Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0808
         (803 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U49830-6|AAK31481.1|  964|Caenorhabditis elegans Neuronal igcam ...    33   0.32 
U49830-5|AAK31482.1| 1227|Caenorhabditis elegans Neuronal igcam ...    33   0.32 
U49830-4|AAU20850.1| 1196|Caenorhabditis elegans Neuronal igcam ...    33   0.32 
Z92973-4|CAE18004.2|  328|Caenorhabditis elegans Hypothetical pr...    30   1.7  
AL023842-7|CAA19518.3|  345|Caenorhabditis elegans Hypothetical ...    30   2.2  
AB108783-1|BAC75705.1|  345|Caenorhabditis elegans SDF-9 protein...    30   2.2  
AC006661-10|AAF39887.1|  843|Caenorhabditis elegans Hypothetical...    29   3.9  
AF068713-21|AAC17804.2|  163|Caenorhabditis elegans Hypothetical...    29   5.1  
AF067942-8|AAG45575.1|  349|Caenorhabditis elegans Serpentine re...    29   5.1  
AC006636-1|AAF39798.1|  163|Caenorhabditis elegans Hypothetical ...    29   5.1  
Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical pr...    28   6.8  

>U49830-6|AAK31481.1|  964|Caenorhabditis elegans Neuronal igcam
           protein 6, isoform a protein.
          Length = 964

 Score = 32.7 bits (71), Expect = 0.32
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -1

Query: 380 EQFAYESLSPEYEDWARPYPKTVPDNFHLSRYGHL 276
           E FAY S  P+Y+ W+R   K +P   H+S YG +
Sbjct: 139 ECFAYASPLPQYK-WSRVDGKPIPARSHISNYGRV 172


>U49830-5|AAK31482.1| 1227|Caenorhabditis elegans Neuronal igcam
           protein 6, isoform b protein.
          Length = 1227

 Score = 32.7 bits (71), Expect = 0.32
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -1

Query: 380 EQFAYESLSPEYEDWARPYPKTVPDNFHLSRYGHL 276
           E FAY S  P+Y+ W+R   K +P   H+S YG +
Sbjct: 402 ECFAYASPLPQYK-WSRVDGKPIPARSHISNYGRV 435


>U49830-4|AAU20850.1| 1196|Caenorhabditis elegans Neuronal igcam
           protein 6, isoform d protein.
          Length = 1196

 Score = 32.7 bits (71), Expect = 0.32
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -1

Query: 380 EQFAYESLSPEYEDWARPYPKTVPDNFHLSRYGHL 276
           E FAY S  P+Y+ W+R   K +P   H+S YG +
Sbjct: 371 ECFAYASPLPQYK-WSRVDGKPIPARSHISNYGRV 404


>Z92973-4|CAE18004.2|  328|Caenorhabditis elegans Hypothetical
           protein Y6G8.4 protein.
          Length = 328

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
 Frame = +2

Query: 26  ILFEIFGYLKVYNQFLIYNITYKIFWLHLMCILKTRKSHLSHFFINHLSSLYEVSCV*T* 205
           I+F +FG   V  QFL + +T ++F  H++  L   ++ L  FF    S L   +     
Sbjct: 101 IIFLLFGGAVVTIQFLAFIVTLQVF--HVLIFLIAIQNLLRFFFPLRFSLLKNSTDRYVK 158

Query: 206 SFITFYWLR-ISRSSEFRCRNNQFANDHIWTSGN 304
            F  F+  + I+    F   +N F   +IW +G+
Sbjct: 159 QFYIFFVSKEIACFLLFAACDNDFLPRNIWETGH 192


>AL023842-7|CAA19518.3|  345|Caenorhabditis elegans Hypothetical
           protein Y44A6D.4 protein.
          Length = 345

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 18/60 (30%), Positives = 25/60 (41%)
 Frame = -1

