BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0808 (803 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q6FK10 Cluster: DNA polymerase; n=1; Candida glabrata|R... 35 2.1 UniRef50_Q4YQN1 Cluster: Putative uncharacterized protein; n=1; ... 33 6.4 >UniRef50_Q6FK10 Cluster: DNA polymerase; n=1; Candida glabrata|Rep: DNA polymerase - Candida glabrata (Yeast) (Torulopsis glabrata) Length = 1481 Score = 35.1 bits (77), Expect = 2.1 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%) Frame = +2 Query: 278 NDHIWTSGNYQELFLGKAVPSLRILEKDFRRQTAHKPPSSL--NAFETADEVY 430 ND IW S + E+FL KA+ S+++ +KD + H + FE DE++ Sbjct: 338 NDMIWNSSHQFEMFLRKALSSVKVSDKDSNFLSGHFNANDFLKTPFEMIDELW 390 >UniRef50_Q4YQN1 Cluster: Putative uncharacterized protein; n=1; Plasmodium berghei|Rep: Putative uncharacterized protein - Plasmodium berghei Length = 120 Score = 33.5 bits (73), Expect = 6.4 Identities = 23/68 (33%), Positives = 30/68 (44%) Frame = +2 Query: 29 LFEIFGYLKVYNQFLIYNITYKIFWLHLMCILKTRKSHLSHFFINHLSSLYEVSCV*T*S 208 LF F LK Q I+N+ + L ILK H+ + F N + L +S V S Sbjct: 48 LFPRFQCLKKIKQIFIHNVNFLSIKSSLSFILKLHSLHIRYTFHNIIILLLNISLV--YS 105 Query: 209 FITFYWLR 232 F F W R Sbjct: 106 FHFFIWFR 113 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 707,571,982 Number of Sequences: 1657284 Number of extensions: 13424192 Number of successful extensions: 28598 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 27877 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 28591 length of database: 575,637,011 effective HSP length: 99 effective length of database: 411,565,895 effective search space used: 69143070360 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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