Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0812
         (676 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical ...    64   7e-11
U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical pr...    52   3e-07
U53153-9|AAC69041.1|  511|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical p...    29   4.0  
U28971-9|AAK68669.1|   90|Caenorhabditis elegans Hypothetical pr...    28   5.3  
AF106589-3|AAT81179.1|  511|Caenorhabditis elegans Hypothetical ...    27   9.2  

>AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical
           protein Y62E10A.1 protein.
          Length = 110

 Score = 64.5 bits (150), Expect = 7e-11
 Identities = 30/55 (54%), Positives = 40/55 (72%)
 Frame = +1

Query: 100 MRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264
           MRYV+AYLLAVLGG   P    ++ ILS+VG++ADAE  K V++ L GK V+ L+
Sbjct: 1   MRYVSAYLLAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELI 55


>U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical
           protein C37A2.7 protein.
          Length = 107

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 22/55 (40%), Positives = 34/55 (61%)
 Frame = +1

Query: 100 MRYVAAYLLAVLGGKTTPAAAXVEKILSSVGIEADAEKLKKVITELNGKDVDNLL 264
           M+Y+ AYLLA LGG  +P+A  V K+L + G++ D E    V+  L GK +  ++
Sbjct: 1   MKYLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVI 55


>U53153-9|AAC69041.1|  511|Caenorhabditis elegans Hypothetical
           protein T19A5.5 protein.
          Length = 511

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 14/43 (32%), Positives = 17/43 (39%)
 Frame = +2

Query: 5   FGTRFFLTC*RLFKTNVILSALHVSCQLGLKKCVTWPRIYWLC 133
           FG      C   F+   +    H  CQ G  +CV  PR  W C
Sbjct: 33  FGIDSCRACAAFFRRVFVTHKQHFKCQTGQNQCVPDPRGRWNC 75


>Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +1

Query: 145 TTPAAAXVEKILSSVGIEADAEKLKKVITEL-NGKDVD 255
           +TPA+A   +I  + GI    EK+  +ITE+ N KD++
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLE 481


>Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +1

Query: 145 TTPAAAXVEKILSSVGIEADAEKLKKVITEL-NGKDVD 255
           +TPA+A   +I  + GI    EK+  +ITE+ N KD++
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLE 481


>U28971-9|AAK68669.1|   90|Caenorhabditis elegans Hypothetical
           protein B0244.11 protein.
          Length = 90

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 19/55 (34%), Positives = 31/55 (56%)
 Frame = -3

Query: 305 ASYWH*RQLLTSGRNKLSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVL 141
           AS +H + LL   RN++  SLPL   + F+S S+S+S P    +F +  +  + L
Sbjct: 17  ASRFHFKPLL---RNRV-LSLPLFQFVCFISGSSSSSFPYSQPVFISHTSLTIFL 67


>AF106589-3|AAT81179.1|  511|Caenorhabditis elegans Hypothetical
           protein Y44E3A.4 protein.
          Length = 511

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = -3

Query: 272 SGRNKLSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTASKYA 114
           S    +ST  P+S+ +   + +   SIP+     S+   +  + PPS+ASK A
Sbjct: 432 SSPTSISTVNPMSASMFVPATAKEISIPSNSSATSSPFKSSSIAPPSSASKPA 484


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,290,309
Number of Sequences: 27780
Number of extensions: 175358
Number of successful extensions: 406
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 406
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)