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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0804
         (784 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)                 86   3e-17
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)              77   1e-14
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)                 75   7e-14
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)                 72   6e-13
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)                 65   7e-11
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)       60   2e-09
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)              57   2e-08
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)              56   3e-08
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)            52   4e-07
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)           48   1e-05
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)           44   1e-04
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)                     43   3e-04
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.021
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)           35   0.065
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)           35   0.065
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)           35   0.085
SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)                   34   0.15 
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)           33   0.20 
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)               33   0.20 
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)               33   0.26 
SB_6800| Best HMM Match : No HMM Matches (HMM E-Value=.)               32   0.60 
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)                32   0.60 
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)                 31   1.4  
SB_55515| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.2  
SB_3993| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   5.6  
SB_43183| Best HMM Match : MethyltransfD12 (HMM E-Value=2)             28   9.8  
SB_43128| Best HMM Match : DUF713 (HMM E-Value=6.7)                    28   9.8  

>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
          Length = 362

 Score = 85.8 bits (203), Expect = 3e-17
 Identities = 42/77 (54%), Positives = 51/77 (66%), Gaps = 5/77 (6%)
 Frame = +1

Query: 256 FAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF-TGSKH 432
           FAPWCGHC+ L PE+ KAA  LKG VKVGALDA  H   + +Y V G+PTIK+F  G K+
Sbjct: 105 FAPWCGHCQRLAPEWAKAATELKGKVKVGALDATVHTVTASRYQVQGYPTIKVFAAGIKN 164

Query: 433 T----PYQGQRTAEGFV 471
           +     YQG RTA   +
Sbjct: 165 SHSVEDYQGGRTASDII 181



 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 29/56 (51%), Positives = 32/56 (57%)
 Frame = +2

Query: 617 LVEFYAPWCGHCKNLEPHWG*XWPPXLKXR*NWVPWDATVHTTXGVTLPVQGYPTI 784
           LVEF+APWCGHC+ L P W       LK +      DATVHT       VQGYPTI
Sbjct: 101 LVEFFAPWCGHCQRLAPEWA-KAATELKGKVKVGALDATVHTVTASRYQVQGYPTI 155



 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 35/99 (35%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
 Frame = +1

Query: 355 DEHRSVSQKYGVTGFPTIKIFTGSKHTP--YQGQRTAEGFVXXXXXXXXXXXXXIL---- 516
           D H+SV   Y + GFPTIKIF  +K++P  Y GQRTA+G V              +    
Sbjct: 2   DVHQSVGGPYNIRGFPTIKIFGANKNSPQDYNGQRTAQGIVDAAMRAAQEAVSQRMSGGG 61

Query: 517 ------XXXXXXXXXXXXXVITLTDSNFKELVLDSDDLW 615
                              V+ LTD+NF++ VL+S DLW
Sbjct: 62  RSSSGGGGRRGGSGGNKEDVVELTDTNFEKEVLNSKDLW 100



 Score = 36.7 bits (81), Expect = 0.021
 Identities = 13/27 (48%), Positives = 21/27 (77%)
 Frame = +2

Query: 173 SSSDVIELTPSNFDKLVTNSDEIWIIE 253
           +  DV+ELT +NF+K V NS ++W++E
Sbjct: 77  NKEDVVELTDTNFEKEVLNSKDLWLVE 103


>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 645

 Score = 77.4 bits (182), Expect = 1e-14
 Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
 Frame = +1

Query: 256 FAPWCGHCKSLVPEYKKAARALK---GIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGS 426
           FAPWCGHCK L PEY+KAA+ L+     + +  +DA     ++QKY V G+PT+K+F   
Sbjct: 201 FAPWCGHCKQLAPEYEKAAQELQKHDPPIPLAIVDATIESELAQKYEVQGYPTLKVFRKG 260

Query: 427 KHTPYQGQRTAEG 465
           K T Y+GQR   G
Sbjct: 261 KATEYKGQRDQYG 273



 Score = 72.5 bits (170), Expect = 3e-13
 Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
 Frame = +1

