Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0804
(784 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 68 2e-12
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 64 2e-11
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 63 4e-11
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 40 5e-04
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 39 0.001
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 36 0.007
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 31 0.19
SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 29 0.57
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 29 0.75
SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase Prp16|... 27 3.0
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 27 3.0
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 25 9.3
SPBC839.07 |ibp1||itty bitty phosphatase Ibp1|Schizosaccharomyce... 25 9.3
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 67.7 bits (158), Expect = 2e-12
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 8/75 (10%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARALKGIVKVGAL--DADEHRSVSQKYGVTGFPTIK-IFTGS 426
+APWCG+CK LVP Y+K A L ++ V A+ DAD++R+V +Y V GFPTIK ++ S
Sbjct: 56 YAPWCGYCKKLVPTYQKLASNLHSLLPVTAVDCDADQNRAVCSQYQVQGFPTIKLVYPSS 115
Query: 427 K-----HTPYQGQRT 456
K T Y G R+
Sbjct: 116 KGSSLSSTDYNGDRS 130
Score = 37.1 bits (82), Expect = 0.003
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +2
Query: 581 SKNWS*TAMTSG--LVEFYAPWCGHCKNLEP 667
SKN+ G LV FYAPWCG+CK L P
Sbjct: 38 SKNFRKFVKAKGPSLVVFYAPWCGYCKKLVP 68
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 64.1 bits (149), Expect = 2e-11
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARAL-KGIVKVGALDADEHRSVSQKYGVTGFPTIKIF-TGSK 429
+APWCGHCK+L PEY+ AA L K + + +D E + +Y + G+PT+ +F G +
Sbjct: 47 YAPWCGHCKALAPEYESAADELEKDGISLVEVDCTEEGDLCSEYSIRGYPTLNVFKNGKQ 106
Query: 430 HTPYQGQRTAEGFV 471
+ Y G R + V
Sbjct: 107 ISQYSGPRKHDALV 120
Score = 54.8 bits (126), Expect = 1e-08
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARALK--GIVKVGALDADEHRSVSQKYGVTGFPTIKIF-TGS 426
+APWCGHCK+L P Y+K A V V +DA E+ +S ++GFPTI F
Sbjct: 381 YAPWCGHCKNLAPTYEKLAEEYSDDSNVVVAKIDATEN-DIS--VSISGFPTIMFFKAND 437
Query: 427 KHTP--YQGQRTAE 462
K P Y+G RT E
Sbjct: 438 KVNPVRYEGDRTLE 451
Score = 44.8 bits (101), Expect = 1e-05
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +2
Query: 617 LVEFYAPWCGHCKNLEP 667
LVEFYAPWCGHCKNL P
Sbjct: 377 LVEFYAPWCGHCKNLAP 393
Score = 43.6 bits (98), Expect = 3e-05
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +2
Query: 617 LVEFYAPWCGHCKNLEPHWG*XWPPXLKXR*NWVPWDATVHTTXGVTLPVQGYPTI 784
+V+FYAPWCGHCK L P + K + V D T ++GYPT+
Sbjct: 43 MVKFYAPWCGHCKALAPEYESAADELEKDGISLVEVDCTEEGDLCSEYSIRGYPTL 98
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 63.3 bits (147), Expect = 4e-11
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARALK--GIVKVGALDADEHRSVSQKYGVTGFPTIKIF--TG 423
+A WCGHCKSL P Y++ + V +G +DAD H V+ KY +TGFPT+ F G
Sbjct: 47 YATWCGHCKSLAPVYEELGALFEDHNDVLIGKIDADTHSDVADKYHITGFPTLIWFPPDG 106
Query: 424 SKHTPYQGQRTAE 462
S+ Y R +
Sbjct: 107 SEPVQYSNARDVD 119
Score = 51.6 bits (118), Expect = 1e-07
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARALKG--IVKVGALDADEHRSVSQKYGVTGFPTIKIF-TGS 426
+A WCG+CK L P Y+ + K V++ ++AD + + + V FPTIK F
Sbjct: 166 YADWCGYCKRLAPTYETLGKVFKNEPNVEIVKINADVFADIGRLHEVASFPTIKFFPKDD 225
Query: 427 KHTP--YQGQRTAEGFV 471
K P Y+G R+ E +
Sbjct: 226 KDKPELYEGDRSLESLI 242
Score = 39.1 bits (87), Expect = 7e-04
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2
Query: 617 LVEFYAPWCGHCKNLEP 667
L+EFYA WCGHCK+L P
Sbjct: 43 LIEFYATWCGHCKSLAP 59
Score = 36.7 bits (81), Expect = 0.004
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 617 LVEFYAPWCGHCKNLEP 667
LVEFYA WCG+CK L P
Sbjct: 162 LVEFYADWCGYCKRLAP 178
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 39.5 bits (88), Expect = 5e-04
