Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0806
(695 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73974-4|CAA98269.1| 481|Caenorhabditis elegans Hypothetical pr... 118 3e-27
AY147932-1|AAN39842.1| 481|Caenorhabditis elegans UDP-glucose d... 118 3e-27
AF497830-1|AAM18108.1| 533|Caenorhabditis elegans putative Na-H... 28 5.5
AF098995-2|AAC67478.2| 538|Caenorhabditis elegans Na/h exchange... 28 5.5
AF098995-1|AAR30204.1| 634|Caenorhabditis elegans Na/h exchange... 28 5.5
U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfi... 27 9.7
U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfi... 27 9.7
>Z73974-4|CAA98269.1| 481|Caenorhabditis elegans Hypothetical
protein F29F11.1 protein.
Length = 481
Score = 118 bits (285), Expect = 3e-27
Identities = 54/80 (67%), Positives = 65/80 (81%)
Frame = +1
Query: 16 RIKQWNSDKLPIYEPGLDDVVRECRGKNLFFSTNIAESIREADLIFISVNTPTKTIGNGK 195
+I +WNSDKLPIYEPGLD++V RG+NLFFS++I ++I EADLIFISVNTPTK G GK
Sbjct: 46 KIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADLIFISVNTPTKMYGRGK 105
Query: 196 GRAADLKYIESAARMIADLA 255
G A DLKY+ES +R IA A
Sbjct: 106 GMAPDLKYVESVSRTIAQYA 125
Score = 104 bits (249), Expect = 7e-23
Identities = 53/83 (63%), Positives = 64/83 (77%), Gaps = 2/83 (2%)
Frame = +3
Query: 264 KIVVEKSTVPVKAAEIIMKILRANTK--PGVEYQILSNPEFLAEGTAIVDLVEAERVLIG 437
KIVVEKSTVPVKAAE I ILR K +++Q+LSNPEFLAEGTA+ DL +RVLIG
Sbjct: 129 KIVVEKSTVPVKAAESIGCILREAQKNNENLKFQVLSNPEFLAEGTAMKDLANPDRVLIG 188
Query: 438 GEDTPEGQKAVQELCWVYEHWIP 506
GE +PEG +AV EL +YE+W+P
Sbjct: 189 GESSPEGLQAVAELVRIYENWVP 211
Score = 72.5 bits (170), Expect = 3e-13
Identities = 35/42 (83%), Positives = 37/42 (88%)
Frame = +2
Query: 503 PGKNILTTNTWSSELSKLAANAFLAQRISSINSLSAVXEATG 628
P I+TTNTWSSELSKL ANAFLAQRISSINS+SAV EATG
Sbjct: 211 PRNRIITTNTWSSELSKLVANAFLAQRISSINSISAVCEATG 252
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 631 DVSXVARAVGRDSRIGPKFLE 693
++S VA AVG D+RIG KFL+
Sbjct: 254 EISEVAHAVGYDTRIGSKFLQ 274
>AY147932-1|AAN39842.1| 481|Caenorhabditis elegans UDP-glucose
dehydrogenase protein.
