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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0806
         (695 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73974-4|CAA98269.1|  481|Caenorhabditis elegans Hypothetical pr...   118   3e-27
AY147932-1|AAN39842.1|  481|Caenorhabditis elegans UDP-glucose d...   118   3e-27
AF497830-1|AAM18108.1|  533|Caenorhabditis elegans putative Na-H...    28   5.5  
AF098995-2|AAC67478.2|  538|Caenorhabditis elegans Na/h exchange...    28   5.5  
AF098995-1|AAR30204.1|  634|Caenorhabditis elegans Na/h exchange...    28   5.5  
U41542-8|AAN39682.1|  437|Caenorhabditis elegans Protein disulfi...    27   9.7  
U41542-6|AAK39152.1|  493|Caenorhabditis elegans Protein disulfi...    27   9.7  

>Z73974-4|CAA98269.1|  481|Caenorhabditis elegans Hypothetical
           protein F29F11.1 protein.
          Length = 481

 Score =  118 bits (285), Expect = 3e-27
 Identities = 54/80 (67%), Positives = 65/80 (81%)
 Frame = +1

Query: 16  RIKQWNSDKLPIYEPGLDDVVRECRGKNLFFSTNIAESIREADLIFISVNTPTKTIGNGK 195
           +I +WNSDKLPIYEPGLD++V   RG+NLFFS++I ++I EADLIFISVNTPTK  G GK
Sbjct: 46  KIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADLIFISVNTPTKMYGRGK 105

Query: 196 GRAADLKYIESAARMIADLA 255
           G A DLKY+ES +R IA  A
Sbjct: 106 GMAPDLKYVESVSRTIAQYA 125



 Score =  104 bits (249), Expect = 7e-23
 Identities = 53/83 (63%), Positives = 64/83 (77%), Gaps = 2/83 (2%)
 Frame = +3

Query: 264 KIVVEKSTVPVKAAEIIMKILRANTK--PGVEYQILSNPEFLAEGTAIVDLVEAERVLIG 437
           KIVVEKSTVPVKAAE I  ILR   K    +++Q+LSNPEFLAEGTA+ DL   +RVLIG
Sbjct: 129 KIVVEKSTVPVKAAESIGCILREAQKNNENLKFQVLSNPEFLAEGTAMKDLANPDRVLIG 188

Query: 438 GEDTPEGQKAVQELCWVYEHWIP 506
           GE +PEG +AV EL  +YE+W+P
Sbjct: 189 GESSPEGLQAVAELVRIYENWVP 211



 Score = 72.5 bits (170), Expect = 3e-13
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = +2

Query: 503 PGKNILTTNTWSSELSKLAANAFLAQRISSINSLSAVXEATG 628
           P   I+TTNTWSSELSKL ANAFLAQRISSINS+SAV EATG
Sbjct: 211 PRNRIITTNTWSSELSKLVANAFLAQRISSINSISAVCEATG 252



 Score = 30.7 bits (66), Expect = 1.0
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +1

Query: 631 DVSXVARAVGRDSRIGPKFLE 693
           ++S VA AVG D+RIG KFL+
Sbjct: 254 EISEVAHAVGYDTRIGSKFLQ 274


>AY147932-1|AAN39842.1|  481|Caenorhabditis elegans UDP-glucose
           dehydrogenase protein.
          Length = 481

 Score =  118 bits (285), Expect = 3e-27
 Identities = 54/80 (67%), Positives = 65/80 (81%)
 Frame = +1

Query: 16  RIKQWNSDKLPIYEPGLDDVVRECRGKNLFFSTNIAESIREADLIFISVNTPTKTIGNGK 195
           +I +WNSDKLPIYEPGLD++V   RG+NLFFS++I ++I EADLIFISVNTPTK  G GK
Sbjct: 46  KIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADLIFISVNTPTKMYGRGK 105

Query: 196 GRAADLKYIESAARMIADLA 255
           G A DLKY+ES +R IA  A
Sbjct: 106 GMAPDLKYVESVSRTIAQYA 125



 Score =  104 bits (249), Expect = 7e-23
 Identities = 53/83 (63%), Positives = 64/83 (77%), Gaps = 2/83 (2%)
 Frame = +3

