Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0806
(695 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0177 + 14938920-14940314 129 2e-30
03_06_0024 + 31103185-31104579 128 4e-30
12_02_0176 + 14933044-14934438 126 2e-29
03_05_0258 - 22442527-22443927 123 2e-28
03_04_0132 + 17580131-17581054,17581488-17582036 122 4e-28
04_04_0913 + 29363908-29363942,29364355-29364607,29364666-293649... 64 8e-11
03_01_0331 - 2609012-2609365,2609579-2609920,2610009-2610257,261... 63 2e-10
02_01_0384 - 2781362-2782299,2782320-2782428 29 4.7
07_03_1669 + 28499143-28499409,28499915-28500055,28500528-285006... 28 6.2
02_05_1277 - 35408097-35409080 28 6.2
12_01_0233 + 1750772-1752058 28 8.1
>12_02_0177 + 14938920-14940314
Length = 464
Score = 129 bits (312), Expect = 2e-30
Identities = 57/88 (64%), Positives = 75/88 (85%)
Frame = +1
Query: 7 SEERIKQWNSDKLPIYEPGLDDVVRECRGKNLFFSTNIAESIREADLIFISVNTPTKTIG 186
S+ R+ WNSD+LPIYEPGLD+VV+ECRG+NLFFST++ + + EAD+IF+SVNTPTKT G
Sbjct: 19 SKPRVDAWNSDQLPIYEPGLDEVVKECRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRG 78
Query: 187 NGKGRAADLKYIESAARMIADLAPAIRL 270
G G+AADL Y ESAARMIAD++ + ++
Sbjct: 79 LGAGKAADLTYWESAARMIADVSKSDKI 106
Score = 120 bits (289), Expect = 1e-27
Identities = 60/83 (72%), Positives = 68/83 (81%)
Frame = +3
Query: 258 SNKIVVEKSTVPVKAAEIIMKILRANTKPGVEYQILSNPEFLAEGTAIVDLVEAERVLIG 437
S+KIVVEKSTVPVK AE I KIL N+K G+ YQILSNPEFLAEGTAI DL + +RVLIG
Sbjct: 103 SDKIVVEKSTVPVKTAEAIEKILTHNSK-GINYQILSNPEFLAEGTAIEDLFKPDRVLIG 161
Query: 438 GEDTPEGQKAVQELCWVYEHWIP 506
G +TPEG+KAVQ L VY HW+P
Sbjct: 162 GRETPEGKKAVQALKEVYAHWVP 184
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/42 (73%), Positives = 37/42 (88%)
Frame = +2
Query: 503 PGKNILTTNTWSSELSKLAANAFLAQRISSINSLSAVXEATG 628
P I+TTN WS+ELSKLAANAFLAQRISS+N++SA+ EATG
Sbjct: 184 PEDRIITTNLWSAELSKLAANAFLAQRISSVNAISALCEATG 225
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +1
Query: 631 DVSXVARAVGRDSRIGPKFL 690
+VS VA AVG+D+RIGPKFL
Sbjct: 227 NVSEVAYAVGKDTRIGPKFL 246
>03_06_0024 + 31103185-31104579
Length = 464
Score = 128 bits (309), Expect = 4e-30
Identities = 57/88 (64%), Positives = 75/88 (85%)
Frame = +1
Query: 7 SEERIKQWNSDKLPIYEPGLDDVVRECRGKNLFFSTNIAESIREADLIFISVNTPTKTIG 186
S+ RI WNS++LPIYEPGLD+VV+ECRG+NLFFST++ + + EAD+IF+SVNTPTKT G
Sbjct: 19 SKPRIDAWNSEQLPIYEPGLDEVVKECRGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRG 78
Query: 187 NGKGRAADLKYIESAARMIADLAPAIRL 270
G G+AADL Y ESAARMIAD++ + ++
Sbjct: 79 LGAGKAADLTYWESAARMIADVSKSDKI 106
Score = 116 bits (280), Expect = 1e-26
Identities = 59/83 (71%), Positives = 67/83 (80%)
