BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0812 (676 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic ri... 76 1e-13 CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein. 76 1e-13 CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein. 76 1e-13 BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, larg... 76 1e-13 BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, larg... 76 1e-13 BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, larg... 76 1e-13 BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, larg... 76 1e-13 AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2 pr... 76 1e-13 AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens ... 31 4.9 AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting pro... 31 4.9 AB051471-1|BAB21775.1| 762|Homo sapiens KIAA1684 protein protein. 31 4.9 BC009431-1|AAH09431.1| 559|Homo sapiens family with sequence si... 30 8.6 AY358207-1|AAQ88574.1| 559|Homo sapiens WTNF5791 protein. 30 8.6 AK054664-1|BAB70787.1| 559|Homo sapiens protein ( Homo sapiens ... 30 8.6 >M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic ribosomal phosphoprotein P2 mRNA, complete cds. ). Length = 115 Score = 76.2 bits (179), Expect = 1e-13 Identities = 33/55 (60%), Positives = 48/55 (87%) Frame = +1 Query: 100 MRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264 MRYVA+YLLA LGG ++P+A ++KIL SVGIEAD ++L KVI+ELNGK++++++ Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVI 55 >CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein. Length = 115 Score = 76.2 bits (179), Expect = 1e-13 Identities = 33/55 (60%), Positives = 48/55 (87%) Frame = +1 Query: 100 MRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264 MRYVA+YLLA LGG ++P+A ++KIL SVGIEAD ++L KVI+ELNGK++++++ Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVI 55 >CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein. Length = 115 Score = 76.2 bits (179), Expect = 1e-13 Identities = 33/55 (60%), Positives = 48/55 (87%) Frame = +1 Query: 100 MRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264 MRYVA+YLLA LGG ++P+A ++KIL SVGIEAD ++L KVI+ELNGK++++++ Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVI 55 >BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, large, P2 protein. Length = 115 Score = 76.2 bits (179), Expect = 1e-13 Identities = 33/55 (60%), Positives = 48/55 (87%) Frame = +1 Query: 100 MRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264 MRYVA+YLLA LGG ++P+A ++KIL SVGIEAD ++L KVI+ELNGK++++++ Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVI 55 >BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, large, P2 protein. Length = 115 Score = 76.2 bits (179), Expect = 1e-13 Identities = 33/55 (60%), Positives = 48/55 (87%) Frame = +1 Query: 100 MRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264 MRYVA+YLLA LGG ++P+A ++KIL SVGIEAD ++L KVI+ELNGK++++++ Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVI 55 >BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, large, P2 protein. Length = 115 Score = 76.2 bits (179), Expect = 1e-13 Identities = 33/55 (60%), Positives = 48/55 (87%) Frame = +1 Query: 100 MRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264 MRYVA+YLLA LGG ++P+A ++KIL SVGIEAD ++L KVI+ELNGK++++++ Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVI 55 >BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, large, P2 protein. Length = 115 Score = 76.2 bits (179), Expect = 1e-13 Identities = 33/55 (60%), Positives = 48/55 (87%) Frame = +1 Query: 100 MRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264 MRYVA+YLLA LGG ++P+A ++KIL SVGIEAD ++L KVI+ELNGK++++++ Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVI 55 >AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2 protein. Length = 115 Score = 76.2 bits (179), Expect = 1e-13 Identities = 33/55 (60%), Positives = 48/55 (87%) Frame = +1 Query: 100 MRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264 MRYVA+YLLA LGG ++P+A ++KIL SVGIEAD ++L KVI+ELNGK++++++ Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVI 55 >AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens cDNA FLJ44709 fis, clone BRACE3019570, highly similar to Rattus norvegicus SNAP-25-interacting protein (SNIP). ). Length = 1012 Score = 30.7 bits (66), Expect = 4.9 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +1 Query: 139 GKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264 G TP V+K +S E D E+ + +T+ + KD++ LL Sbjct: 765 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLL 806 >AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting protein protein. Length = 1183 Score = 30.7 bits (66), Expect = 4.9 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +1 Query: 139 GKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264 G TP V+K +S E D E+ + +T+ + KD++ LL Sbjct: 893 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLL 934 >AB051471-1|BAB21775.1| 762|Homo sapiens KIAA1684 protein protein. Length = 762 Score = 30.7 bits (66), Expect = 4.9 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +1 Query: 139 GKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264 G TP V+K +S E D E+ + +T+ + KD++ LL Sbjct: 472 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLL 513 >BC009431-1|AAH09431.1| 559|Homo sapiens family with sequence similarity 55, member C protein. Length = 559 Score = 29.9 bits (64), Expect = 8.6 Identities = 15/51 (29%), Positives = 27/51 (52%) Frame = +1 Query: 73 RFVSIRT*KMRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKV 225 RF ++ + ++ YVA L ++GGK T A V S+ +E +L+ + Sbjct: 413 RFTTVFSNELHYVANELNGIVGGKNTVVAIAVWSHFSTFPLEVYIRRLRNI 463 >AY358207-1|AAQ88574.1| 559|Homo sapiens WTNF5791 protein. Length = 559 Score = 29.9 bits (64), Expect = 8.6 Identities = 15/51 (29%), Positives = 27/51 (52%) Frame = +1 Query: 73 RFVSIRT*KMRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKV 225 RF ++ + ++ YVA L ++GGK T A V S+ +E +L+ + Sbjct: 413 RFTTVFSNELHYVANELNGIVGGKNTVVAIAVWSHFSTFPLEVYIRRLRNI 463 >AK054664-1|BAB70787.1| 559|Homo sapiens protein ( Homo sapiens cDNA FLJ30102 fis, clone BNGH41000137, weakly similar to BRUSH BORDER 61.9 KD PROTEIN PRECURSOR. ). Length = 559 Score = 29.9 bits (64), Expect = 8.6 Identities = 15/51 (29%), Positives = 27/51 (52%) Frame = +1 Query: 73 RFVSIRT*KMRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKV 225 RF ++ + ++ YVA L ++GGK T A V S+ +E +L+ + Sbjct: 413 RFTTVFSNELHYVANELNGIVGGKNTVVAIAVWSHFSTFPLEVYIRRLRNI 463 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 70,877,435 Number of Sequences: 237096 Number of extensions: 1072118 Number of successful extensions: 1966 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 1892 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1966 length of database: 76,859,062 effective HSP length: 88 effective length of database: 55,994,614 effective search space used: 7615267504 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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