Query: 344 EDWARPYPKTVPDNFHLSRYGHLRIDYSCSGIHSXD*FVTNRML*KIMFTHMTLRIAKKG 165
           E+    Y K  PD   +  YGHL+++     IH  +    N +L K   TH  L     G
Sbjct: 109 EEKLEHYDKYFPDKGDVWSYGHLQVERKSYAIHQGNFHTRNFILRKGNETHRVLHFTVFG 168


>AB108783-1|BAC75705.1|  345|Caenorhabditis elegans SDF-9 protein
           protein.
          Length = 345

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 18/60 (30%), Positives = 25/60 (41%)
 Frame = -1

Query: 344 EDWARPYPKTVPDNFHLSRYGHLRIDYSCSGIHSXD*FVTNRML*KIMFTHMTLRIAKKG 165
           E+    Y K  PD   +  YGHL+++     IH  +    N +L K   TH  L     G
Sbjct: 109 EEKLEHYDKYFPDKGDVWSYGHLQVERKSYAIHQGNFHTRNFILRKGNETHRVLHFTVFG 168


>AC006661-10|AAF39887.1|  843|Caenorhabditis elegans Hypothetical
           protein H20J04.1 protein.
          Length = 843

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = +3

Query: 348 FWRKTFVGKLLISLHHP*MPSRLRMRYISNDVVGVMSDRHA 470
           +W+  F+G L+++ H   +P+ L  +++S +  G +  R A
Sbjct: 3   YWKLLFIGFLIVNCHDN-IPTSLTAQFVSGNATGAIVTRSA 42


>AF068713-21|AAC17804.2|  163|Caenorhabditis elegans Hypothetical
           protein T24A6.17 protein.
          Length = 163

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/61 (24%), Positives = 32/61 (52%)
 Frame = +2

Query: 134 KSHLSHFFINHLSSLYEVSCV*T*SFITFYWLRISRSSEFRCRNNQFANDHIWTSGNYQE 313
           KS ++HF  N+  ++ EV      + +T  +    +  +F  +NN F  ++++ +G Y+ 
Sbjct: 52  KSFVNHFIPNNFLNILEVLTFNKQAKLTVEFFCPGQFFDFFGKNNYFPKNYVYFAGEYKG 111

Query: 314 L 316
           L
Sbjct: 112 L 112


>AF067942-8|AAG45575.1|  349|Caenorhabditis elegans Serpentine
           receptor, class h protein62 protein.
          Length = 349

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +2

Query: 17  SI*ILFEIFGYLKVYNQFLIYNITYKIFWLHLMCI 121
           SI ILFE       +N+F I    YKI W+ L C+
Sbjct: 128 SITILFENRSSSISFNKFRISKRKYKILWIFLNCL 162


>AC006636-1|AAF39798.1|  163|Caenorhabditis elegans Hypothetical
           protein F40C5.2 protein.
          Length = 163

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/61 (24%), Positives = 32/61 (52%)
 Frame = +2

Query: 134 KSHLSHFFINHLSSLYEVSCV*T*SFITFYWLRISRSSEFRCRNNQFANDHIWTSGNYQE 313
           KS ++HF  N+  ++ EV      + +T  +    +  +F  +NN F  ++++ +G Y+ 
Sbjct: 52  KSFVNHFIPNNFLNILEVLTFNKQAKLTVEFFCPGQFFDFFGKNNYFPKNYVYFAGEYKG 111

Query: 314 L 316
           L
Sbjct: 112 L 112


>Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical
           protein C11E4.6 protein.
          Length = 1170

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -1

Query: 377 QFAYESLSPEYEDWARPYPKTVPDNFHL-SRYGHL 276
           Q AYESL     D  RP+P   P  FHL ++Y H+
Sbjct: 196 QSAYESLRVGTPDIKRPFPAIYP--FHLAAKYNHV 228


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,476,073
Number of Sequences: 27780
Number of extensions: 329337
Number of successful extensions: 702
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)