BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0811 (756 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_49350| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0 SB_29130| Best HMM Match : Vicilin_N (HMM E-Value=0.17) 29 4.1 SB_40219| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4 SB_56686| Best HMM Match : Cadherin (HMM E-Value=0) 28 7.1 SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4) 28 7.1 SB_51776| Best HMM Match : S-antigen (HMM E-Value=0.24) 28 9.4 SB_1872| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4 SB_13356| Best HMM Match : BACK (HMM E-Value=5.1e-16) 28 9.4 SB_10966| Best HMM Match : Peptidase_C48 (HMM E-Value=1.6) 28 9.4 >SB_49350| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 998 Score = 31.1 bits (67), Expect = 1.0 Identities = 20/57 (35%), Positives = 30/57 (52%) Frame = +2 Query: 23 PFKLFCVFSWRLYMPTEPQSPTPNSKTIFTTASSLPITTMPLKKSKQIYEDKKSEVI 193 P +L C F W + P + S +S+ + A SL TTM L +++ + KSEVI Sbjct: 131 PNELCCFFRWIIQGPKDFTSDDKSSE-VHKRALSLAQTTMSLTLTERQVRNTKSEVI 186 >SB_29130| Best HMM Match : Vicilin_N (HMM E-Value=0.17) Length = 355 Score = 29.1 bits (62), Expect = 4.1 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = +3 Query: 384 QQQRWQTCLRRWQGQDESKSQLEVRSSVGEQQ 479 QQQ+WQ R+WQ Q +SQLE + E Q Sbjct: 301 QQQQWQQQQRQWQ-QQLQQSQLEQQQRQQEMQ 331 >SB_40219| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 85 Score = 28.7 bits (61), Expect = 5.4 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = +2 Query: 548 PKTTWPTGSTASKVLRPNGP 607 P T+WP+ + +LRPN P Sbjct: 18 PNTSWPSHGAQTDILRPNNP 37 >SB_56686| Best HMM Match : Cadherin (HMM E-Value=0) Length = 1888 Score = 28.3 bits (60), Expect = 7.1 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = +2 Query: 50 WRLYMPTEPQSPTPNSKTIFTTASSLPITTMPLKKSKQIYEDKKSEVITN 199 W +P+ P +P P+ T T ASS T + SK +++ K V N Sbjct: 1413 WDSPIPSPPGTPDPSQVTRATAASSRQ-TGSQISLSKVAFQEDKGNVFKN 1461 >SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4) Length = 428 Score = 28.3 bits (60), Expect = 7.1 Identities = 16/58 (27%), Positives = 30/58 (51%) Frame = +1 Query: 61 YANGTSVSDSKLEDDLYNSILVADYDNAVEKKQTDLRGQEERSHHKCRKQTHTKQQDE 234 Y S SDS+ E++ + A E ++ D+R QEER+ K R ++ + + ++ Sbjct: 159 YGGSDSESDSESEEESPEEEKPRPHPVADEDERADVRRQEERTPLKRRSRSRSLRHED 216 >SB_51776| Best HMM Match : S-antigen (HMM E-Value=0.24) Length = 1669 Score = 27.9 bits (59), Expect = 9.4 Identities = 14/48 (29%), Positives = 22/48 (45%) Frame = +1 Query: 85 DSKLEDDLYNSILVADYDNAVEKKQTDLRGQEERSHHKCRKQTHTKQQ 228 DS +ED NSI D+ VE K ++ + K + HT+ + Sbjct: 733 DSVVEDGNPNSISTTAVDHGVENKSGNVENYSSKDKVKEKSMNHTRSR 780 >SB_1872| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1801 Score = 27.9 bits (59), Expect = 9.4 Identities = 20/62 (32%), Positives = 32/62 (51%) Frame = +2 Query: 41 VFSWRLYMPTEPQSPTPNSKTIFTTASSLPITTMPLKKSKQIYEDKKSEVITNVVNKLIR 220 V +W+ Y T+ NSK +F + SLP + P KSK+ E +K+ ++ VV + Sbjct: 755 VGTWKPY--TKHACVQDNSKRLFGSTLSLPESKSPKGKSKKKAE-QKTALLEYVVRHAVS 811 Query: 221 NN 226 N Sbjct: 812 AN 813 >SB_13356| Best HMM Match : BACK (HMM E-Value=5.1e-16) Length = 1155 Score = 27.9 bits (59), Expect = 9.4 Identities = 15/67 (22%), Positives = 33/67 (49%) Frame = +1 Query: 13 KMKTVQVILCLFVASLYANGTSVSDSKLEDDLYNSILVADYDNAVEKKQTDLRGQEERSH 192 K+ + VI+ L + + +N + S+ D+ ++I ++ +E T + +++ S Sbjct: 509 KLGVLNVIIDLAIGAYGSNNAVLLKSRRIIDVESTITLSSNRIVLENNNTGICREDDDSE 568 Query: 193 HKCRKQT 213 HKC T Sbjct: 569 HKCLNVT 575 >SB_10966| Best HMM Match : Peptidase_C48 (HMM E-Value=1.6) Length = 495 Score = 27.9 bits (59), Expect = 9.4 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = +1 Query: 175 QEERSHHKCRKQTHTKQ-QDELHGVRLPLWMQGSKDIVR 288 Q ER H K T TK+ QD+L R+ W +GS+ I R Sbjct: 28 QWERVHGKLLPNTATKRRQDQLAFFRIIAWKRGSRWIRR 66 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,639,248 Number of Sequences: 59808 Number of extensions: 383473 Number of successful extensions: 1307 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1213 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1306 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 2058295707 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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