Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0804
(784 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 86 3e-17
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 75 7e-14
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 72 6e-13
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 65 7e-11
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 60 2e-09
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 52 4e-07
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 48 1e-05
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 44 1e-04
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 43 3e-04
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.021
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 35 0.065
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 35 0.065
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 35 0.085
SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058) 34 0.15
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 33 0.20
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_6800| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.60
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.60
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 31 1.4
SB_55515| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_3993| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_43183| Best HMM Match : MethyltransfD12 (HMM E-Value=2) 28 9.8
SB_43128| Best HMM Match : DUF713 (HMM E-Value=6.7) 28 9.8
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 85.8 bits (203), Expect = 3e-17
Identities = 42/77 (54%), Positives = 51/77 (66%), Gaps = 5/77 (6%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF-TGSKH 432
FAPWCGHC+ L PE+ KAA LKG VKVGALDA H + +Y V G+PTIK+F G K+
Sbjct: 105 FAPWCGHCQRLAPEWAKAATELKGKVKVGALDATVHTVTASRYQVQGYPTIKVFAAGIKN 164
Query: 433 T----PYQGQRTAEGFV 471
+ YQG RTA +
Sbjct: 165 SHSVEDYQGGRTASDII 181
Score = 60.9 bits (141), Expect = 1e-09
Identities = 29/56 (51%), Positives = 32/56 (57%)
Frame = +2
Query: 617 LVEFYAPWCGHCKNLEPHWG*XWPPXLKXR*NWVPWDATVHTTXGVTLPVQGYPTI 784
LVEF+APWCGHC+ L P W LK + DATVHT VQGYPTI
Sbjct: 101 LVEFFAPWCGHCQRLAPEWA-KAATELKGKVKVGALDATVHTVTASRYQVQGYPTI 155
Score = 54.0 bits (124), Expect = 1e-07
Identities = 35/99 (35%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Frame = +1
Query: 355 DEHRSVSQKYGVTGFPTIKIFTGSKHTP--YQGQRTAEGFVXXXXXXXXXXXXXIL---- 516
D H+SV Y + GFPTIKIF +K++P Y GQRTA+G V +
Sbjct: 2 DVHQSVGGPYNIRGFPTIKIFGANKNSPQDYNGQRTAQGIVDAAMRAAQEAVSQRMSGGG 61
Query: 517 ------XXXXXXXXXXXXXVITLTDSNFKELVLDSDDLW 615
V+ LTD+NF++ VL+S DLW
Sbjct: 62 RSSSGGGGRRGGSGGNKEDVVELTDTNFEKEVLNSKDLW 100
Score = 36.7 bits (81), Expect = 0.021
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +2
Query: 173 SSSDVIELTPSNFDKLVTNSDEIWIIE 253
+ DV+ELT +NF+K V NS ++W++E
Sbjct: 77 NKEDVVELTDTNFEKEVLNSKDLWLVE 103
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 77.4 bits (182), Expect = 1e-14
Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARALK---GIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGS 426
FAPWCGHCK L PEY+KAA+ L+ + + +DA ++QKY V G+PT+K+F
Sbjct: 201 FAPWCGHCKQLAPEYEKAAQELQKHDPPIPLAIVDATIESELAQKYEVQGYPTLKVFRKG 260
Query: 427 KHTPYQGQRTAEG 465
