BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0807 (736 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr... 30 2.0 Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr... 30 2.0 U41027-5|AAC48195.1| 314|Caenorhabditis elegans Hypothetical pr... 29 2.6 U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 29 3.4 L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 29 3.4 Z83129-9|CAB63325.2| 100|Caenorhabditis elegans Hypothetical pr... 28 6.0 Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 28 7.9 >Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical protein T01H10.8 protein. Length = 2692 Score = 29.9 bits (64), Expect = 2.0 Identities = 17/62 (27%), Positives = 30/62 (48%) Frame = +3 Query: 147 SKLIYTDNKGXLITNVVNNLIRNNKMNCMEYAYQLWCKAPRTSSGIVSRLSSHLS*LKTM 326 SKL D+K + ++ L+R + + Q WCK P +G+ +R H ++ + Sbjct: 198 SKLALEDDK--IDWSIFKPLLRIQSSRIISFMIQFWCKYPTNVTGLHNRKFYHEMIIQFL 255 Query: 327 LS 332 LS Sbjct: 256 LS 257 >Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical protein T01H10.8 protein. Length = 2692 Score = 29.9 bits (64), Expect = 2.0 Identities = 17/62 (27%), Positives = 30/62 (48%) Frame = +3 Query: 147 SKLIYTDNKGXLITNVVNNLIRNNKMNCMEYAYQLWCKAPRTSSGIVSRLSSHLS*LKTM 326 SKL D+K + ++ L+R + + Q WCK P +G+ +R H ++ + Sbjct: 198 SKLALEDDK--IDWSIFKPLLRIQSSRIISFMIQFWCKYPTNVTGLHNRKFYHEMIIQFL 255 Query: 327 LS 332 LS Sbjct: 256 LS 257 >U41027-5|AAC48195.1| 314|Caenorhabditis elegans Hypothetical protein R08E3.2 protein. Length = 314 Score = 29.5 bits (63), Expect = 2.6 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +2 Query: 452 NNKVYFKIENTERKQNLALKSELTEMATTWLTGSLTSMVLGPSGTWFPLN 601 +N+ Y N+E+ +L L S T+MA TW TG++ ++ G W N Sbjct: 144 SNQAYSS-SNSEKSISL-LASFNTKMAETWQTGNIGNLFCEKEGYWRSFN 191 >U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain protein 1 protein. Length = 4568 Score = 29.1 bits (62), Expect = 3.4 Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 4/107 (3%) Frame = +3 Query: 3 PKMKSAVVVLCLFAASLYADEGT-AFNEILAEHLY--NDVIIADYDSAVERSKLIYTDN- 170 P +K+ VV LC+ A +LY T E + E LY + V A + +R +++ + Sbjct: 922 PTVKNVVVDLCMTAQTLYISPSTRETREKILEQLYEWHSVCTAQMRISGKRFQMVMNEEI 981 Query: 171 KGXLITNVVNNLIRNNKMNCMEYAYQLWCKAPRTSSGIVSRLSSHLS 311 + N++N + C+E AY C +GI+S L +LS Sbjct: 982 EPETYHNILN--VMPEGQACLEKAYD--C-----VNGIMSDLEEYLS 1019 >L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain protein. Length = 4568 Score = 29.1 bits (62), Expect = 3.4 Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 4/107 (3%) Frame = +3 Query: 3 PKMKSAVVVLCLFAASLYADEGT-AFNEILAEHLY--NDVIIADYDSAVERSKLIYTDN- 170 P +K+ VV LC+ A +LY T E + E LY + V A + +R +++ + Sbjct: 922 PTVKNVVVDLCMTAQTLYISPSTRETREKILEQLYEWHSVCTAQMRISGKRFQMVMNEEI 981 Query: 171 KGXLITNVVNNLIRNNKMNCMEYAYQLWCKAPRTSSGIVSRLSSHLS 311 + N++N + C+E AY C +GI+S L +LS Sbjct: 982 EPETYHNILN--VMPEGQACLEKAYD--C-----VNGIMSDLEEYLS 1019 >Z83129-9|CAB63325.2| 100|Caenorhabditis elegans Hypothetical protein W06G6.9 protein. Length = 100 Score = 28.3 bits (60), Expect = 6.0 Identities = 13/40 (32%), Positives = 18/40 (45%) Frame = -2 Query: 264 EPCTRAGRRTPCSSSCCFVSDCLRHL**AXPCYRCRLVCF 145 E T +G++ P + CC +DC R C L CF Sbjct: 55 EQPTGSGQQNPANGGCCCDNDCCRCFNEVCRCVGSILFCF 94 >Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical protein M02G9.1 protein. Length = 909 Score = 27.9 bits (59), Expect = 7.9 Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 3/81 (3%) Frame = -2 Query: 321 FSAKISVNSTGKQSRTMSSEPCTRAGRRTPCSSSC--CFVSDCLRHL**AXPC-YRCRLV 151 F A+IS+ + Q + C RA + CS++C + C + C C Sbjct: 45 FFAQISLPACSCQQAPICQPQCPRAEINSDCSATCVRACIPSCSKSTGNTFACSTTCEST 104 Query: 150 CFFQQQSRNQQL*RHCKDAPP 88 C S QQ H + +PP Sbjct: 105 CDKTCASAAQQAMSHIQVSPP 125 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,413,691 Number of Sequences: 27780 Number of extensions: 304084 Number of successful extensions: 908 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 765 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 906 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1724918872 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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