684 protein protein. 31 4.9
BC009431-1|AAH09431.1| 559|Homo sapiens family with sequence si... 30 8.6
AY358207-1|AAQ88574.1| 559|Homo sapiens WTNF5791 protein. 30 8.6
AK054664-1|BAB70787.1| 559|Homo sapiens protein ( Homo sapiens ... 30 8.6
>M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P2 mRNA, complete cds. ).
Length = 115
Score = 76.2 bits (179), Expect = 1e-13
Identities = 33/55 (60%), Positives = 48/55 (87%)
Frame = +1
Query: 100 MRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264
MRYVA+YLLA LGG ++P+A ++KIL SVGIEAD ++L KVI+ELNGK++++++
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVI 55
>CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 76.2 bits (179), Expect = 1e-13
Identities = 33/55 (60%), Positives = 48/55 (87%)
Frame = +1
Query: 100 MRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264
MRYVA+YLLA LGG ++P+A ++KIL SVGIEAD ++L KVI+ELNGK++++++
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVI 55
>CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 76.2 bits (179), Expect = 1e-13
Identities = 33/55 (60%), Positives = 48/55 (87%)
Frame = +1
Query: 100 MRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264
MRYVA+YLLA LGG ++P+A ++KIL SVGIEAD ++L KVI+ELNGK++++++
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVI 55
>BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 76.2 bits (179), Expect = 1e-13
Identities = 33/55 (60%), Positives = 48/55 (87%)
Frame = +1
Query: 100 MRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264
MRYVA+YLLA LGG ++P+A ++KIL SVGIEAD ++L KVI+ELNGK++++++
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVI 55
>BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 76.2 bits (179), Expect = 1e-13
Identities = 33/55 (60%), Positives = 48/55 (87%)
Frame = +1
Query: 100 MRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264
MRYVA+YLLA LGG ++P+A ++KIL SVGIEAD ++L KVI+ELNGK++++++
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVI 55
>BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 76.2 bits (179), Expect = 1e-13
Identities = 33/55 (60%), Positives = 48/55 (87%)
Frame = +1
Query: 100 MRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264
MRYVA+YLLA LGG ++P+A ++KIL SVGIEAD ++L KVI+ELNGK++++++
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVI 55
>BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 76.2 bits (179), Expect = 1e-13
Identities = 33/55 (60%), Positives = 48/55 (87%)
Frame = +1
Query: 100 MRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264
MRYVA+YLLA LGG ++P+A ++KIL SVGIEAD ++L KVI+ELNGK++++++
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVI 55
>AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2
protein.
Length = 115
Score = 76.2 bits (179), Expect = 1e-13
Identities = 33/55 (60%), Positives = 48/55 (87%)
Frame = +1
Query: 100 MRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264
MRYVA+YLLA LGG ++P+A ++KIL SVGIEAD ++L KVI+ELNGK++++++
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVI 55
>AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens
cDNA FLJ44709 fis, clone BRACE3019570, highly similar
to Rattus norvegicus SNAP-25-interacting protein (SNIP).
).
Length = 1012
Score = 30.7 bits (66), Expect = 4.9
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 139 GKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264
G TP V+K +S E D E+ + +T+ + KD++ LL
Sbjct: 765 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLL 806
>AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting protein
protein.
Length = 1183
Score = 30.7 bits (66), Expect = 4.9
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 139 GKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264
G TP V+K +S E D E+ + +T+ + KD++ LL
Sbjct: 893 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLL 934
>AB051471-1|BAB21775.1| 762|Homo sapiens KIAA1684 protein protein.
Length = 762
Score = 30.7 bits (66), Expect = 4.9
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 139 GKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264
G TP V+K +S E D E+ + +T+ + KD++ LL
Sbjct: 472 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLL 513
>BC009431-1|AAH09431.1| 559|Homo sapiens family with sequence
similarity 55, member C protein.
Length = 559
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 73 RFVSIRT*KMRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKV 225
RF ++ + ++ YVA L ++GGK T A V S+ +E +L+ +
Sbjct: 413 RFTTVFSNELHYVANELNGIVGGKNTVVAIAVWSHFSTFPLEVYIRRLRNI 463
>AY358207-1|AAQ88574.1| 559|Homo sapiens WTNF5791 protein.
Length = 559
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 73 RFVSIRT*KMRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKV 225
RF ++ + ++ YVA L ++GGK T A V S+ +E +L+ +
Sbjct: 413 RFTTVFSNELHYVANELNGIVGGKNTVVAIAVWSHFSTFPLEVYIRRLRNI 463
>AK054664-1|BAB70787.1| 559|Homo sapiens protein ( Homo sapiens
cDNA FLJ30102 fis, clone BNGH41000137, weakly similar to
BRUSH BORDER 61.9 KD PROTEIN PRECURSOR. ).
Length = 559
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 73 RFVSIRT*KMRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKV 225
RF ++ + ++ YVA L ++GGK T A V S+ +E +L+ +
Sbjct: 413 RFTTVFSNELHYVANELNGIVGGKNTVVAIAVWSHFSTFPLEVYIRRLRNI 463
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,877,435
Number of Sequences: 237096
Number of extensions: 1072118
Number of successful extensions: 1966
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1966
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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