K T Y+GQR G
Sbjct: 261 KATEYKGQRDQYG 273
Score = 72.5 bits (170), Expect = 3e-13
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARALK---GIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGS 426
+APWCGHCKSL PEY KAA+ +K V +DA ++Q++ V+G+PT+KIF
Sbjct: 86 YAPWCGHCKSLAPEYAKAAKKMKLNDPPVPFAKMDATVASDIAQRFDVSGYPTLKIFRKG 145
Query: 427 KHTPYQGQRTAEGFV 471
Y+G R G V
Sbjct: 146 TPYEYEGPREESGIV 160
Score = 50.8 bits (116), Expect = 1e-06
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +2
Query: 617 LVEFYAPWCGHCKNLEPHWG*XWPPXLKXR*NWVPW---DATVHTTXGVTLPVQGYPTI 784
LVEFYAPWCGHCK+L P + +K VP+ DATV + V GYPT+
Sbjct: 82 LVEFYAPWCGHCKSLAPEYA-KAAKKMKLNDPPVPFAKMDATVASDIAQRFDVSGYPTL 139
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +2
Query: 617 LVEFYAPWCGHCKNLEPHWG*XWPPXLKXR*NWVPW---DATVHTTXGVTLPVQGYPTI 784
LVEF+APWCGHCK L P + L+ +P DAT+ + VQGYPT+
Sbjct: 197 LVEFFAPWCGHCKQLAPEYE-KAAQELQKHDPPIPLAIVDATIESELAQKYEVQGYPTL 254
Score = 29.5 bits (63), Expect = 3.2
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 617 LVEFYAPWCGHCKNLEPHWG*XWPPXLKXR*NWV--PWDATVHTTXGVTLPVQGYPTI 784
L+EFYAPWCG LEP + + N V DAT + T V+G+PTI
Sbjct: 547 LIEFYAPWCGIA--LEPTFK-KLGKHFRNDKNIVIAKIDATANDVPS-TYAVEGFPTI 600
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 74.9 bits (176), Expect = 7e-14
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARAL---KGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGS 426
+APWCGHCK+L PEY KAA L K +K+ +DA + +K+ V G+PTIK F
Sbjct: 49 YAPWCGHCKALAPEYAKAAGQLKSEKSEIKLAKVDATAETKLGEKFQVQGYPTIKFFKDG 108
Query: 427 KHTPYQGQRTAEGFV 471
K + Y G RTA V
Sbjct: 109 KPSEYAGGRTAPEIV 123
Score = 52.8 bits (121), Expect = 3e-07
Identities = 29/59 (49%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +2
Query: 617 LVEFYAPWCGHCKNLEPHWG*XWPPXLKXR*NWVPW---DATVHTTXGVTLPVQGYPTI 784
LVEFYAPWCGHCK L P + LK + + DAT T G VQGYPTI
Sbjct: 45 LVEFYAPWCGHCKALAPEYA-KAAGQLKSEKSEIKLAKVDATAETKLGEKFQVQGYPTI 102
Score = 49.6 bits (113), Expect = 3e-06
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +1
Query: 208 FRQISYKFRRNLDH*VFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYG 387
F +++ +N+ +APWCGHCK L P + + K + D + +
Sbjct: 394 FDEVARNKDKNVFVEFYAPWCGHCKQLAPIWDQLGEKYKDHADIVVAKMDSTANEVEGVK 453
Query: 388 VTGFPTIKIF-TGSKHTPYQGQRTAEGFV 471
V FPTIK F + Y G RT + FV
Sbjct: 454 VHSFPTIKYFPKEGEAVDYNGGRTLDDFV 482
Score = 44.0 bits (99), Expect = 1e-04
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +2
Query: 620 VEFYAPWCGHCKNLEPHW 673
VEFYAPWCGHCK L P W
Sbjct: 407 VEFYAPWCGHCKQLAPIW 424
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 71.7 bits (168), Expect = 6e-13
Identities = 36/77 (46%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARALK---GIVKVGALDADE-HRSVSQKYGVTGFPTIKIF-T 420
FAPWCGHCK L PEY+ AA ALK V + +D E + KYGV+G+PT+KIF
Sbjct: 563 FAPWCGHCKRLAPEYETAAEALKKNDPPVPLAKVDCTEAGKDTCSKYGVSGYPTLKIFRN 622
Query: 421 GSKHTPYQGQRTAEGFV 471
G Y G R + G +
Sbjct: 623 GEMSKDYDGPRDSSGII 639
Score = 45.2 bits (102), Expect = 6e-05
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +2
Query: 617 LVEFYAPWCGHCKNLEPHW 673
L+EFYAPWCGHCK+LEP +
Sbjct: 884 LIEFYAPWCGHCKSLEPKY 902
Score = 41.5 bits (93), Expect = 7e-04