Query: 256 FAPWCGHCKSLVPEYKKAARALK---GIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGS 426
           +APWCGHCKSL PEY KAA+ +K     V    +DA     ++Q++ V+G+PT+KIF   
Sbjct: 86  YAPWCGHCKSLAPEYAKAAKKMKLNDPPVPFAKMDATVASDIAQRFDVSGYPTLKIFRKG 145

Query: 427 KHTPYQGQRTAEGFV 471
               Y+G R   G V
Sbjct: 146 TPYEYEGPREESGIV 160



 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
 Frame = +2

Query: 617 LVEFYAPWCGHCKNLEPHWG*XWPPXLKXR*NWVPW---DATVHTTXGVTLPVQGYPTI 784
           LVEFYAPWCGHCK+L P +       +K     VP+   DATV +       V GYPT+
Sbjct: 82  LVEFYAPWCGHCKSLAPEYA-KAAKKMKLNDPPVPFAKMDATVASDIAQRFDVSGYPTL 139



 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
 Frame = +2

Query: 617 LVEFYAPWCGHCKNLEPHWG*XWPPXLKXR*NWVPW---DATVHTTXGVTLPVQGYPTI 784
           LVEF+APWCGHCK L P +       L+     +P    DAT+ +       VQGYPT+
Sbjct: 197 LVEFFAPWCGHCKQLAPEYE-KAAQELQKHDPPIPLAIVDATIESELAQKYEVQGYPTL 254



 Score = 29.5 bits (63), Expect = 3.2
 Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +2

Query: 617 LVEFYAPWCGHCKNLEPHWG*XWPPXLKXR*NWV--PWDATVHTTXGVTLPVQGYPTI 784
           L+EFYAPWCG    LEP +        +   N V    DAT +     T  V+G+PTI
Sbjct: 547 LIEFYAPWCGIA--LEPTFK-KLGKHFRNDKNIVIAKIDATANDVPS-TYAVEGFPTI 600


>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
          Length = 536

 Score = 74.9 bits (176), Expect = 7e-14
 Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
 Frame = +1

Query: 256 FAPWCGHCKSLVPEYKKAARAL---KGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGS 426
           +APWCGHCK+L PEY KAA  L   K  +K+  +DA     + +K+ V G+PTIK F   
Sbjct: 49  YAPWCGHCKALAPEYAKAAGQLKSEKSEIKLAKVDATAETKLGEKFQVQGYPTIKFFKDG 108

Query: 427 KHTPYQGQRTAEGFV 471
           K + Y G RTA   V
Sbjct: 109 KPSEYAGGRTAPEIV 123



 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 29/59 (49%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
 Frame = +2

Query: 617 LVEFYAPWCGHCKNLEPHWG*XWPPXLKXR*NWVPW---DATVHTTXGVTLPVQGYPTI 784
           LVEFYAPWCGHCK L P +       LK   + +     DAT  T  G    VQGYPTI
Sbjct: 45  LVEFYAPWCGHCKALAPEYA-KAAGQLKSEKSEIKLAKVDATAETKLGEKFQVQGYPTI 102



 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
 Frame = +1

Query: 208 FRQISYKFRRNLDH*VFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYG 387
           F +++    +N+    +APWCGHCK L P + +     K    +     D   +  +   
Sbjct: 394 FDEVARNKDKNVFVEFYAPWCGHCKQLAPIWDQLGEKYKDHADIVVAKMDSTANEVEGVK 453

Query: 388 VTGFPTIKIF-TGSKHTPYQGQRTAEGFV 471
           V  FPTIK F    +   Y G RT + FV
Sbjct: 454 VHSFPTIKYFPKEGEAVDYNGGRTLDDFV 482



 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 15/18 (83%), Positives = 15/18 (83%)
 Frame = +2