Frame = +3
Query: 258 SNKIVVEKSTVPVKAAEIIMKILRANTKPGVEYQILSNPEFLAEGTAIVDLVEAERVLIG 437
S+KIVVEKSTVPVK AE I KIL N+K G+ YQILSNPEFLAEGTAI DL + +RVLIG
Sbjct: 103 SDKIVVEKSTVPVKTAEAIEKILTHNSK-GINYQILSNPEFLAEGTAIDDLFKPDRVLIG 161
Query: 438 GEDTPEGQKAVQELCWVYEHWIP 506
G +T EG+KAVQ L VY HW+P
Sbjct: 162 GRETAEGRKAVQALKSVYAHWVP 184
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/42 (73%), Positives = 37/42 (88%)
Frame = +2
Query: 503 PGKNILTTNTWSSELSKLAANAFLAQRISSINSLSAVXEATG 628
P I+TTN WS+ELSKLAANAFLAQRISS+N++SA+ EATG
Sbjct: 184 PEDRIITTNLWSAELSKLAANAFLAQRISSVNAISALCEATG 225
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +1
Query: 631 DVSXVARAVGRDSRIGPKFL 690
+V+ VA AVG+DSRIGPKFL
Sbjct: 227 NVTEVAYAVGKDSRIGPKFL 246
>12_02_0176 + 14933044-14934438
Length = 464
Score = 126 bits (304), Expect = 2e-29
Identities = 56/88 (63%), Positives = 75/88 (85%)
Frame = +1
Query: 7 SEERIKQWNSDKLPIYEPGLDDVVRECRGKNLFFSTNIAESIREADLIFISVNTPTKTIG 186
S+ RI WNS++LPIYEPGLD+VV+ECRG+NLFFST++ + + EA++IF+SVNTPTKT G
Sbjct: 19 SKPRIDAWNSEQLPIYEPGLDEVVKECRGRNLFFSTDVEKHVAEANIIFVSVNTPTKTRG 78
Query: 187 NGKGRAADLKYIESAARMIADLAPAIRL 270
G G+AADL Y ESAARMIAD++ + ++
Sbjct: 79 LGAGKAADLTYWESAARMIADVSKSDKI 106
Score = 120 bits (289), Expect = 1e-27
Identities = 60/83 (72%), Positives = 68/83 (81%)
Frame = +3
Query: 258 SNKIVVEKSTVPVKAAEIIMKILRANTKPGVEYQILSNPEFLAEGTAIVDLVEAERVLIG 437
S+KIVVEKSTVPVK AE I KIL N+K G+ YQILSNPEFLAEGTAI DL + +RVLIG
Sbjct: 103 SDKIVVEKSTVPVKTAEAIEKILTHNSK-GINYQILSNPEFLAEGTAIEDLFKPDRVLIG 161
Query: 438 GEDTPEGQKAVQELCWVYEHWIP 506
G +TPEG+KAVQ L VY HW+P
Sbjct: 162 GRETPEGKKAVQALKEVYAHWVP 184
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/42 (73%), Positives = 37/42 (88%)
Frame = +2
Query: 503 PGKNILTTNTWSSELSKLAANAFLAQRISSINSLSAVXEATG 628
P I+TTN WS+ELSKLAANAFLAQRISS+N++SA+ EATG
Sbjct: 184 PEDRIITTNLWSAELSKLAANAFLAQRISSVNAISALCEATG 225
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +1
Query: 631 DVSXVARAVGRDSRIGPKFL 690
+V+ VA +VG+DSRIGPKFL
Sbjct: 227 NVAEVAYSVGKDSRIGPKFL 246
>03_05_0258 - 22442527-22443927
Length = 466
Score = 123 bits (296), Expect = 2e-28
Identities = 54/83 (65%), Positives = 70/83 (84%)
Frame = +1
Query: 7 SEERIKQWNSDKLPIYEPGLDDVVRECRGKNLFFSTNIAESIREADLIFISVNTPTKTIG 186
S RI+ WNS++LPIYEPGLDDVVR+CRG+NLFFST++ + +A ++F+SVNTPTKT G
Sbjct: 19 SAPRIEGWNSERLPIYEPGLDDVVRQCRGRNLFFSTDVERHVADAGIVFVSVNTPTKTRG 78
Query: 187 NGKGRAADLKYIESAARMIADLA 255
G G+AADL Y ESAAR+IAD++
Sbjct: 79 LGAGKAADLTYWESAARIIADVS 101
Score = 110 bits (265), Expect = 9e-25
Identities = 56/84 (66%), Positives = 64/84 (76%), Gaps = 1/84 (1%)