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 617 LVEFYAPWCGHCKNLEPHW 673
LVEF+APWCGHCK L P +
Sbjct: 559 LVEFFAPWCGHCKRLAPEY 577
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARALKGI--VKVGALDADEHRSVSQKYGVTGFPTIKI 414
+APWCGHCKSL P+Y + L+ + + + +DA + + V G I I
Sbjct: 888 YAPWCGHCKSLEPKYNELGEKLQDVKDIVIAKMDATAN-DAPPNFSVQGIIIISI 941
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 64.9 bits (151), Expect = 7e-11
Identities = 31/76 (40%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARAL--KGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSK 429
+APWCGHCK L P Y++ A V + +DAD R + ++ V GFPTIK F
Sbjct: 47 YAPWCGHCKQLAPTYEQLGEAYTQSSDVIIAKVDADGDRDLGSRFDVKGFPTIKYFPKGS 106
Query: 430 HTP--YQGQRTAEGFV 471
TP Y G R F+
Sbjct: 107 TTPEEYNGGRDINDFI 122
Score = 42.3 bits (95), Expect = 4e-04
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +2
Query: 617 LVEFYAPWCGHCKNLEP 667
LVEFYAPWCGHCK L P
Sbjct: 43 LVEFYAPWCGHCKQLAP 59
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 60.5 bits (140), Expect = 2e-09
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARAL---KGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGS 426
FAPWCGHC + P Y KAA+ L + A+D +H+ V++K + G+PT+K++ S
Sbjct: 75 FAPWCGHCNEMKPNYYKAAQVLHDEDANCNLAAVDCTKHKDVAKKVALAGYPTVKLYKAS 134
Score = 55.6 bits (128), Expect = 4e-08
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARALKGIVK--VGALDADEHRSVSQKYGVTGFPTIKIFTGSK 429
+APWCGHCK+ P+Y+KAA K LD + V K V G+PT++ + K
Sbjct: 172 YAPWCGHCKNAKPKYEKAAETFKDQPNRVFAKLDCTKFGDVCDKEEVNGYPTLRYYLYGK 231
Query: 430 H-TPYQGQRTAEGFV 471
Y G R E +
Sbjct: 232 FVVEYDGDRVTEDLI 246
Score = 41.1 bits (92), Expect = 0.001
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 617 LVEFYAPWCGHCKNLEPHW 673
LV FYAPWCGHCKN +P +
Sbjct: 168 LVMFYAPWCGHCKNAKPKY 186
Score = 37.1 bits (82), Expect = 0.016
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +2
Query: 617 LVEFYAPWCGHCKNLEPHW--G*XWPPXLKXR*NWVPWDATVHTTXGVTLPVQGYPTI 784
LV ++APWCGHC ++P++ N D T H + + GYPT+
Sbjct: 71 LVMYFAPWCGHCNEMKPNYYKAAQVLHDEDANCNLAAVDCTKHKDVAKKVALAGYPTV 128
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 56.8 bits (131), Expect = 2e-08
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARAL--KGIVKVGALDADEHRS--VSQKYGVTGFPTIKIFTG 423
+APWC HC+ L+P+ + AA AL KG+ + +D + RS + + + G+P++K+F
Sbjct: 45 YAPWCHHCQELLPQLEGAANALAAKGLFQFAKVDCTDPRSKVLCDNFKIEGYPSVKLFKF 104
Query: 424 SKHT-PYQGQRTAEGFV 471
K+ Y GQRT V
Sbjct: 105 GKYAGDYIGQRTDAALV 121
Score = 35.5 bits (78), Expect = 0.049
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2
Query: 617 LVEFYAPWCGHCKNLEP 667
LV+FYAPWC HC+ L P
Sbjct: 41 LVDFYAPWCHHCQELLP 57
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 56.0 bits (129), Expect = 3e-08
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARALKG-IVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSKH 432
FAPWC C L+PEY+KAAR+ G V G +D H + +Y + +PT ++ S+
Sbjct: 310 FAPWCPPCMRLLPEYRKAARSFVGKPVGFGTVDCTVHSQLCHQYNIRSYPTTILYNNSQP 369
Query: 433 TPYQGQRTA 459
+ G A
Sbjct: 370 HQFIGHHNA 378
Score = 52.4 bits (120), Expect = 4e-07
Identities = 17/57 (29%), Positives = 35/57 (61%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGS 426
+APWCG C P+Y++ A+ LKG V+ ++ ++ + + + +PT++++ GS
