BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0806 (695 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z73974-4|CAA98269.1| 481|Caenorhabditis elegans Hypothetical pr... 118 3e-27 AY147932-1|AAN39842.1| 481|Caenorhabditis elegans UDP-glucose d... 118 3e-27 AF497830-1|AAM18108.1| 533|Caenorhabditis elegans putative Na-H... 28 5.5 AF098995-2|AAC67478.2| 538|Caenorhabditis elegans Na/h exchange... 28 5.5 AF098995-1|AAR30204.1| 634|Caenorhabditis elegans Na/h exchange... 28 5.5 U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfi... 27 9.7 U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfi... 27 9.7 >Z73974-4|CAA98269.1| 481|Caenorhabditis elegans Hypothetical protein F29F11.1 protein. Length = 481 Score = 118 bits (285), Expect = 3e-27 Identities = 54/80 (67%), Positives = 65/80 (81%) Frame = +1 Query: 16 RIKQWNSDKLPIYEPGLDDVVRECRGKNLFFSTNIAESIREADLIFISVNTPTKTIGNGK 195 +I +WNSDKLPIYEPGLD++V RG+NLFFS++I ++I EADLIFISVNTPTK G GK Sbjct: 46 KIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADLIFISVNTPTKMYGRGK 105 Query: 196 GRAADLKYIESAARMIADLA 255 G A DLKY+ES +R IA A Sbjct: 106 GMAPDLKYVESVSRTIAQYA 125 Score = 104 bits (249), Expect = 7e-23 Identities = 53/83 (63%), Positives = 64/83 (77%), Gaps = 2/83 (2%) Frame = +3 Query: 264 KIVVEKSTVPVKAAEIIMKILRANTK--PGVEYQILSNPEFLAEGTAIVDLVEAERVLIG 437 KIVVEKSTVPVKAAE I ILR K +++Q+LSNPEFLAEGTA+ DL +RVLIG Sbjct: 129 KIVVEKSTVPVKAAESIGCILREAQKNNENLKFQVLSNPEFLAEGTAMKDLANPDRVLIG 188 Query: 438 GEDTPEGQKAVQELCWVYEHWIP 506 GE +PEG +AV EL +YE+W+P Sbjct: 189 GESSPEGLQAVAELVRIYENWVP 211 Score = 72.5 bits (170), Expect = 3e-13 Identities = 35/42 (83%), Positives = 37/42 (88%) Frame = +2 Query: 503 PGKNILTTNTWSSELSKLAANAFLAQRISSINSLSAVXEATG 628 P I+TTNTWSSELSKL ANAFLAQRISSINS+SAV EATG Sbjct: 211 PRNRIITTNTWSSELSKLVANAFLAQRISSINSISAVCEATG 252 Score = 30.7 bits (66), Expect = 1.0 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = +1 Query: 631 DVSXVARAVGRDSRIGPKFLE 693 ++S VA AVG D+RIG KFL+ Sbjct: 254 EISEVAHAVGYDTRIGSKFLQ 274 >AY147932-1|AAN39842.1| 481|Caenorhabditis elegans UDP-glucose dehydrogenase protein. Length = 481 Score = 118 bits (285), Expect = 3e-27 Identities = 54/80 (67%), Positives = 65/80 (81%) Frame = +1 Query: 16 RIKQWNSDKLPIYEPGLDDVVRECRGKNLFFSTNIAESIREADLIFISVNTPTKTIGNGK 195 +I +WNSDKLPIYEPGLD++V RG+NLFFS++I ++I EADLIFISVNTPTK G GK Sbjct: 46 KIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADLIFISVNTPTKMYGRGK 105 Query: 196 GRAADLKYIESAARMIADLA 255 G A DLKY+ES +R IA A Sbjct: 106 GMAPDLKYVESVSRTIAQYA 125 Score = 104 bits (249), Expect = 7e-23 Identities = 53/83 (63%), Positives = 64/83 (77%), Gaps = 2/83 (2%) Frame = +3 Query: 264 KIVVEKSTVPVKAAEIIMKILRANTK--PGVEYQILSNPEFLAEGTAIVDLVEAERVLIG 437 KIVVEKSTVPVKAAE I ILR K +++Q+LSNPEFLAEGTA+ DL +RVLIG Sbjct: 129 KIVVEKSTVPVKAAESIGCILREAQKNNENLKFQVLSNPEFLAEGTAMKDLANPDRVLIG 188 Query: 438 GEDTPEGQKAVQELCWVYEHWIP 506 GE +PEG +AV EL +YE+W+P