Length = 481
Score = 118 bits (285), Expect = 3e-27
Identities = 54/80 (67%), Positives = 65/80 (81%)
Frame = +1
Query: 16 RIKQWNSDKLPIYEPGLDDVVRECRGKNLFFSTNIAESIREADLIFISVNTPTKTIGNGK 195
+I +WNSDKLPIYEPGLD++V RG+NLFFS++I ++I EADLIFISVNTPTK G GK
Sbjct: 46 KIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADLIFISVNTPTKMYGRGK 105
Query: 196 GRAADLKYIESAARMIADLA 255
G A DLKY+ES +R IA A
Sbjct: 106 GMAPDLKYVESVSRTIAQYA 125
Score = 104 bits (249), Expect = 7e-23
Identities = 53/83 (63%), Positives = 64/83 (77%), Gaps = 2/83 (2%)
Frame = +3
Query: 264 KIVVEKSTVPVKAAEIIMKILRANTK--PGVEYQILSNPEFLAEGTAIVDLVEAERVLIG 437
KIVVEKSTVPVKAAE I ILR K +++Q+LSNPEFLAEGTA+ DL +RVLIG
Sbjct: 129 KIVVEKSTVPVKAAESIGCILREAQKNNENLKFQVLSNPEFLAEGTAMKDLANPDRVLIG 188
Query: 438 GEDTPEGQKAVQELCWVYEHWIP 506
GE +PEG +AV EL +YE+W+P
Sbjct: 189 GESSPEGLQAVAELVRIYENWVP 211
Score = 72.5 bits (170), Expect = 3e-13
Identities = 35/42 (83%), Positives = 37/42 (88%)
Frame = +2
Query: 503 PGKNILTTNTWSSELSKLAANAFLAQRISSINSLSAVXEATG 628
P I+TTNTWSSELSKL ANAFLAQRISSINS+SAV EATG
Sbjct: 211 PRNRIITTNTWSSELSKLVANAFLAQRISSINSISAVCEATG 252
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 631 DVSXVARAVGRDSRIGPKFLE 693
++S VA AVG D+RIG KFL+
Sbjct: 254 EISEVAHAVGYDTRIGSKFLQ 274
>AF497830-1|AAM18108.1| 533|Caenorhabditis elegans putative Na-H
exchanger isoform 6 protein.
Length = 533
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -3
Query: 633 ITPVASXTADNELMLDIRWARKAFAASLDSSELQVLVVRMFLPGSSVRTPSIVPEQLS 460
+ PVA EL ++ F SL + + V++ RMFL S + +++PE +
Sbjct: 186 VDPVAVIVIFEELAVNDVLFIAVFGESLFNDGVSVVLYRMFLTFSEIGAENLIPEDFA 243
>AF098995-2|AAC67478.2| 538|Caenorhabditis elegans Na/h exchanger
protein 6, isoform a protein.
Length = 538
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -3
Query: 633 ITPVASXTADNELMLDIRWARKAFAASLDSSELQVLVVRMFLPGSSVRTPSIVPEQLS 460
+ PVA EL ++ F SL + + V++ RMFL S + +++PE +
Sbjct: 186 VDPVAVIVIFEELAVNDVLFIAVFGESLFNDGVSVVLYRMFLTFSEIGAENLIPEDFA 243
>AF098995-1|AAR30204.1| 634|Caenorhabditis elegans Na/h exchanger
protein 6, isoform b protein.
Length = 634
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -3
Query: 633 ITPVASXTADNELMLDIRWARKAFAASLDSSELQVLVVRMFLPGSSVRTPSIVPEQLS 460
+ PVA EL ++ F SL + + V++ RMFL S + +++PE +
Sbjct: 186 VDPVAVIVIFEELAVNDVLFIAVFGESLFNDGVSVVLYRMFLTFSEIGAENLIPEDFA 243
>U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform b protein.
Length = 437
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 323 DFHNNFSSFDWNSRFLDDNLIAGARSAIMRAALSMYFKSAARPFPLPIVFVGVLTDI 153
+F +S + NL+ ++ + A L FK+AA+ F ++FV + TD+
Sbjct: 179 EFTQETASVIFGGEIKSHNLLFVSKESSEFAKLEQEFKNAAKQFKGKVLFVYINTDV 235
>U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform a protein.
Length = 493
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 323 DFHNNFSSFDWNSRFLDDNLIAGARSAIMRAALSMYFKSAARPFPLPIVFVGVLTDI 153
+F +S + NL+ ++ + A L FK+AA+ F ++FV + TD+
Sbjct: 235 EFTQETASVIFGGEIKSHNLLFVSKESSEFAKLEQEFKNAAKQFKGKVLFVYINTDV 291
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,586,861
Number of Sequences: 27780
Number of extensions: 364803
Number of successful extensions: 972
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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