Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0807
         (736 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   3.2  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   5.6  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   5.6  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    23   9.8  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 19/70 (27%), Positives = 31/70 (44%)
 Frame = +2

Query: 200 QSDTKQQDELHGVRLPALVQGSEDIVRDCFPVEFTLILAENYVKLMYRRDGLAFTLSDNG 379
           Q   K QD L   +  AL    +D+V      +   +LA  + +L+  +  L  T+SD  
Sbjct: 258 QEIQKAQDRLKNAQ-KALKDAKKDVVT---AKDEKSVLATEHQQLLREKTKLDLTISDLS 313

Query: 380 GVAYGDSKDR 409
               GD+K +
Sbjct: 314 DEVQGDNKSK 323


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 11/47 (23%), Positives = 24/47 (51%)
 Frame = +3

Query: 45   ASLYADEGTAFNEILAEHLYNDVIIADYDSAVERSKLIYTDNKGXLI 185
            A L+        +I  +H+ +DV+++++ S +  S L  + N+   I
Sbjct: 1974 APLHRHRVENIQKISGDHILSDVLLSNHQSQIITSALYSSGNESLAI 2020


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 11/47 (23%), Positives = 24/47 (51%)
 Frame = +3

Query: 45   ASLYADEGTAFNEILAEHLYNDVIIADYDSAVERSKLIYTDNKGXLI 185
            A L+        +I  +H+ +DV+++++ S +  S L  + N+   I
Sbjct: 1975 APLHRHRVENIQKISGDHILSDVLLSNHQSQIITSALYSSGNESLAI 2021


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +2

Query: 434 FIPLWENNKVYFKIEN-TERKQN-LALKSEL 520
           F+P+W     YF + N TE  ++ L L+ EL
Sbjct: 161 FMPVWTTYSAYFAVRNSTEPVEHVLHLEEEL 191


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,138
Number of Sequences: 2352
Number of extensions: 13716
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)