BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0812 (676 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical ... 64 7e-11 U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical pr... 52 3e-07 U53153-9|AAC69041.1| 511|Caenorhabditis elegans Hypothetical pr... 30 1.7 Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical pr... 29 4.0 Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical p... 29 4.0 U28971-9|AAK68669.1| 90|Caenorhabditis elegans Hypothetical pr... 28 5.3 AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical ... 27 9.2 >AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical protein Y62E10A.1 protein. Length = 110 Score = 64.5 bits (150), Expect = 7e-11 Identities = 30/55 (54%), Positives = 40/55 (72%) Frame = +1 Query: 100 MRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264 MRYV+AYLLAVLGG P ++ ILS+VG++ADAE K V++ L GK V+ L+ Sbjct: 1 MRYVSAYLLAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELI 55 >U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical protein C37A2.7 protein. Length = 107 Score = 52.4 bits (120), Expect = 3e-07 Identities = 22/55 (40%), Positives = 34/55 (61%) Frame = +1 Query: 100 MRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264 M+Y+ AYLLA LGG +P+A V K+L + G++ D E V+ L GK + ++ Sbjct: 1 MKYLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVI 55 >U53153-9|AAC69041.1| 511|Caenorhabditis elegans Hypothetical protein T19A5.5 protein. Length = 511 Score = 29.9 bits (64), Expect = 1.7 Identities = 14/43 (32%), Positives = 17/43 (39%) Frame = +2 Query: 5 FGTRFFLTC*RLFKTNVILSALHVSCQLGLKKCVTWPRIYWLC 133 FG C F+ + H CQ G +CV PR W C Sbjct: 33 FGIDSCRACAAFFRRVFVTHKQHFKCQTGQNQCVPDPRGRWNC 75 >Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical protein F25B3.1 protein. Length = 901 Score = 28.7 bits (61), Expect = 4.0 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%) Frame = +1 Query: 145 TTPAAAXVEKILSSVGIEADAEKLKKVITEL-NGKDVD 255 +TPA+A +I + GI EK+ +ITE+ N KD++ Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLE 481 >Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical protein F25B3.1 protein. Length = 901 Score = 28.7 bits (61), Expect = 4.0 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%) Frame = +1 Query: 145 TTPAAAXVEKILSSVGIEADAEKLKKVITEL-NGKDVD 255 +TPA+A +I + GI EK+ +ITE+ N KD++ Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLE 481 >U28971-9|AAK68669.1| 90|Caenorhabditis elegans Hypothetical protein B0244.11 protein. Length = 90 Score = 28.3 bits (60), Expect = 5.3 Identities = 19/55 (34%), Positives = 31/55 (56%) Frame = -3 Query: 305 ASYWH*RQLLTSGRNKLSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVL 141 AS +H + LL RN++ SLPL + F+S S+S+S P +F + + + L Sbjct: 17 ASRFHFKPLL---RNRV-LSLPLFQFVCFISGSSSSSFPYSQPVFISHTSLTIFL 67 >AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical protein Y44E3A.4 protein. Length = 511 Score = 27.5 bits (58), Expect = 9.2 Identities = 16/53 (30%), Positives = 27/53 (50%) Frame = -3 Query: 272 SGRNKLSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTASKYA 114 S +ST P+S+ + + + SIP+ S+ + + PPS+ASK A Sbjct: 432 SSPTSISTVNPMSASMFVPATAKEISIPSNSSATSSPFKSSSIAPPSSASKPA 484 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,290,309 Number of Sequences: 27780 Number of extensions: 175358 Number of successful extensions: 406 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 402 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 406 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1529108810 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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