Frame = +3
Query: 258 SNKIVVEKSTVPVKAAEIIMKILRANTKPG-VEYQILSNPEFLAEGTAIVDLVEAERVLI 434
S+KIVVEKSTVPVK AE I KIL N+K G + YQILSNPEFLAEGTAI DL +RVLI
Sbjct: 103 SDKIVVEKSTVPVKTAEAIEKILAHNSKGGNIRYQILSNPEFLAEGTAIQDLFSPDRVLI 162
Query: 435 GGEDTPEGQKAVQELCWVYEHWIP 506
GG +TPEG+ AV L +Y W+P
Sbjct: 163 GGRETPEGRAAVAALKSIYARWVP 186
Score = 67.7 bits (158), Expect = 8e-12
Identities = 31/42 (73%), Positives = 37/42 (88%)
Frame = +2
Query: 503 PGKNILTTNTWSSELSKLAANAFLAQRISSINSLSAVXEATG 628
P I+TTN WS+ELSKLAANAFLAQRISS+N++SA+ EATG
Sbjct: 186 PDDRIITTNLWSAELSKLAANAFLAQRISSVNAISALCEATG 227
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +1
Query: 631 DVSXVARAVGRDSRIGPKFL 690
DV+ VA ++G+DSRIGP+FL
Sbjct: 229 DVTEVANSIGKDSRIGPRFL 248
>03_04_0132 + 17580131-17581054,17581488-17582036
Length = 490
Score = 122 bits (293), Expect = 4e-28
Identities = 56/83 (67%), Positives = 66/83 (79%)
Frame = +1
Query: 7 SEERIKQWNSDKLPIYEPGLDDVVRECRGKNLFFSTNIAESIREADLIFISVNTPTKTIG 186
S RI WNSD LPIYEPGLDDVVR CRG+NLFFS+++ + EAD++F+SVNTPTK G
Sbjct: 19 SAARIDAWNSDALPIYEPGLDDVVRRCRGRNLFFSSDVERHVGEADIVFVSVNTPTKARG 78
Query: 187 NGKGRAADLKYIESAARMIADLA 255
G G+AADL Y ESAARMIA +A
Sbjct: 79 LGAGKAADLTYWESAARMIAAVA 101
Score = 109 bits (261), Expect = 3e-24
Identities = 55/84 (65%), Positives = 64/84 (76%)
Frame = +3
Query: 255 TSNKIVVEKSTVPVKAAEIIMKILRANTKPGVEYQILSNPEFLAEGTAIVDLVEAERVLI 434
TS+K+VVEKSTVPVK AE I KIL N + GV +QILSNPEFLAEGTAI DL+ +RVLI
Sbjct: 102 TSDKVVVEKSTVPVKTAEAIEKILDHNGRDGVGFQILSNPEFLAEGTAIRDLLAPDRVLI 161
Query: 435 GGEDTPEGQKAVQELCWVYEHWIP 506
GG +T G+ AVQ L VY W+P
Sbjct: 162 GGRETAAGRAAVQALKDVYTRWVP 185
Score = 68.9 bits (161), Expect = 4e-12
Identities = 32/42 (76%), Positives = 38/42 (90%)
Frame = +2
Query: 503 PGKNILTTNTWSSELSKLAANAFLAQRISSINSLSAVXEATG 628
P + ILTTN WS+ELSKLAANAFLAQRISS+N++SA+ EATG
Sbjct: 185 PEERILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATG 226
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +1
Query: 631 DVSXVARAVGRDSRIGPKFL 690
DV+ VA AVG+DSRIG KFL
Sbjct: 228 DVAEVAYAVGKDSRIGAKFL 247
>04_04_0913 +
29363908-29363942,29364355-29364607,29364666-29364983,
29365197-29365550
Length = 319
Score = 64.5 bits (150), Expect = 8e-11
Identities = 29/42 (69%), Positives = 36/42 (85%)
Frame = +2
Query: 503 PGKNILTTNTWSSELSKLAANAFLAQRISSINSLSAVXEATG 628
P I+TTN WS+ELSKLA NAFLAQR+SS+N++SA+ EATG
Sbjct: 107 PVDRIVTTNLWSAELSKLAVNAFLAQRVSSVNAISALCEATG 148
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = +3
Query: 291 PVKAAEIIMKILRANTKPGVEYQILSNPEFLAE 389
PV+ AE I KIL N VE+Q+LSNPEFLAE
Sbjct: 65 PVRTAEAIEKILAHNAHV-VEFQVLSNPEFLAE 96