Query: 620 VEFYAPWCGHCKNLEPHW 673
           VEFYAPWCGHCK L P W
Sbjct: 407 VEFYAPWCGHCKQLAPIW 424


>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
          Length = 1056

 Score = 71.7 bits (168), Expect = 6e-13
 Identities = 36/77 (46%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
 Frame = +1

Query: 256 FAPWCGHCKSLVPEYKKAARALK---GIVKVGALDADE-HRSVSQKYGVTGFPTIKIF-T 420
           FAPWCGHCK L PEY+ AA ALK     V +  +D  E  +    KYGV+G+PT+KIF  
Sbjct: 563 FAPWCGHCKRLAPEYETAAEALKKNDPPVPLAKVDCTEAGKDTCSKYGVSGYPTLKIFRN 622

Query: 421 GSKHTPYQGQRTAEGFV 471
           G     Y G R + G +
Sbjct: 623 GEMSKDYDGPRDSSGII 639



 Score = 45.2 bits (102), Expect = 6e-05
 Identities = 15/19 (78%), Positives = 18/19 (94%)
 Frame = +2

Query: 617 LVEFYAPWCGHCKNLEPHW 673
           L+EFYAPWCGHCK+LEP +
Sbjct: 884 LIEFYAPWCGHCKSLEPKY 902



 Score = 41.5 bits (93), Expect = 7e-04
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +2

Query: 617 LVEFYAPWCGHCKNLEPHW 673
           LVEF+APWCGHCK L P +
Sbjct: 559 LVEFFAPWCGHCKRLAPEY 577



 Score = 41.5 bits (93), Expect = 7e-04
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
 Frame = +1

Query: 256  FAPWCGHCKSLVPEYKKAARALKGI--VKVGALDADEHRSVSQKYGVTGFPTIKI 414
            +APWCGHCKSL P+Y +    L+ +  + +  +DA  +      + V G   I I
Sbjct: 888  YAPWCGHCKSLEPKYNELGEKLQDVKDIVIAKMDATAN-DAPPNFSVQGIIIISI 941


>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
          Length = 295

 Score = 64.9 bits (151), Expect = 7e-11
 Identities = 31/76 (40%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
 Frame = +1

Query: 256 FAPWCGHCKSLVPEYKKAARAL--KGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSK 429
           +APWCGHCK L P Y++   A      V +  +DAD  R +  ++ V GFPTIK F    
Sbjct: 47  YAPWCGHCKQLAPTYEQLGEAYTQSSDVIIAKVDADGDRDLGSRFDVKGFPTIKYFPKGS 106

Query: 430 HTP--YQGQRTAEGFV 471
            TP  Y G R    F+
Sbjct: 107 TTPEEYNGGRDINDFI 122



 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = +2

Query: 617 LVEFYAPWCGHCKNLEP 667
           LVEFYAPWCGHCK L P
Sbjct: 43  LVEFYAPWCGHCKQLAP 59


>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
          Length = 271

 Score = 60.5 bits (140), Expect = 2e-09
 Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
 Frame = +1

Query: 256 FAPWCGHCKSLVPEYKKAARAL---KGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGS 426
           FAPWCGHC  + P Y KAA+ L        + A+D  +H+ V++K  + G+PT+K++  S
Sbjct: 75  FAPWCGHCNEMKPNYYKAAQVLHDEDANCNLAAVDCTKHKDVAKKVALAGYPTVKLYKAS 134



 Score = 55.6 bits (128), Expect = 4e-08
 Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
 Frame = +1

Query: 256 FAPWCGHCKSLVPEYKKAARALKGIVK--VGALDADEHRSVSQKYGVTGFPTIKIFTGSK 429
           +APWCGHCK+  P+Y+KAA   K         LD  +   V  K  V G+PT++ +   K
Sbjct: 172 YAPWCGHCKNAKPKYEKAAETFKDQPNRVFAKLDCTKFGDVCDKEEVNGYPTLRYYLYGK 231

