BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0808 (803 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_01_0539 + 3941189-3941896,3942110-3942394,3942508-3943394,394... 29 4.3 12_01_0983 - 9979572-9980570,9980878-9981544,9982864-9983217,998... 29 5.7 05_01_0355 - 2774217-2774318,2774608-2774775,2774872-2775090,277... 29 5.7 10_01_0330 + 3614562-3614574,3614676-3615118,3617700-3617825,361... 28 7.6 05_04_0223 - 19192411-19192951,19193363-19193388 28 7.6 06_03_0024 - 15563574-15563632,15563887-15563914,15564017-155642... 28 10.0 06_01_0460 + 3276855-3277967 28 10.0 >02_01_0539 + 3941189-3941896,3942110-3942394,3942508-3943394, 3943473-3943643,3943726-3943744,3943763-3944014, 3944100-3944138,3944244-3944282 Length = 799 Score = 29.1 bits (62), Expect = 4.3 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Frame = -1 Query: 437 IANIPHPQSRRHSRMMEA-YEQFAYESLSPEYEDWARPYP 321 +A P P++R H + A Y + +S+ PEYE + YP Sbjct: 354 LAYKPTPETRVHGAQLRADYAKVQVDSVKPEYELFPLKYP 393 >12_01_0983 - 9979572-9980570,9980878-9981544,9982864-9983217, 9983334-9983668 Length = 784 Score = 28.7 bits (61), Expect = 5.7 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +2 Query: 242 SSEFRCRNNQFANDHIWTSGNYQELFLGKAVPSLRILEKDFR 367 S +FRC +H G + LF+ +A+P LR L +FR Sbjct: 666 SHQFRCLKQFIFKNH---GGGLEMLFMQEAMPELRWLSLEFR 704 >05_01_0355 - 2774217-2774318,2774608-2774775,2774872-2775090, 2775176-2775319,2775485-2775767,2775874-2775929, 2776012-2776161,2776254-2776340,2776414-2776449, 2777100-2777162,2777247-2777327,2777407-2777496, 2777690-2777767,2777855-2778058,2778139-2778186, 2778262-2778447,2779879-2779978,2780121-2780260 Length = 744 Score = 28.7 bits (61), Expect = 5.7 Identities = 13/47 (27%), Positives = 24/47 (51%) Frame = +3 Query: 426 YISNDVVGVMSDRHAGHRWRRHIPRWRQAGSI*RLVDHRMWYIDRFF 566 YI++ V+ + D+H R + RW + R + +Y+DR+F Sbjct: 76 YITSMVLPSLRDKHDEFMLRELVKRWSNHKIMVRWLSRFFFYLDRYF 122 >10_01_0330 + 3614562-3614574,3614676-3615118,3617700-3617825, 3618379-3618786,3618871-3619311,3619399-3619779 Length = 603 Score = 28.3 bits (60), Expect = 7.6 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Frame = -1 Query: 437 IANIPHPQSRRHSRMMEA-YEQFAYESLSPEYEDWARPYP 321 +A P P++R H + A Y + +S+ PEYE + YP Sbjct: 500 LAYKPTPETRVHGVQLRADYAKVQVDSVKPEYELFPLKYP 539 >05_04_0223 - 19192411-19192951,19193363-19193388 Length = 188 Score = 28.3 bits (60), Expect = 7.6 Identities = 12/24 (50%), Positives = 17/24 (70%) Frame = +3 Query: 447 GVMSDRHAGHRWRRHIPRWRQAGS 518 G +S+R A RWRR +PR R+ G+ Sbjct: 59 GKLSNRTARWRWRRLVPRARRDGT 82 >06_03_0024 - 15563574-15563632,15563887-15563914,15564017-15564202, 15564283-15564332,15564435-15564691,15564772-15564910, 15565627-15565716,15567354-15567663 Length = 372 Score = 27.9 bits (59), Expect = 10.0 Identities = 14/46 (30%), Positives = 24/46 (52%) Frame = -3 Query: 678 RNISMXEGNLHGXLSLNVPKHSFIAKAIKRSPQVHAYRRTDLCTTS 541 + +SM + + +G SLN+ H FI K++ P + + TTS Sbjct: 281 QEVSMLDTSHNGTHSLNLISHLFIWKSLSSFPDQSVFCAVAISTTS 326 >06_01_0460 + 3276855-3277967 Length = 370 Score = 27.9 bits (59), Expect = 10.0 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Frame = -1 Query: 467 MSVAHHTYYVIANIPHPQSRRHSRM-MEAYEQFAYESLSPEYEDWARPYPKTVPDNFHLS 291 ++ A V+ + P P +R+ R+ +E + SL PE E P P T PD++ L+ Sbjct: 18 LTAAAAALLVLLDPPAPSARKRRRLDVEELDPVPPPSLQPEPEPL--PLPPTSPDHYPLA 75 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,884,466 Number of Sequences: 37544 Number of extensions: 367516 Number of successful extensions: 846 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 829 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 846 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2185924824 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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