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF 417
+A WCG CK L P +K + + + A++AD+ ++QK GV PT+ +F
Sbjct: 43 YADWCGPCKYLKPFLEKLSEQNQKASFI-AVNADKFSDIAQKNGVYALPTMVLF 95
Score = 32.7 bits (71), Expect = 0.061
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2
Query: 617 LVEFYAPWCGHCKNLEP 667
+V+FYA WCG CK L+P
Sbjct: 39 VVDFYADWCGPCKYLKP 55
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 38.7 bits (86), Expect = 0.001
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARALKGIVKVGA-LDADEHRSVSQKYGVTGFPTIKIFTGSK 429
+A WCG CK++ P + + A V A ++ DE R ++ GV PT F K
Sbjct: 27 YADWCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQRQIASGLGVKAMPTFVFFENGK 85
Score = 29.5 bits (63), Expect = 0.57
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 584 KNWS*TAMTSGL--VEFYAPWCGHCKNLEP 667
++W T SG V+ YA WCG CK + P
Sbjct: 10 QHWISTIPKSGYLAVDCYADWCGPCKAISP 39
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 35.9 bits (79), Expect = 0.007
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF-TGSKH 432
FA WCG CK++ P++++ + + +D D+ ++ + GV P+ ++ G K
Sbjct: 26 FATWCGPCKAIAPKFEQFSNTYSDATFI-KVDVDQLSEIAAEAGVHAMPSFFLYKNGEKI 84
Query: 433 TPYQGQRTAE 462
G A+
Sbjct: 85 EEIVGANPAK 94
Score = 29.5 bits (63), Expect = 0.57
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 617 LVEFYAPWCGHCKNLEP 667
+V+F+A WCG CK + P
Sbjct: 22 VVDFFATWCGPCKAIAP 38
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 31.1 bits (67), Expect = 0.19
Identities = 13/58 (22%), Positives = 29/58 (50%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSK 429
+APW CK + + + A+ K V + ++A++ +++ + V P + G+K
Sbjct: 28 YAPWAAPCKQMNQVFDQFAKDTKNAVFL-KIEAEKFSDIAESFDVNAVPLFVLIHGAK 84
Score = 25.8 bits (54), Expect = 7.0
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 617 LVEFYAPWCGHCKNL 661
L+ FYAPW CK +
Sbjct: 24 LLNFYAPWAAPCKQM 38
>SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 29.5 bits (63), Expect = 0.57
Identities = 13/60 (21%), Positives = 24/60 (40%)
Frame = +1
Query: 268 CGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSKHTPYQG 447
C C + R +K+ ++ DE + + + + FPT ++F G Y G
Sbjct: 209 CEDCFHWEAVWSSITRNTDERLKMAQVNCDEEKEMCNHFHIKKFPTFRVFQGFDSIQYNG 268
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 29.1 bits (62), Expect = 0.75
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 620 VEFYAPWCGHCKNLEPHW 673
+++Y P CG CK L P W
Sbjct: 47 IKYYLPSCGACKRLGPMW 64
>SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase
Prp16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 27.1 bits (57), Expect = 3.0
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 636 LGVGTARILNLTGAXAGHRT*RXGKTGCPGM--QQFTQQXGSRYQYKGTRP 782
LG+ T ++ ++ A A R R G+TG PG+ + +T+ R ++ T P
Sbjct: 795 LGIDTLQVTPISQANANQRAGRAGRTG-PGIAYRLYTEMAYIREMFETTLP 844
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 149 TGSLALYDSSSDVIELTPSNFDKLVTNSDEIWII 250
TGS + SDV+ L+ S L+ SD WII
Sbjct: 428 TGSPLAHVLCSDVVNLSVSTVFNLLCGSDTTWII 461
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 25.4 bits (53), Expect = 9.3
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 164 LYDSSSDVIELTPSNFDKLVTNSDEIWIIESLHRG 268
L D +D EL + +SDE+W I H G
Sbjct: 191 LSDYKADPSELPTKEYHVFHDHSDEVWQISYSHNG 225
>SPBC839.07 |ibp1||itty bitty phosphatase Ibp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 138
Score = 25.4 bits (53), Expect = 9.3
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 274 HCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGV-TGFPTIKIFTG 423
HC KAAR L I++ ++ E S+SQK + PT+ I G
Sbjct: 69 HCTYSQVRGPKAARVLSEILRNRITESKEKLSLSQKEKLFQNLPTVYILHG 119
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,106,861
Number of Sequences: 5004
Number of extensions: 61551
Number of successful extensions: 180
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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