Sbjct: 189 GESSPEGLQAVAELVRIYENWVP 211 Score = 72.5 bits (170), Expect = 3e-13 Identities = 35/42 (83%), Positives = 37/42 (88%) Frame = +2 Query: 503 PGKNILTTNTWSSELSKLAANAFLAQRISSINSLSAVXEATG 628 P I+TTNTWSSELSKL ANAFLAQRISSINS+SAV EATG Sbjct: 211 PRNRIITTNTWSSELSKLVANAFLAQRISSINSISAVCEATG 252 Score = 30.7 bits (66), Expect = 1.0 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = +1 Query: 631 DVSXVARAVGRDSRIGPKFLE 693 ++S VA AVG D+RIG KFL+ Sbjct: 254 EISEVAHAVGYDTRIGSKFLQ 274 >AF497830-1|AAM18108.1| 533|Caenorhabditis elegans putative Na-H exchanger isoform 6 protein. Length = 533 Score = 28.3 bits (60), Expect = 5.5 Identities = 16/58 (27%), Positives = 28/58 (48%) Frame = -3 Query: 633 ITPVASXTADNELMLDIRWARKAFAASLDSSELQVLVVRMFLPGSSVRTPSIVPEQLS 460 + PVA EL ++ F SL + + V++ RMFL S + +++PE + Sbjct: 186 VDPVAVIVIFEELAVNDVLFIAVFGESLFNDGVSVVLYRMFLTFSEIGAENLIPEDFA 243 >AF098995-2|AAC67478.2| 538|Caenorhabditis elegans Na/h exchanger protein 6, isoform a protein. Length = 538 Score = 28.3 bits (60), Expect = 5.5 Identities = 16/58 (27%), Positives = 28/58 (48%) Frame = -3 Query: 633 ITPVASXTADNELMLDIRWARKAFAASLDSSELQVLVVRMFLPGSSVRTPSIVPEQLS 460 + PVA EL ++ F SL + + V++ RMFL S + +++PE + Sbjct: 186 VDPVAVIVIFEELAVNDVLFIAVFGESLFNDGVSVVLYRMFLTFSEIGAENLIPEDFA 243 >AF098995-1|AAR30204.1| 634|Caenorhabditis elegans Na/h exchanger protein 6, isoform b protein. Length = 634 Score = 28.3 bits (60), Expect = 5.5 Identities = 16/58 (27%), Positives = 28/58 (48%) Frame = -3 Query: 633 ITPVASXTADNELMLDIRWARKAFAASLDSSELQVLVVRMFLPGSSVRTPSIVPEQLS 460 + PVA EL ++ F SL + + V++ RMFL S + +++PE + Sbjct: 186 VDPVAVIVIFEELAVNDVLFIAVFGESLFNDGVSVVLYRMFLTFSEIGAENLIPEDFA 243 >U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfide isomerase protein2, isoform b protein. Length = 437 Score = 27.5 bits (58), Expect = 9.7 Identities = 15/57 (26%), Positives = 28/57 (49%) Frame = -1 Query: 323 DFHNNFSSFDWNSRFLDDNLIAGARSAIMRAALSMYFKSAARPFPLPIVFVGVLTDI 153 +F +S + NL+ ++ + A L FK+AA+ F ++FV + TD+ Sbjct: 179 EFTQETASVIFGGEIKSHNLLFVSKESSEFAKLEQEFKNAAKQFKGKVLFVYINTDV 235 >U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfide isomerase protein2, isoform a protein. Length = 493 Score = 27.5 bits (58), Expect = 9.7 Identities = 15/57 (26%), Positives = 28/57 (49%) Frame = -1 Query: 323 DFHNNFSSFDWNSRFLDDNLIAGARSAIMRAALSMYFKSAARPFPLPIVFVGVLTDI 153 +F +S + NL+ ++ + A L FK+AA+ F ++FV + TD+ Sbjct: 235 EFTQETASVIFGGEIKSHNLLFVSKESSEFAKLEQEFKNAAKQFKGKVLFVYINTDV 291 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,586,861 Number of Sequences: 27780 Number of extensions: 364803 Number of successful extensions: 972 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 938 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 970 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1602927856 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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