Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0808
         (803 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_4668| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   1.4  
SB_57440| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.4  
SB_29714| Best HMM Match : 7tm_1 (HMM E-Value=3.3e-13)                 29   4.4  
SB_19664| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.8  
SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.7  
SB_37294| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.7  

>SB_4668| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 186

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 212 ITFYWLRISRSSEFRCRNNQFANDHIWTSGNY 307
           +TFYWL IS++   R +       H  TSG Y
Sbjct: 143 VTFYWLPISKTKTHRVQEYDHLQYHYNTSGQY 174


>SB_57440| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 673

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +2

Query: 83  ITYKIFWLHLMCILKTRKSHLSHFFINHLSSLYEVSCV*T*SFITFYW 226
           I     WL+++CI     S L++ F N   SLY +S       +  YW
Sbjct: 288 IVVAAIWLYVICITAVYNSPLAYHFAN--ISLYYISAHLLVGIVVIYW 333


>SB_29714| Best HMM Match : 7tm_1 (HMM E-Value=3.3e-13)
          Length = 473

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +2

Query: 83  ITYKIFWLHLMCILKTRKSHLSHFFINHLSSLYEVSCV*T*SFITFYW 226
           I     WL+++CI     S L++ F N   SLY +S       +  YW
Sbjct: 151 IVVAAIWLYVICITAVYNSPLAYHFAN--ISLYYISAHLLVGIVVIYW 196


>SB_19664| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 632

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 683 DFFINSGSSPXXQKWAPHQKS*FLVGTIKN 772
           +F  N G+ P  Q W P QKS F  G  K+
Sbjct: 382 NFHSNFGNMPSSQNWVPDQKSAFQSGQRKD 411


>SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3474

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 19/71 (26%), Positives = 32/71 (45%)
 Frame = +2

Query: 41   FGYLKVYNQFLIYNITYKIFWLHLMCILKTRKSHLSHFFINHLSSLYEVSCV*T*SFITF 220
            F Y+ + N      I   +F   L  ++  + SH+ HFF   + S Y+V      SF+T 
Sbjct: 2893 FDYIVMLNTIENVVIALVVFLNTLKLLIYCQFSHVKHFFQVLVKSFYDVG-----SFLTI 2947

Query: 221  YWLRISRSSEF 253
             +  I   ++F
Sbjct: 2948 LFFAIGAFAQF 2958


>SB_37294| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 243

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = -1

Query: 470 RMSVAHHTYYVIANIPHPQSRRHSRMMEAYEQFAY 366
           R  +  H +Y  +N+P P   RH  + +  E+ ++
Sbjct: 193 RFQLTDHVFYEESNVPSPAQARHENVSQLSEKHSF 227


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,129,501
Number of Sequences: 59808
Number of extensions: 443812
Number of successful extensions: 779
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2227723674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)