Sbjct: 459 YAPWCGPCMRFAPKYEQLAKMLKGKVRAAKVNCEQDYGLCSEANIHSYPTVRLYLGS 515
Score = 33.5 bits (73), Expect = 0.20
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Frame = +2
Query: 413 YSQGASTHHIKVR-GQQKDXXXXXXXXXXXXHMKSWARNRVGPLLISLMSLL*QTATSKN 589
+ A T I+V QQ+D HM WA N + P ++S ++ SKN
Sbjct: 393 FRSAAFTGDIRVPCAQQEDWVHQGWRDVDSLHM--WAYNYL-PSIVSEVN-------SKN 442
Query: 590 WS*TAMTSG---LVEFYAPWCGHCKNLEPHW 673
+ + S +V+FYAPWCG C P +
Sbjct: 443 FFTDVLASEDAWVVDFYAPWCGPCMRFAPKY 473
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +2
Query: 620 VEFYAPWCGHCKNLEPHWG*XWPPXLKXR*NWVPWDATVHTTXGVTLPVQGYPT 781
V+F+APWC C L P + + + D TVH+ ++ YPT
Sbjct: 307 VDFFAPWCPPCMRLLPEYRKAARSFVGKPVGFGTVDCTVHSQLCHQYNIRSYPT 360
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 52.4 bits (120), Expect = 4e-07
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARALKGIVKVG---ALDADEHRSVSQKYGVTGFPT 405
+APWCGHCK++ PEY AA+ LK G A+DA + ++ +++ V G+PT
Sbjct: 107 YAPWCGHCKAMKPEYVDAAQTLKEQEIPGVLAAVDATKEAALGKRFKVEGYPT 159
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/59 (40%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 611 SGLVEFYAPWCGHCKNLEPHWG*XWPPXLKXR*NWV--PWDATVHTTXGVTLPVQGYPT 781
S LV FYAPWCGHCK ++P + + V DAT G V+GYPT
Sbjct: 101 SVLVMFYAPWCGHCKAMKPEYVDAAQTLKEQEIPGVLAAVDATKEAALGKRFKVEGYPT 159
Score = 38.3 bits (85), Expect = 0.007
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 617 LVEFYAPWCGHCKNLEP 667
LV FYAPWCGHCK +P
Sbjct: 216 LVMFYAPWCGHCKKAKP 232
Score = 35.9 bits (79), Expect = 0.037
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAAR 315
+APWCGHCK PE AA+
Sbjct: 220 YAPWCGHCKKAKPELMSAAK 239
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 47.6 bits (108), Expect = 1e-05
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARALK 324
FAPWCGHCK L PEY+ AA ALK
Sbjct: 38 FAPWCGHCKRLAPEYETAAEALK 60
Score = 41.5 bits (93), Expect = 7e-04
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 617 LVEFYAPWCGHCKNLEPHW 673
LVEF+APWCGHCK L P +
Sbjct: 34 LVEFFAPWCGHCKRLAPEY 52
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 13/85 (15%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARAL----KGIVKVGALDADEH----RSVSQKYGVTGFPTIK 411
+APWC HCK + P+YK A+ L V++ +D + + +KY V PTI
Sbjct: 159 YAPWCFHCKKMAPDYKDVAKELLILSHNSVRLAKVDCSANNMATKKTCKKYNVKFLPTIY 218
Query: 412 IFTGSKHT-PYQG----QRTAEGFV 471
+F K ++G +++ +GFV
Sbjct: 219 LFHDGKFVEEFEGNNRNKKSIKGFV 243
Score = 37.1 bits (82), Expect = 0.016
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 617 LVEFYAPWCGHCKNLEPHW 673
LV+FYAPWC HCK + P +
Sbjct: 155 LVDFYAPWCFHCKKMAPDY 173
Score = 33.9 bits (74), Expect = 0.15
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 617 LVEFYAPWCGHCKNLEP 667
LV+FYAPWC C+ L P
Sbjct: 72 LVDFYAPWCSDCQRLSP 88
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARALK 324
+APWC C+ L P + AA L+
Sbjct: 76 YAPWCSDCQRLSPLFDTAALQLR 98
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +1
Query: 259 APWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF 417
A WCG CKS+ P Y + K V + +D D + ++ K GVT PT + F
Sbjct: 36 ASWCGPCKSIAPVYSGLSEKYKQAVFL-KIDVDVCQELAAKQGVTAMPTFQFF 87
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 36.7 bits (81), Expect = 0.021