Query: 430 H-TPYQGQRTAEGFV 471
               Y G R  E  +
Sbjct: 232 FVVEYDGDRVTEDLI 246



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +2

Query: 617 LVEFYAPWCGHCKNLEPHW 673
           LV FYAPWCGHCKN +P +
Sbjct: 168 LVMFYAPWCGHCKNAKPKY 186



 Score = 37.1 bits (82), Expect = 0.016
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = +2

Query: 617 LVEFYAPWCGHCKNLEPHW--G*XWPPXLKXR*NWVPWDATVHTTXGVTLPVQGYPTI 784
           LV ++APWCGHC  ++P++              N    D T H      + + GYPT+
Sbjct: 71  LVMYFAPWCGHCNEMKPNYYKAAQVLHDEDANCNLAAVDCTKHKDVAKKVALAGYPTV 128


>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 564

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
 Frame = +1

Query: 256 FAPWCGHCKSLVPEYKKAARAL--KGIVKVGALDADEHRS--VSQKYGVTGFPTIKIFTG 423
           +APWC HC+ L+P+ + AA AL  KG+ +   +D  + RS  +   + + G+P++K+F  
Sbjct: 45  YAPWCHHCQELLPQLEGAANALAAKGLFQFAKVDCTDPRSKVLCDNFKIEGYPSVKLFKF 104

Query: 424 SKHT-PYQGQRTAEGFV 471
            K+   Y GQRT    V
Sbjct: 105 GKYAGDYIGQRTDAALV 121



 Score = 35.5 bits (78), Expect = 0.049
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +2

Query: 617 LVEFYAPWCGHCKNLEP 667
           LV+FYAPWC HC+ L P
Sbjct: 41  LVDFYAPWCHHCQELLP 57


>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 711

 Score = 56.0 bits (129), Expect = 3e-08
 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
 Frame = +1

Query: 256 FAPWCGHCKSLVPEYKKAARALKG-IVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSKH 432
           FAPWC  C  L+PEY+KAAR+  G  V  G +D   H  +  +Y +  +PT  ++  S+ 
Sbjct: 310 FAPWCPPCMRLLPEYRKAARSFVGKPVGFGTVDCTVHSQLCHQYNIRSYPTTILYNNSQP 369

Query: 433 TPYQGQRTA 459
             + G   A
Sbjct: 370 HQFIGHHNA 378



 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 17/57 (29%), Positives = 35/57 (61%)
 Frame = +1

Query: 256 FAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGS 426
           +APWCG C    P+Y++ A+ LKG V+   ++ ++   +  +  +  +PT++++ GS
Sbjct: 459 YAPWCGPCMRFAPKYEQLAKMLKGKVRAAKVNCEQDYGLCSEANIHSYPTVRLYLGS 515



 Score = 33.5 bits (73), Expect = 0.20
 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
 Frame = +2

Query: 413 YSQGASTHHIKVR-GQQKDXXXXXXXXXXXXHMKSWARNRVGPLLISLMSLL*QTATSKN 589
           +   A T  I+V   QQ+D            HM  WA N + P ++S ++       SKN
Sbjct: 393 FRSAAFTGDIRVPCAQQEDWVHQGWRDVDSLHM--WAYNYL-PSIVSEVN-------SKN 442

Query: 590 WS*TAMTSG---LVEFYAPWCGHCKNLEPHW 673
           +    + S    +V+FYAPWCG C    P +
Sbjct: 443 FFTDVLASEDAWVVDFYAPWCGPCMRFAPKY 473



 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/54 (29%), Positives = 24/54 (44%)
 Frame = +2

Query: 620 VEFYAPWCGHCKNLEPHWG*XWPPXLKXR*NWVPWDATVHTTXGVTLPVQGYPT 781
           V+F+APWC  C  L P +       +     +   D TVH+       ++ YPT
Sbjct: 307 VDFFAPWCPPCMRLLPEYRKAARSFVGKPVGFGTVDCTVHSQLCHQYNIRSYPT 360


>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
          Length = 386

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
 Frame = +1

Query: 256 FAPWCGHCKSLVPEYKKAARALKGIVKVG---ALDADEHRSVSQKYGVTGFPT 405
           +APWCGHCK++ PEY  AA+ LK     G   A+DA +  ++ +++ V G+PT
Sbjct: 107 YAPWCGHCKAMKPEYVDAAQTLKEQEIPGVLAAVDATKEAALGKRFKVEGYPT 159



 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 24/59 (40%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = +2

Query: 611 SGLVEFYAPWCGHCKNLEPHWG*XWPPXLKXR*NWV--PWDATVHTTXGVTLPVQGYPT 781
           S LV FYAPWCGHCK ++P +        +     V    DAT     G    V+GYPT
Sbjct: 101 SVLVMFYAPWCGHCKAMKPEYVDAAQTLKEQEIPGVLAAVDATKEAALGKRFKVEGYPT 159



 Score = 38.3 bits (85), Expect = 0.007
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = +2

Query: 617 LVEFYAPWCGHCKNLEP 667
           LV FYAPWCGHCK  +P
Sbjct: 216 LVMFYAPWCGHCKKAKP 232



 Score = 35.9 bits (79), Expect = 0.037
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +1

Query: 256 FAPWCGHCKSLVPEYKKAAR 315
           +APWCGHCK   PE   AA+
Sbjct: 220 YAPWCGHCKKAKPELMSAAK 239


>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
          Length = 70

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 18/23 (78%), Positives = 19/23 (82%)
 Frame = +1

Query: 256 FAPWCGHCKSLVPEYKKAARALK 324
           FAPWCGHCK L PEY+ AA ALK
Sbjct: 38  FAPWCGHCKRLAPEYETAAEALK 60



 Score = 41.5 bits (93), Expect = 7e-04
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +2

Query: 617 LVEFYAPWCGHCKNLEPHW 673
           LVEF+APWCGHCK L P +
Sbjct: 34  LVEFFAPWCGHCKRLAPEY 52


>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
          Length = 472

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 13/85 (15%)
 Frame = +1

Query: 256 FAPWCGHCKSLVPEYKKAARAL----KGIVKVGALDADEH----RSVSQKYGVTGFPTIK 411
           +APWC HCK + P+YK  A+ L       V++  +D   +    +   +KY V   PTI 
Sbjct: 159 YAPWCFHCKKMAPDYKDVAKELLILSHNSVRLAKVDCSANNMATKKTCKKYNVKFLPTIY 218

Query: 412 IFTGSKHT-PYQG----QRTAEGFV 471
           +F   K    ++G    +++ +GFV
Sbjct: 219 LFHDGKFVEEFEGNNRNKKSIKGFV 243



 Score = 37.1 bits (82), Expect = 0.016
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = +2

Query: 617 LVEFYAPWCGHCKNLEPHW 673
           LV+FYAPWC HCK + P +
Sbjct: 155 LVDFYAPWCFHCKKMAPDY 173



 Score = 33.9 bits (74), Expect = 0.15
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +2

Query: 617 LVEFYAPWCGHCKNLEP 667
           LV+FYAPWC  C+ L P
Sbjct: 72  LVDFYAPWCSDCQRLSP 88



 Score = 28.3 bits (60), Expect = 7.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 256 FAPWCGHCKSLVPEYKKAARALK 324
           +APWC  C+ L P +  AA  L+
Sbjct: 76  YAPWCSDCQRLSPLFDTAALQLR 98


>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
          Length = 308

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 20/53 (37%), Positives = 28/53 (52%)
 Frame = +1

Query: 259 APWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF 417
           A WCG CKS+ P Y   +   K  V +  +D D  + ++ K GVT  PT + F
Sbjct: 36  ASWCGPCKSIAPVYSGLSEKYKQAVFL-KIDVDVCQELAAKQGVTAMPTFQFF 87


>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 488

 Score = 36.7 bits (81), Expect = 0.021
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
 Frame = +1

Query: 256 FAPWCGHCKSLVPEYKKAARAL----KGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTG 423
           +APWC  C +L P+Y+KAAR L    K ++    ++ +  ++     GV  + T+  +T 
Sbjct: 47  YAPWCSDCDNLRPKYEKAARDLAKEHKFVMAKALMNTNSTQTTCLPMGVHYWRTLLAYTI 106

Query: 424 SKH 432
             H
Sbjct: 107 GVH 109



 Score = 35.9 bits (79), Expect = 0.037
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +2

Query: 617 LVEFYAPWCGHCKNLEPHW 673
           LV+FYAPWC  C NL P +
Sbjct: 43  LVDFYAPWCSDCDNLRPKY 61


>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
          Length = 186

 Score = 35.1 bits (77), Expect = 0.065
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 620 VEFYAPWCGHCKNLEPHW 673
           V+FYAPWC HC  L P W
Sbjct: 111 VKFYAPWCIHCIKLAPIW 128



 Score = 31.9 bits (69), Expect = 0.60
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = +1

Query: 256 FAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF-TGSKH 432
           +APWC HC  L P +++ A   K        +AD   ++S+   + G+PT+ +F  G + 
Sbjct: 114 YAPWCIHCIKLAPIWERLAEDFKD-------NAD--ITISK---INGYPTLMLFKDGVQK 161

Query: 433 TPYQGQR 453
             Y G R
Sbjct: 162 KEYSGNR 168


>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
          Length = 456

 Score = 35.1 bits (77), Expect = 0.065
 Identities = 14/53 (26%), Positives = 26/53 (49%)
 Frame = +1

Query: 259 APWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF 417
           A WCG CKS+ P +   +     +V +  +D D+ +  ++  G+   PT   +
Sbjct: 37  ATWCGPCKSIAPVFTNLSMKFMDVVFL-KVDVDQCQLTAESCGIRAMPTFHFY 88



 Score = 28.3 bits (60), Expect = 7.4
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +2

Query: 617 LVEFYAPWCGHCKNLEP 667
           +++F A WCG CK++ P
Sbjct: 32  VIDFTATWCGPCKSIAP 48


>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
          Length = 975

 Score = 34.7 bits (76), Expect = 0.085
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +1

Query: 256 FAPWCGHCKSLVPEYKKAARALKGI--VKVGALDADEHRSVSQKYGVTGFPTIKIFTGSK 429
           + PWCG C +  P     AR  + I  V V  +DAD++  +     V+ +P+I +F   +
Sbjct: 543 YTPWCGMCINFAPVLLAVARFFQDISQVSVTRIDADQN-DLPWNLTVSSYPSIILFPAGR 601



 Score = 30.3 bits (65), Expect = 1.8
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +2

Query: 617 LVEFYAPWCGHCKNLEP 667
           L+ FY PWCG C N  P
Sbjct: 539 LLVFYTPWCGMCINFAP 555


>SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)
          Length = 664

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = +1

Query: 256 FAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF 417
           +APWCG  +  V E+  AA  L G V   A++     S  +KY +  FP   ++
Sbjct: 460 YAPWCGQSRRAVEEFNIAASLLYGKVTFIAINC-WAGSCREKYTLDSFPKFFVY 512


>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
          Length = 438

 Score = 33.5 bits (73), Expect = 0.20
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 259 APWCGHCKSLVPEYKKAARALKGIVKVGALDAD 357
           A WCG C+ + P++++ A+  KG VK   +D D
Sbjct: 20  ATWCGPCRMIGPKFEEMAKEFKG-VKCAKVDVD 51


>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 111

 Score = 33.5 bits (73), Expect = 0.20
 Identities = 17/57 (29%), Positives = 23/57 (40%)
 Frame = +1

Query: 259 APWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSK 429
           A WC  CK L P          G V +  +D D    ++  +GV   PT+    G K
Sbjct: 46  ACWCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGK 102


>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 80

 Score = 33.1 bits (72), Expect = 0.26
 Identities = 16/55 (29%), Positives = 22/55 (40%)
 Frame = +1

Query: 265 WCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSK 429
           WC  CK L P          G V +  +D D    ++  +GV   PT+    G K
Sbjct: 2   WCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGK 56


>SB_6800| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 141

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
 Frame = +1

Query: 7   RVYFTYLSYTL*CAVNLDLNKFYNRLFINSVKFHNVTRIFYRYLALCNGVLGPLRFVF-- 180
           RVY+ YLS  +        + F N   I+S + H+ +R++YRYL+  N +L      F  
Sbjct: 31  RVYYKYLSNRISKFFASSFHTFENLRRISSDR-HSFSRVYYRYLS--NRILKFFASSFHT 87

Query: 181 ----RRYRADTE*FRQISYKFRRN 240
               RR  +D   F ++ YK+  N
Sbjct: 88  FENLRRISSDRHSFSRVYYKYLSN 111


>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 94

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 256 FAPWCGHCKSLVPEYKKAARALKGIVKVGALDADE 360
           +A WCG C+ + P++KK A      V    +D DE
Sbjct: 38  YAEWCGPCRQIKPKFKKMALEEFKDVFFAKIDVDE 72



 Score = 31.1 bits (67), Expect = 1.1
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = +2

Query: 617 LVEFYAPWCGHCKNLEP 667
           +++FYA WCG C+ ++P
Sbjct: 34  VIDFYAEWCGPCRQIKP 50


>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
          Length = 335

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
 Frame = +1

Query: 256 FAPWCGHCKSLVPEYKKAAR--ALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSK 429
           +APW  HC+ ++  + + A   A +  + VG  +A E   ++ +Y +  +P  + F    
Sbjct: 51  YAPWDDHCQRILQIFDQVADEFADRDDIVVGKSNAYEDVKIATRYWIDRYPMFRYFIKGS 110

Query: 430 HT--PYQGQRTAEGFV 471
            T   Y G    + F+
Sbjct: 111 TTEETYDGGFKPDDFI 126


>SB_55515| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 215

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
 Frame = +1

Query: 7   RVYFTYLSYTL*CAVNLDLNKFYNRLFINSVKFHNVTRIFYRYLALCNGVLGPLRF---- 174
           RVY+ YLS  +        + F N   I+S + H+ +R++Y+YL+          F    
Sbjct: 103 RVYYKYLSNRISKFFASSFHTFENLRRISSDR-HSFSRVYYKYLSNRISKFFASSFHTSE 161

Query: 175 VFRRYRADTE*FRQISYKFRRN 240
             RR  +D   F ++ YK+  N
Sbjct: 162 NLRRISSDRHSFSRVYYKYLSN 183


>SB_3993| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 543

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -3

Query: 560 MTSDLSEEDPLDFLPKISYAFSLAA 486
           +T D S+E+ +D  PKI  AFSLA+
Sbjct: 169 LTKDDSDEETVDTFPKIVSAFSLAS 193


>SB_43183| Best HMM Match : MethyltransfD12 (HMM E-Value=2)
          Length = 604

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = +1

Query: 7   RVYFTYLSYTL*CAVNLDLNKFYNRLFINSVKFHNVTRIFYRYLA 141
           RVY+ YLS  +        + F N   I+S + H+ +R++Y+YL+
Sbjct: 168 RVYYKYLSNRISKFFASSFHTFENLRRISSDR-HSFSRVYYKYLS 211


>SB_43128| Best HMM Match : DUF713 (HMM E-Value=6.7)
          Length = 251

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = +1

Query: 7   RVYFTYLSYTL*CAVNLDLNKFYNRLFINSVKFHNVTRIFYRYLA 141
           RVY+ YLS  +        + F N   I+S + H+ +R++Y+YL+
Sbjct: 177 RVYYKYLSNRISKFFASSFHTFENLRRISSDR-HSFSRVYYKYLS 220


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,737,984
Number of Sequences: 59808
Number of extensions: 481112
Number of successful extensions: 961
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2143884611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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