Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0807
         (736 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.6  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   5.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.8  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/55 (21%), Positives = 24/55 (43%)
 Frame = +2

Query: 350 GLAFTLSDNGGVAYGDSKDRTSSRVSWKFIPLWENNKVYFKIENTERKQNLALKS 514
           G+    SDN    Y  +  +    ++++    W +N+  + +    RK+   LKS
Sbjct: 186 GIKLNASDNDKDGYKRAVYKIGQLLTYRAPRPWIHNETIYSLTPQGRKEQKVLKS 240


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 12/55 (21%), Positives = 23/55 (41%)
 Frame = +2

Query: 350 GLAFTLSDNGGVAYGDSKDRTSSRVSWKFIPLWENNKVYFKIENTERKQNLALKS 514
           G+    SDN    Y  +  +    ++++    W  N+  + +    RK+   LKS
Sbjct: 186 GIKLNASDNDKDGYKRAVYKIGQLLTYRAPRPWIYNETIYSLTPQGRKEQKVLKS 240


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 563  MVLGPSGTWFPLN 601
            ++ GPS TWF  N
Sbjct: 1138 VIYGPSDTWFDEN 1150


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,632
Number of Sequences: 336
Number of extensions: 3095
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)