Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0807
         (736 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127311-1|BAC86927.1|  223|Homo sapiens protein ( Homo sapiens ...    33   1.1  
AK125299-1|BAC86118.1|  252|Homo sapiens protein ( Homo sapiens ...    30   9.9  

>AK127311-1|BAC86927.1|  223|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45380 fis, clone BRHIP3020733. ).
          Length = 223

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +1

Query: 232 WSTPTSSGARLRGHRPGLFPG 294
           WS+  +SG RL GHRP L PG
Sbjct: 35  WSSQAASGDRLPGHRPPLLPG 55


>AK125299-1|BAC86118.1|  252|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43309 fis, clone NT2RI2004618, highly  similar
           to Cytosolic acyl coenzyme A thioester hydrolase (EC
           3.1.2.2). ).
          Length = 252

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +2

Query: 461 VYFKIENTERKQNLALKSELTEMATTWLTGSLTSMVLGP 577
           VYF+ E  E  Q      +L  M T W  G +   VL P
Sbjct: 102 VYFRQEQEEEGQKRYKTQKLERMETNWRNGDIVQPVLNP 140


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,759,680
Number of Sequences: 237096
Number of extensions: 1980820
Number of successful extensions: 3800
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3797
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)