Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0806
         (695 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    23   2.1  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   2.1  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    21   8.5  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    21   8.5  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     21   8.5  

>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 608 AVXEATGVMCQXWPELLVGTL 670
           A+  A G+MCQ    L+VG L
Sbjct: 283 AIGTAAGMMCQPVGTLIVGAL 303


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 170 GVLTDINIKSASRMLSAMF 114
           GVL+D++IK   R  SA+F
Sbjct: 835 GVLSDLSIKRTERSDSALF 853


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = -1

Query: 593 CSIFVGQGRHLLQV*TALNSKYWLSGCSCRD 501
           C    G   HL      +NSK  L  C+C D
Sbjct: 36  CQAVNGHCSHLCLPAPRINSKSPLLSCACPD 66


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = -1

Query: 593 CSIFVGQGRHLLQV*TALNSKYWLSGCSCRD 501
           C    G   HL      +NSK  L  C+C D
Sbjct: 36  CQAVNGHCSHLCLPAPRINSKSPLLSCACPD 66


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +3

Query: 255 TSNKIVVEKSTVPVKAAEIIMKILRANT 338
           T NK++ E  TV +   EII  I    T
Sbjct: 193 TKNKLIEESKTVFILNNEIIRSIQGTGT 220


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,297
Number of Sequences: 438
Number of extensions: 4937
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)