Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0805
(589 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g35810.1 68418.m04303 hypothetical protein 30 1.3
At1g05670.1 68414.m00588 UDP-glucoronosyl/UDP-glucosyl transfera... 30 1.3
At1g65850.1 68414.m07472 disease resistance protein (TIR-NBS-LRR... 29 1.7
At5g16780.1 68418.m01965 SART-1 family protein contains Pfam dom... 29 2.3
At5g42880.1 68418.m05226 hypothetical protein contains Pfam prof... 28 4.0
At3g10310.1 68416.m01237 kinesin motor protein-related similar t... 28 4.0
At3g18900.1 68416.m02400 expressed protein contains Pfam profile... 28 5.3
At1g59720.1 68414.m06720 pentatricopeptide (PPR) repeat-containi... 27 7.0
At1g11400.2 68414.m01310 expressed protein 27 7.0
At1g11400.1 68414.m01309 expressed protein 27 7.0
At4g16950.2 68417.m02557 disease resistance protein (TIR-NBS-LRR... 27 9.3
At4g16950.1 68417.m02556 disease resistance protein (TIR-NBS-LRR... 27 9.3
At4g16890.1 68417.m02549 disease resistance protein (TIR-NBS-LRR... 27 9.3
At4g16860.1 68417.m02547 disease resistance protein (TIR-NBS-LRR... 27 9.3
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 27 9.3
>At5g35810.1 68418.m04303 hypothetical protein
Length = 347
Score = 29.9 bits (64), Expect = 1.3
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 8/107 (7%)
Frame = -1
Query: 589 LGFPSIRSRGVLQLLLFEGETRLXFXINSC---LGVTSGYKSXKIFKSS-----SVNLAA 434
LGFP+ R ++ + L + S L + + + F+++ + L A
Sbjct: 215 LGFPTFRKEFWFEVFIISDSVALLSSVTSIMIFLSILTSRYAEASFQTTLPTKLMLGLLA 274
Query: 433 PFVPFMKSVLASALPICIRQSRISKTSFILLVSAA*RTQASFLACFF 293
FV + VLA + + + + K S ILLV A T SF+ F
Sbjct: 275 LFVSIISMVLAFTATLILIRDQEPKWSLILLVYVASATALSFVVLHF 321
>At1g05670.1 68414.m00588 UDP-glucoronosyl/UDP-glucosyl transferase
family protein similar to UDP-glucose:salicylic acid
glucosyltransferase [Nicotiana tabacum] GI:7385017;
contains Pfam profiles PF00201: UDP-glucoronosyl and
UDP-glucosyl transferase, PF01535: PPR repeat
Length = 1184
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = -1
Query: 118 PNYEFYGSIIVIICRIGVSLSSEEAGFSDFALAAEGIL 5
PN YGSII ++CRI L+ E FS+ + +GIL
Sbjct: 757 PNSYIYGSIIGLLCRI-CKLAEAEEAFSE--MIRQGIL 791
>At1g65850.1 68414.m07472 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1036
Score = 29.5 bits (63), Expect = 1.7
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Frame = -3
Query: 212 SYLATATF*SEFSSFPAFCR-----SRYDVSLLLRFSKLRILWXNNR--HNLSNW 69
+YL+ E+ FP C + Y V L +RFSKL LW NR NL NW
Sbjct: 607 NYLSQKLKILEWDHFPLTCMPSNFCTEYLVELNMRFSKLHKLWEGNRPLANL-NW 660
>At5g16780.1 68418.m01965 SART-1 family protein contains Pfam
domain, PF03343: SART-1 family
Length = 820
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 109 RNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLEFARDLSNK 258
RN++K+KSKL D GKE + K + +T EF R L+ K
Sbjct: 649 RNMDKKKSKLVGIVD-DDGGKESKDKESKDRFKDIRIERTDEFGRTLTPK 697
>At5g42880.1 68418.m05226 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 751
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +1
Query: 100 HKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVA-VAKYDEVAQTLEFARDLSNKLLI*QS 276
HKI+ +E+RK +Q+A E + ++A AKYD + + LE + L +L +
Sbjct: 159 HKIQTIERRKMVDEELEKIQEAMPEYKREAELAEEAKYDAL-EELENTKGLIEELKL--E 215
Query: 277 LQSVRQKNKLKRKPGFVMQQR 339
L+ ++ + ++ + Q R
Sbjct: 216 LEKAEKEEQQAKQDSELAQMR 236
>At3g10310.1 68416.m01237 kinesin motor protein-related similar to
carboxy-terminal kinesin 2 GB:P79955 [Xenopus laevis]
