BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0810 (883 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_02_0492 - 10907529-10907629,10907714-10907953,10908035-109080... 30 2.8 10_02_0134 + 5667236-5669295,5669833-5669902,5670266-5670376 29 3.7 02_02_0490 - 10879761-10879861,10879946-10880185,10880274-108803... 29 3.7 06_01_0947 - 7303828-7304172,7304806-7304898,7304984-7305196,730... 29 6.5 12_01_0321 + 2447726-2447790,2448114-2448320,2449259-2449392,244... 28 8.6 11_04_0125 + 13723966-13724011,13724282-13724430,13725100-137251... 28 8.6 05_07_0170 - 28128839-28130149 28 8.6 04_01_0249 - 3284107-3286377 28 8.6 >02_02_0492 - 10907529-10907629,10907714-10907953,10908035-10908098, 10908416-10908721,10909347-10909561,10909656-10909950, 10910493-10910597,10911112-10911180,10911433-10911519, 10911953-10913704,10914964-10915054,10915217-10915488 Length = 1198 Score = 29.9 bits (64), Expect = 2.8 Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 1/61 (1%) Frame = +1 Query: 217 HREKLRQVHECRCVKQFMEMYKMG-MLPRGETFVHTNELQMEEAVKVFRVLYYAKDFDVF 393 HRE+ +V E C+K+ ME+ +G GE ++ + Q ++ +++ R LY +D D+F Sbjct: 630 HRERYEKVLEACCLKKDMEILPLGDQTIIGERGINLSGGQ-KQRMQIARALY--QDADIF 686 Query: 394 M 396 + Sbjct: 687 L 687 >10_02_0134 + 5667236-5669295,5669833-5669902,5670266-5670376 Length = 746 Score = 29.5 bits (63), Expect = 3.7 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = +1 Query: 19 GSSTTGLLGRGVSXSD*WWLRDDGLHQGTNG 111 GS T G +G G SD WW +D+G G+NG Sbjct: 369 GSRTGGTMGSGTG-SDWWWKQDNG--GGSNG 396 >02_02_0490 - 10879761-10879861,10879946-10880185,10880274-10880337, 10880426-10880731,10881098-10881312,10881417-10881711, 10882193-10882357,10882477-10882527,10882657-10883109, 10883195-10883281,10883736-10884800,10884858-10885376 Length = 1186 Score = 29.5 bits (63), Expect = 3.7 Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 1/61 (1%) Frame = +1 Query: 217 HREKLRQVHECRCVKQFMEMYKMG-MLPRGETFVHTNELQMEEAVKVFRVLYYAKDFDVF 393 HRE+ +V E C+K+ +E+ +G GE ++ + Q ++ +++ R LY +D D+F Sbjct: 453 HRERYEKVLEACCLKKDLEILPLGDQTIIGERGINLSGGQ-KQRIQIARALY--QDADIF 509 Query: 394 M 396 + Sbjct: 510 L 510 >06_01_0947 - 7303828-7304172,7304806-7304898,7304984-7305196, 7305318-7305409,7305726-7305818,7305871-7305955 Length = 306 Score = 28.7 bits (61), Expect = 6.5 Identities = 16/52 (30%), Positives = 23/52 (44%) Frame = +3 Query: 588 DPVLWKYYGITVTDDNLVVIDWRKGVRRSLSPNDVMSYFMGGRRPLTPTWYL 743 D L YG T DDN +V D G+ + N + + + P+ P W L Sbjct: 22 DEFLLSLYGFTQHDDNTLVADVVDGITQHSDHNQITNE-VRNHVPILPHWKL 72 >12_01_0321 + 2447726-2447790,2448114-2448320,2449259-2449392, 2449481-2449668,2450204-2450359 Length = 249 Score = 28.3 bits (60), Expect = 8.6 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = -1 Query: 841 CLVGVHHNLATTLLCLMPYASSVHPERIVSCGGKYHVGVKG 719 C+ HN ATT +C +P + E+++ C H G KG Sbjct: 209 CIQTRDHNFATTCVCRVP--KHLREEQVIEC---VHCGCKG 244 >11_04_0125 + 13723966-13724011,13724282-13724430,13725100-13725197, 13725321-13725528,13725678-13725695 Length = 172 Score = 28.3 bits (60), Expect = 8.6 Identities = 10/37 (27%), Positives = 23/37 (62%) Frame = +1 Query: 733 HGTYLHMKLSVLDEPTTHTALNKGASWRDYDVRQPSK 843 +G + ++ S+ EP H A+ G ++R+ ++ QP++ Sbjct: 11 NGAIVEVRNSMFKEPVLHDAIKIGVNFRNQELLQPAE 47 >05_07_0170 - 28128839-28130149 Length = 436 Score = 28.3 bits (60), Expect = 8.6 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = +3 Query: 669 RSLSPNDVMSYFMGGRRPLTPTWYLPPHETIRSG 770 R LSP +VMS+ R P TP W + + I +G Sbjct: 333 RCLSPTEVMSWDCKIRLPTTPPWLVSCNWNIYTG 366 >04_01_0249 - 3284107-3286377 Length = 756 Score = 28.3 bits (60), Expect = 8.6 Identities = 11/49 (22%), Positives = 28/49 (57%) Frame = +2 Query: 128 MKELCIMKLLDHILQPTMFEDIKEIAKEYNIEKSCDKYMNVDALSSSWR 274 + +L + ++LD+ +PT + + +YN+ C +Y + +A + +W+ Sbjct: 365 VSDLNLFRILDNNKKPTRYRMWSQTIGQYNLLHECTRYES-EARTKNWK 412 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 23,773,477 Number of Sequences: 37544 Number of extensions: 500663 Number of successful extensions: 1340 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1299 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1340 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2491484208 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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