>03_01_0331 -
2609012-2609365,2609579-2609920,2610009-2610257,
2610748-2610750
Length = 315
Score = 63.3 bits (147), Expect = 2e-10
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = +2
Query: 503 PGKNILTTNTWSSELSKLAANAFLAQRISSINSLSAVXEATG 628
P I+TTN WS+ELSKLA NAFL QR+SS+N++SA+ EATG
Sbjct: 95 PVDRIITTNLWSAELSKLAVNAFLVQRVSSVNAISALCEATG 136
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/41 (58%), Positives = 28/41 (68%)
Frame = +3
Query: 249 SGTSNKIVVEKSTVPVKAAEIIMKILRANTKPGVEYQILSN 371
S S+K+VVEKSTVPVK AE I KIL N VE+Q L +
Sbjct: 49 SSRSSKVVVEKSTVPVKTAEAIEKILAHNAHV-VEFQALKD 88
Score = 34.3 bits (75), Expect = 0.094
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1
Query: 190 GKGRAADLKYIESAARMIAD 249
G G+AADL Y ESAARMIAD
Sbjct: 29 GAGKAADLAYWESAARMIAD 48
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -2
Query: 457 PSGVSSPPIRTLSASTRSTIAVPSAKNS 374
PS SP IRT SAS S I +PS + S
Sbjct: 303 PSAAPSPVIRTPSASWSSAICLPSPQPS 330
>07_03_1669 +
28499143-28499409,28499915-28500055,28500528-28500659,
28501185-28501373,28501503-28501580,28502267-28502386,
28502701-28502818,28503012-28503280,28503428-28503622,
28503737-28503879,28504096-28504180,28504270-28504479,
28504559-28504711,28504862-28504966,28505044-28505235
Length = 798
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
Frame = -2
Query: 535 PSIGCQDVLAGIQCSYTQHS-----S*TAFWPSGVSSPPIRTLSASTRSTIAVPSAKNSG 371
P + D I+CS ++ + T +W SG P + L ++ + P K
Sbjct: 535 PQVASSDA-TNIECSISRQGDFYVINGTKWWTSGAMDPRCQILVLMGKTDFSAPKHKQQS 593
Query: 370 FDRIWYSTPGLVLARRIFI 314
+ TPG+ + R + +
Sbjct: 594 MILVDVKTPGVQIRRPLLV 612
>02_05_1277 - 35408097-35409080
Length = 327
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 446 VFPADQNSFSLNKINYSGSLC*KLRVRQDLVLNARFGIG 330
V P SLN + +GS+ KLRV + + A FG G
Sbjct: 189 VVPDVTTVLSLNNVAAAGSIINKLRVHECSICGAEFGSG 227
>12_01_0233 + 1750772-1752058
Length = 428
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/82 (25%), Positives = 35/82 (42%)
Frame = -1
Query: 338 GIGTKDFHNNFSSFDWNSRFLDDNLIAGARSAIMRAALSMYFKSAARPFPLPIVFVGVLT 159
G+ + H +F S+ D+ GA++ AA+ + S++ P P P V VL
Sbjct: 34 GVTPRQPHQSFRSYLAQMGGTGDD---GAKAPAAAAAMDVVSSSSSSPAPAPSVLKSVLL 90
Query: 158 DINIKSASRMLSAMFVEKNKFL 93
S LS + NK++
Sbjct: 91 SYAYVSVWITLSFSVIVYNKYI 112
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,823,110
Number of Sequences: 37544
Number of extensions: 437018
Number of successful extensions: 1185
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1181
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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