Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0805
         (589 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    25   1.4  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   4.2  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    24   4.2  
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    23   5.5  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   5.5  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   9.7  
AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse t...    23   9.7  
AJ441131-4|CAD29633.1|  566|Anopheles gambiae putative apyrase/n...    23   9.7  
AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5' nucleo...    23   9.7  

>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
 Frame = +1

Query: 145 YRDLQKAGKELNSDQKVAVA------KYDEVAQTLEFAR--DLSNKLLI*QSLQSVRQKN 300
           +  L  AG+EL+S  KVA+        YD +  TLE     DL+ +L+  + L   +++ 
Sbjct: 125 FSSLMNAGQELDSSLKVAMVLKSMPESYDHLTTTLETRSDDDLTMELVKSKLLDEAQKRM 184

Query: 301 KLKRKPGFVMQQRPTK 348
           +   +   +++  P K
Sbjct: 185 EKSHQSESILRVGPEK 200


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 18/69 (26%), Positives = 35/69 (50%)
 Frame = +1

Query: 31   NLKSRPLRRIRIHQFDKL*RLLXHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKY 210
            N +S+ L+  + HQ DKL +        ++K+++++T  R+  K G +  S  +    KY
Sbjct: 881  NSQSKELKA-KYHQRDKLLKQNDELKLEIKKKENEITKVRNENKDGYDRISGME---QKY 936

Query: 211  DEVAQTLEF 237
              + +  EF
Sbjct: 937  PWIPEDKEF 945


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
 Frame = +1

Query: 127 KSKLTSYR-DLQKAGKELNSDQKVAVAKYDEVAQTLEFARDLSNKLLI*QSLQSVRQKNK 303
           + KL   R D Q+  +E  + ++   AK D     +E     +  + I   L+ ++QKN+
Sbjct: 67  EEKLREQREDAQR--REEEARRREEAAKADNEKLRVEQQETHTTLIAISAQLRDLQQKNQ 124

Query: 304 LKRKPGFVMQQRP 342
           +KR+      Q+P
Sbjct: 125 MKRQQQHQPPQQP 137


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 15/58 (25%), Positives = 25/58 (43%)
 Frame = +3

Query: 405 RTDFINGTNGAAKLTEDDLKILXDLYPEVTPKHELMXKXNLVSPSNNKSCRTPLLLID 578
           RT+  N T GAA  ++    +     P  TP   L  +     PS+++  R  +  +D
Sbjct: 224 RTNAANATAGAAHYSKKSTTVSYQPVPTGTPTRMLNGEPASQRPSSSQMQRPKVQQLD 281


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +3

Query: 447  TEDDLKILXDLYPEVTPK 500
            T+ +LKIL D+ PE+T +
Sbjct: 1029 TKRELKILDDIMPEMTKR 1046


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = +1

Query: 136 LTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLEFARDLSN 255
           + S  DLQ+A   +++ +    ++YD      E  +++SN
Sbjct: 634 ILSTEDLQEAEMMMSTFEDTKRSRYDVTISQAELEKNMSN 673


>AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -3

Query: 272 CYISNLFERSLANSRVWATSSYLA 201
           C I+ +FE  + N+ ++A  SYL+
Sbjct: 9   CAIAKVFELVIYNNLLYACRSYLS 32


>AJ441131-4|CAD29633.1|  566|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 566

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = -3

Query: 161 FCRSRYDVSLLLRFSKLRILWXNNR 87
           +  SRYD + +L+F+ LR+++   R
Sbjct: 455 YSASRYDTADVLQFAGLRVVFNLTR 479


>AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 566

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = -3

Query: 161 FCRSRYDVSLLLRFSKLRILWXNNR 87
           +  SRYD + +L+F+ LR+++   R
Sbjct: 455 YSASRYDTADVLQFAGLRVVFNLTR 479


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 518,404
Number of Sequences: 2352
Number of extensions: 7741
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)