BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0811 (756 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 26 1.4 AY903308-1|AAX48940.1| 241|Anopheles gambiae female-specific do... 25 1.9 AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific doub... 25 1.9 AY341206-1|AAR13770.1| 196|Anopheles gambiae SP14D1 protein. 24 4.4 DQ137802-1|AAZ78363.1| 265|Anopheles gambiae female-specific do... 23 7.7 DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific doub... 23 7.7 >AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule binding protein protein. Length = 838 Score = 25.8 bits (54), Expect = 1.4 Identities = 12/44 (27%), Positives = 20/44 (45%) Frame = +1 Query: 331 NIKLMXKRDGLALTLRDDSNNDGRLAYGDGKDKTSPKVSWKFVP 462 N+K+ K+ + R ++ ND + G K S K+ W P Sbjct: 680 NVKIETKKIDIKAAPRIEAKNDAYIPKGGDKKIISTKLQWNAKP 723 >AY903308-1|AAX48940.1| 241|Anopheles gambiae female-specific doublesex protein protein. Length = 241 Score = 25.4 bits (53), Expect = 1.9 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = +3 Query: 348 QARRSCFDVAR*QQQRWQTCLRRWQGQDESKS 443 Q + C R + QT LRR Q QDE ++ Sbjct: 66 QCEKCCLTAERQRVMALQTALRRAQTQDEQRA 97 >AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific doublesex protein protein. Length = 283 Score = 25.4 bits (53), Expect = 1.9 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = +3 Query: 348 QARRSCFDVAR*QQQRWQTCLRRWQGQDESKS 443 Q + C R + QT LRR Q QDE ++ Sbjct: 66 QCEKCCLTAERQRVMALQTALRRAQTQDEQRA 97 >AY341206-1|AAR13770.1| 196|Anopheles gambiae SP14D1 protein. Length = 196 Score = 24.2 bits (50), Expect = 4.4 Identities = 9/28 (32%), Positives = 15/28 (53%) Frame = +1 Query: 601 WTLQPAKYDNDVLFFMYNREYNEALVLS 684 + LQ + ND+ +NRE N + +S Sbjct: 39 YNLQDKSHHNDIALIRFNREINYSSTIS 66 >DQ137802-1|AAZ78363.1| 265|Anopheles gambiae female-specific doublesex protein protein. Length = 265 Score = 23.4 bits (48), Expect = 7.7 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = +3 Query: 357 RSCFDVAR*QQQRWQTCLRRWQGQDESKS 443 + C R + QT LRR Q QDE ++ Sbjct: 69 KCCLTAERQRVMALQTALRRAQTQDEQRA 97 >DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific doublesex protein protein. Length = 622 Score = 23.4 bits (48), Expect = 7.7 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = +3 Query: 357 RSCFDVAR*QQQRWQTCLRRWQGQDESKS 443 + C R + QT LRR Q QDE ++ Sbjct: 69 KCCLTAERQRVMALQTALRRAQTQDEQRA 97 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 676,334 Number of Sequences: 2352 Number of extensions: 11539 Number of successful extensions: 42 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 38 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 41 length of database: 563,979 effective HSP length: 63 effective length of database: 415,803 effective search space used: 78170964 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -