Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0811
         (756 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1390|AAF46539.1|  574|Drosophila melanogaster CG15252-P...    31   1.3  
AY051412-1|AAK92836.1|  555|Drosophila melanogaster GH09241p pro...    29   6.8  
AE014297-2164|AAF55286.3|  555|Drosophila melanogaster CG6126-PA...    29   6.8  

>AE014298-1390|AAF46539.1|  574|Drosophila melanogaster CG15252-PA
           protein.
          Length = 574

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
 Frame = +1

Query: 85  DSKLEDDLYNSILVADYDNAVEK-KQTDLRGQEERSHHKCRKQTHTKQQDELHGVRLPLW 261
           ++K++  L + +  A  D  + K KQ  +  ++ ++  K RKQ +   Q+E    ++P  
Sbjct: 218 EAKIDKALQHLLEQAGEDGVLAKAKQKVIHKRQIKNGTKQRKQENRNNQEEAEQRQIPEE 277

Query: 262 MQGSKDIVRECFPVEFTLIFAEN 330
           M+  K I+ E   + F   F EN
Sbjct: 278 MRIIKSILSEAHDLRFQEDFLEN 300


>AY051412-1|AAK92836.1|  555|Drosophila melanogaster GH09241p
           protein.
          Length = 555

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +1

Query: 13  KMKTVQVILCLFVASLYANGTSVSDSKLEDDLY 111
           +MKT+ V LC F  SL   G S+S  KL  + Y
Sbjct: 333 RMKTLNVCLCWFANSLVYYGLSLSAGKLYGNPY 365


>AE014297-2164|AAF55286.3|  555|Drosophila melanogaster CG6126-PA
           protein.
          Length = 555

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +1

Query: 13  KMKTVQVILCLFVASLYANGTSVSDSKLEDDLY 111
           +MKT+ V LC F  SL   G S+S  KL  + Y
Sbjct: 333 RMKTLNVCLCWFANSLVYYGLSLSAGKLYGNPY 365


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,706,955
Number of Sequences: 53049
Number of extensions: 568138
Number of successful extensions: 2312
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2312
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)