Length = 897
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/65 (24%), Positives = 33/65 (50%)
Frame = +1
Query: 31 NLKSRPLRRIRIHQFDKL*RLLXHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKY 210
+LKS PL + +H+ D++ + L K + + ++ ++ RDL + G ++ A Y
Sbjct: 261 DLKSMPLEELPVHEEDQVLKNLFIKTKQ-DFKEFQVYLQRDLMELGNQMQEMSSAAQGYY 319
Query: 211 DEVAQ 225
V +
Sbjct: 320 KVVEE 324
>At3g18900.1 68416.m02400 expressed protein contains Pfam profile
PF04784: Protein of unknown function, DUF547; contains
TIGRFAM TIGR01640: F-box protein interaction domain
Length = 815
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 109 RNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLEFARDLSNKLLI 267
R +E+ KS L S R L G+ ++SD+ + + DEV E L KL +
Sbjct: 41 REIEQLKSLLKS-RKLHPGGRRVSSDEIDLLLQEDEVLVRREMKTVLGRKLFL 92
>At1g59720.1 68414.m06720 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 638
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 148 DMMLVYSCVFPNYEFYGSIIVIICRIG 68
DMM+ C+ P E YG I+ +I R G
Sbjct: 381 DMMVRDYCIEPALEHYGCIVDLIARAG 407
>At1g11400.2 68414.m01310 expressed protein
Length = 204
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 103 KIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLEFARD 246
+IR L K+K +LT + + A ++LN +Q +K +E Q L+ D
Sbjct: 155 RIRAL-KKKIRLTEAQQQKTASRDLNPEQLEKFSKLEEWRQELKALED 201
>At1g11400.1 68414.m01309 expressed protein
Length = 204
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 103 KIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLEFARD 246
+IR L K+K +LT + + A ++LN +Q +K +E Q L+ D
Sbjct: 155 RIRAL-KKKIRLTEAQQQKTASRDLNPEQLEKFSKLEEWRQELKALED 201
>At4g16950.2 68417.m02557 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.; closest
homolog in Col-0 to RPP5 of clutivar Landsberg erecta.
Length = 1404
Score = 27.1 bits (57), Expect = 9.3
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -3
Query: 173 SFPAFCRSRYDVSLLLRFSKLRILW 99
S P+ ++ Y V+L++++SKL LW
Sbjct: 588 SLPSTFKAEYLVNLIMKYSKLEKLW 612
>At4g16950.1 68417.m02556 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.; closest
homolog in Col-0 to RPP5 of clutivar Landsberg erecta.
Length = 1449
Score = 27.1 bits (57), Expect = 9.3
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -3
Query: 173 SFPAFCRSRYDVSLLLRFSKLRILW 99
S P+ ++ Y V+L++++SKL LW
Sbjct: 588 SLPSTFKAEYLVNLIMKYSKLEKLW 612
>At4g16890.1 68417.m02549 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1301
Score = 27.1 bits (57), Expect = 9.3
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -3
Query: 173 SFPAFCRSRYDVSLLLRFSKLRILW 99
S P+ ++ Y V+L++++SKL LW
Sbjct: 582 SLPSTFKAEYLVNLIMKYSKLEKLW 606
>At4g16860.1 68417.m02547 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1147
Score = 27.1 bits (57), Expect = 9.3
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -3
Query: 173 SFPAFCRSRYDVSLLLRFSKLRILW 99
S P+ ++ Y V+L++++SKL LW
Sbjct: 599 SLPSTFKAEYLVNLIMKYSKLEKLW 623
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -1
Query: 556 LQLLLFEGETRLXFXINSCLGVTSGYKSXKIFKSSSVNLAAP 431
L+L E TRL ++ G+ S YKS K LA+P
Sbjct: 143 LRLSPMEAYTRLIRIVHEVNGIVSAYKSEKYLSDVDSILASP 184
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,882,261
Number of Sequences: 28952
Number of extensions: 184856
Number of successful extensions: 509
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1161268208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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