Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0807
         (736 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr...    30   2.0  
U41027-5|AAC48195.1|  314|Caenorhabditis elegans Hypothetical pr...    29   2.6  
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch...    29   3.4  
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch...    29   3.4  
Z83129-9|CAB63325.2|  100|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical
           protein T01H10.8 protein.
          Length = 2692

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = +3

Query: 147 SKLIYTDNKGXLITNVVNNLIRNNKMNCMEYAYQLWCKAPRTSSGIVSRLSSHLS*LKTM 326
           SKL   D+K  +  ++   L+R      + +  Q WCK P   +G+ +R   H   ++ +
Sbjct: 198 SKLALEDDK--IDWSIFKPLLRIQSSRIISFMIQFWCKYPTNVTGLHNRKFYHEMIIQFL 255

Query: 327 LS 332
           LS
Sbjct: 256 LS 257


>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical
           protein T01H10.8 protein.
          Length = 2692

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = +3

Query: 147 SKLIYTDNKGXLITNVVNNLIRNNKMNCMEYAYQLWCKAPRTSSGIVSRLSSHLS*LKTM 326
           SKL   D+K  +  ++   L+R      + +  Q WCK P   +G+ +R   H   ++ +
Sbjct: 198 SKLALEDDK--IDWSIFKPLLRIQSSRIISFMIQFWCKYPTNVTGLHNRKFYHEMIIQFL 255

Query: 327 LS 332
           LS
Sbjct: 256 LS 257


>U41027-5|AAC48195.1|  314|Caenorhabditis elegans Hypothetical
           protein R08E3.2 protein.
          Length = 314

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +2

Query: 452 NNKVYFKIENTERKQNLALKSELTEMATTWLTGSLTSMVLGPSGTWFPLN 601
           +N+ Y    N+E+  +L L S  T+MA TW TG++ ++     G W   N
Sbjct: 144 SNQAYSS-SNSEKSISL-LASFNTKMAETWQTGNIGNLFCEKEGYWRSFN 191


>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
            protein 1 protein.
          Length = 4568

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
 Frame = +3

Query: 3    PKMKSAVVVLCLFAASLYADEGT-AFNEILAEHLY--NDVIIADYDSAVERSKLIYTDN- 170
            P +K+ VV LC+ A +LY    T    E + E LY  + V  A    + +R +++  +  
Sbjct: 922  PTVKNVVVDLCMTAQTLYISPSTRETREKILEQLYEWHSVCTAQMRISGKRFQMVMNEEI 981

Query: 171  KGXLITNVVNNLIRNNKMNCMEYAYQLWCKAPRTSSGIVSRLSSHLS 311
            +     N++N  +      C+E AY   C      +GI+S L  +LS
Sbjct: 982  EPETYHNILN--VMPEGQACLEKAYD--C-----VNGIMSDLEEYLS 1019


>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
            protein.
          Length = 4568

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
 Frame = +3

Query: 3    PKMKSAVVVLCLFAASLYADEGT-AFNEILAEHLY--NDVIIADYDSAVERSKLIYTDN- 170
            P +K+ VV LC+ A +LY    T    E + E LY  + V  A    + +R +++  +  
Sbjct: 922  PTVKNVVVDLCMTAQTLYISPSTRETREKILEQLYEWHSVCTAQMRISGKRFQMVMNEEI 981

Query: 171  KGXLITNVVNNLIRNNKMNCMEYAYQLWCKAPRTSSGIVSRLSSHLS 311
            +     N++N  +      C+E AY   C      +GI+S L  +LS
Sbjct: 982  EPETYHNILN--VMPEGQACLEKAYD--C-----VNGIMSDLEEYLS 1019


>Z83129-9|CAB63325.2|  100|Caenorhabditis elegans Hypothetical
           protein W06G6.9 protein.
          Length = 100

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -2

Query: 264 EPCTRAGRRTPCSSSCCFVSDCLRHL**AXPCYRCRLVCF 145
           E  T +G++ P +  CC  +DC R       C    L CF
Sbjct: 55  EQPTGSGQQNPANGGCCCDNDCCRCFNEVCRCVGSILFCF 94


>Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical
           protein M02G9.1 protein.
          Length = 909

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 3/81 (3%)
 Frame = -2

Query: 321 FSAKISVNSTGKQSRTMSSEPCTRAGRRTPCSSSC--CFVSDCLRHL**AXPC-YRCRLV 151
           F A+IS+ +   Q   +    C RA   + CS++C    +  C +       C   C   
Sbjct: 45  FFAQISLPACSCQQAPICQPQCPRAEINSDCSATCVRACIPSCSKSTGNTFACSTTCEST 104

Query: 150 CFFQQQSRNQQL*RHCKDAPP 88
           C     S  QQ   H + +PP
Sbjct: 105 CDKTCASAAQQAMSHIQVSPP 125


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,413,691
Number of Sequences: 27780
Number of extensions: 304084
Number of successful extensions: 908
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)