Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0805
(589 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41549-3|AAA83283.2| 245|Caenorhabditis elegans Hypothetical pr... 31 0.80
AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical ... 28 5.7
AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein. 28 5.7
AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein. 28 5.7
AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1 suppres... 28 5.7
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 27 7.5
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 27 7.5
AC006807-1|AAK84615.1| 130|Caenorhabditis elegans Hypothetical ... 27 7.5
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 27 9.9
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 27 9.9
U40802-5|AAK19011.2| 339|Caenorhabditis elegans Hypothetical pr... 27 9.9
>U41549-3|AAA83283.2| 245|Caenorhabditis elegans Hypothetical
protein F22F1.3 protein.
Length = 245
Score = 30.7 bits (66), Expect = 0.80
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +1
Query: 16 QLLMQNLKSRPLRRIRIHQFDKL 84
+LL N KSR RRIRIH DKL
Sbjct: 127 RLLKPNAKSRITRRIRIHVIDKL 149
>AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical
protein Y53C10A.9 protein.
Length = 1564
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = -2
Query: 294 LPHALKRLLYQ*LV*EISCKFKGLGNFIIFSNCNFLIRI*LFSSFLQVTI 145
LPH R+++ + + K++GL +F +F N FL+ L F+Q T+
Sbjct: 966 LPHVTSRVIW---MNDPKIKYEGLASFFLFENIFFLLV--LAGIFIQSTV 1010
>AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 220 AQTLEFARDLSNKLLI*QSLQSVRQKNKLKRKPG 321
AQ +E+ D++N+L + + Q +K +LKR G
Sbjct: 324 AQVVEYGNDVNNRLKMKIAFQPGNEKKRLKRPKG 357
>AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 220 AQTLEFARDLSNKLLI*QSLQSVRQKNKLKRKPG 321
AQ +E+ D++N+L + + Q +K +LKR G
Sbjct: 324 AQVVEYGNDVNNRLKMKIAFQPGNEKKRLKRPKG 357
>AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1
suppressor/dio uptake defective/raf enhancer protein 1
protein.
Length = 909
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 220 AQTLEFARDLSNKLLI*QSLQSVRQKNKLKRKPG 321
AQ +E+ D++N+L + + Q +K +LKR G
Sbjct: 324 AQVVEYGNDVNNRLKMKIAFQPGNEKKRLKRPKG 357
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical protein
R07G3.3a protein.
Length = 1982
Score = 27.5 bits (58), Expect = 7.5
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +3
Query: 336 ETNKIKEVLLILDCLMQMGSADARTDFINGTNGAAKLTEDDLKILXDLYPEVTPKHELMX 515
ET KI +++ M A TD ++ N AKLTE+ K+ L+ K +L
Sbjct: 1192 ETEKIATTAALVEKASLMEKIQALTD-VHNIN--AKLTEEKTKLQAQLHQIQKEKADLEN 1248
Query: 516 KXNLVSPSNNK 548
+ + +S SN +
Sbjct: 1249 QRSRLSASNEE 1259
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical protein
R07G3.3b protein.
Length = 1987
Score = 27.5 bits (58), Expect = 7.5
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +3
Query: 336 ETNKIKEVLLILDCLMQMGSADARTDFINGTNGAAKLTEDDLKILXDLYPEVTPKHELMX 515
ET KI +++ M A TD ++ N AKLTE+ K+ L+ K +L
Sbjct: 1192 ETEKIATTAALVEKASLMEKIQALTD-VHNIN--AKLTEEKTKLQAQLHQIQKEKADLEN 1248
Query: 516 KXNLVSPSNNK 548
+ + +S SN +
Sbjct: 1249 QRSRLSASNEE 1259
>AC006807-1|AAK84615.1| 130|Caenorhabditis elegans Hypothetical
protein Y58A7A.1 protein.
Length = 130
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -1
Query: 202 QLQLFDQNLALFQLSAGHDMMLVYSCVFPNYEFYGSIIVIICRI 71
QL L D L LFQL+ + +ML++ F+ + ++C +
Sbjct: 70 QLDLIDPLLQLFQLTIAYFLMLIFMTFNAYLCFFTVVGEVVCHL 113
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 61 RIHQFDKL*RLLXHKIRNLEKRKSKLTSYR-DLQKAGKELNSDQKVAVAKYDEVAQ 225
+++ +K+ L ++ LE+ + R D++KA +++ D KVA DE+ +
Sbjct: 1029 KVNHLEKIRNKLEQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQENIDEITK 1084
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 61 RIHQFDKL*RLLXHKIRNLEKRKSKLTSYR-DLQKAGKELNSDQKVAVAKYDEVAQ 225
+++ +K+ L ++ LE+ + R D++KA +++ D KVA DE+ +
Sbjct: 1029 KVNHLEKIRNKLEQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQENIDEITK 1084
>U40802-5|AAK19011.2| 339|Caenorhabditis elegans Hypothetical
protein ZC477.5 protein.
Length = 339
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/58 (24%), Positives = 31/58 (53%)
Frame = +3
Query: 405 RTDFINGTNGAAKLTEDDLKILXDLYPEVTPKHELMXKXNLVSPSNNKSCRTPLLLID 578
R F+N +++++E+D+K+ P+ ++E+ + ++S K +T LL D
Sbjct: 223 RVVFVNERESSSRMSENDVKMRLYAVPDHI-QYEITKERRVLSEPEKKKSKTMALLND 279
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,528,279
Number of Sequences: 27780
Number of extensions: 201699
Number of successful extensions: 595
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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