Query: 264 KIVVEKSTVPVKAAEIIMKILRANTK--PGVEYQILSNPEFLAEGTAIVDLVEAERVLIG 437
           KIVVEKSTVPVKAAE I  ILR   K    +++Q+LSNPEFLAEGTA+ DL   +RVLIG
Sbjct: 129 KIVVEKSTVPVKAAESIGCILREAQKNNENLKFQVLSNPEFLAEGTAMKDLANPDRVLIG 188

Query: 438 GEDTPEGQKAVQELCWVYEHWIP 506
           GE +PEG +AV EL  +YE+W+P
Sbjct: 189 GESSPEGLQAVAELVRIYENWVP 211



 Score = 72.5 bits (170), Expect = 3e-13
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = +2

Query: 503 PGKNILTTNTWSSELSKLAANAFLAQRISSINSLSAVXEATG 628
           P   I+TTNTWSSELSKL ANAFLAQRISSINS+SAV EATG
Sbjct: 211 PRNRIITTNTWSSELSKLVANAFLAQRISSINSISAVCEATG 252



 Score = 30.7 bits (66), Expect = 1.0
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +1

Query: 631 DVSXVARAVGRDSRIGPKFLE 693
           ++S VA AVG D+RIG KFL+
Sbjct: 254 EISEVAHAVGYDTRIGSKFLQ 274


>AF497830-1|AAM18108.1|  533|Caenorhabditis elegans putative Na-H
           exchanger isoform 6 protein.
          Length = 533

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = -3

Query: 633 ITPVASXTADNELMLDIRWARKAFAASLDSSELQVLVVRMFLPGSSVRTPSIVPEQLS 460
           + PVA      EL ++       F  SL +  + V++ RMFL  S +   +++PE  +
Sbjct: 186 VDPVAVIVIFEELAVNDVLFIAVFGESLFNDGVSVVLYRMFLTFSEIGAENLIPEDFA 243


>AF098995-2|AAC67478.2|  538|Caenorhabditis elegans Na/h exchanger
           protein 6, isoform a protein.
          Length = 538

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = -3

Query: 633 ITPVASXTADNELMLDIRWARKAFAASLDSSELQVLVVRMFLPGSSVRTPSIVPEQLS 460
           + PVA      EL ++       F  SL +  + V++ RMFL  S +   +++PE  +
Sbjct: 186 VDPVAVIVIFEELAVNDVLFIAVFGESLFNDGVSVVLYRMFLTFSEIGAENLIPEDFA 243


>AF098995-1|AAR30204.1|  634|Caenorhabditis elegans Na/h exchanger
           protein 6, isoform b protein.
          Length = 634

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = -3

Query: 633 ITPVASXTADNELMLDIRWARKAFAASLDSSELQVLVVRMFLPGSSVRTPSIVPEQLS 460
           + PVA      EL ++       F  SL +  + V++ RMFL  S +   +++PE  +
Sbjct: 186 VDPVAVIVIFEELAVNDVLFIAVFGESLFNDGVSVVLYRMFLTFSEIGAENLIPEDFA 243


>U41542-8|AAN39682.1|  437|Caenorhabditis elegans Protein disulfide
           isomerase protein2, isoform b protein.
          Length = 437

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = -1

Query: 323 DFHNNFSSFDWNSRFLDDNLIAGARSAIMRAALSMYFKSAARPFPLPIVFVGVLTDI 153
           +F    +S  +       NL+  ++ +   A L   FK+AA+ F   ++FV + TD+
Sbjct: 179 EFTQETASVIFGGEIKSHNLLFVSKESSEFAKLEQEFKNAAKQFKGKVLFVYINTDV 235


>U41542-6|AAK39152.1|  493|Caenorhabditis elegans Protein disulfide
           isomerase protein2, isoform a protein.
          Length = 493

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = -1

Query: 323 DFHNNFSSFDWNSRFLDDNLIAGARSAIMRAALSMYFKSAARPFPLPIVFVGVLTDI 153
           +F    +S  +       NL+  ++ +   A L   FK+AA+ F   ++FV + TD+
Sbjct: 235 EFTQETASVIFGGEIKSHNLLFVSKESSEFAKLEQEFKNAAKQFKGKVLFVYINTDV 291


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,586,861
Number of Sequences: 27780
Number of extensions: 364803
Number of successful extensions: 972
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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