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARAL----KGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTG 423
+APWC C +L P+Y+KAAR L K ++ ++ + ++ GV + T+ +T
Sbjct: 47 YAPWCSDCDNLRPKYEKAARDLAKEHKFVMAKALMNTNSTQTTCLPMGVHYWRTLLAYTI 106
Query: 424 SKH 432
H
Sbjct: 107 GVH 109
Score = 35.9 bits (79), Expect = 0.037
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 617 LVEFYAPWCGHCKNLEPHW 673
LV+FYAPWC C NL P +
Sbjct: 43 LVDFYAPWCSDCDNLRPKY 61
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 35.1 bits (77), Expect = 0.065
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 620 VEFYAPWCGHCKNLEPHW 673
V+FYAPWC HC L P W
Sbjct: 111 VKFYAPWCIHCIKLAPIW 128
Score = 31.9 bits (69), Expect = 0.60
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF-TGSKH 432
+APWC HC L P +++ A K +AD ++S+ + G+PT+ +F G +
Sbjct: 114 YAPWCIHCIKLAPIWERLAEDFKD-------NAD--ITISK---INGYPTLMLFKDGVQK 161
Query: 433 TPYQGQR 453
Y G R
Sbjct: 162 KEYSGNR 168
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 35.1 bits (77), Expect = 0.065
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +1
Query: 259 APWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF 417
A WCG CKS+ P + + +V + +D D+ + ++ G+ PT +
Sbjct: 37 ATWCGPCKSIAPVFTNLSMKFMDVVFL-KVDVDQCQLTAESCGIRAMPTFHFY 88
Score = 28.3 bits (60), Expect = 7.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 617 LVEFYAPWCGHCKNLEP 667
+++F A WCG CK++ P
Sbjct: 32 VIDFTATWCGPCKSIAP 48
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 34.7 bits (76), Expect = 0.085
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARALKGI--VKVGALDADEHRSVSQKYGVTGFPTIKIFTGSK 429
+ PWCG C + P AR + I V V +DAD++ + V+ +P+I +F +
Sbjct: 543 YTPWCGMCINFAPVLLAVARFFQDISQVSVTRIDADQN-DLPWNLTVSSYPSIILFPAGR 601
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 617 LVEFYAPWCGHCKNLEP 667
L+ FY PWCG C N P
Sbjct: 539 LLVFYTPWCGMCINFAP 555
>SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)
Length = 664
Score = 33.9 bits (74), Expect = 0.15
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF 417
+APWCG + V E+ AA L G V A++ S +KY + FP ++
Sbjct: 460 YAPWCGQSRRAVEEFNIAASLLYGKVTFIAINC-WAGSCREKYTLDSFPKFFVY 512
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 33.5 bits (73), Expect = 0.20
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 259 APWCGHCKSLVPEYKKAARALKGIVKVGALDAD 357
A WCG C+ + P++++ A+ KG VK +D D
Sbjct: 20 ATWCGPCRMIGPKFEEMAKEFKG-VKCAKVDVD 51
>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 33.5 bits (73), Expect = 0.20
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +1
Query: 259 APWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSK 429
A WC CK L P G V + +D D ++ +GV PT+ G K
Sbjct: 46 ACWCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGK 102
>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 33.1 bits (72), Expect = 0.26
Identities = 16/55 (29%), Positives = 22/55 (40%)
Frame = +1
Query: 265 WCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSK 429
WC CK L P G V + +D D ++ +GV PT+ G K
Sbjct: 2 WCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGK 56
>SB_6800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 31.9 bits (69), Expect = 0.60
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Frame = +1
Query: 7 RVYFTYLSYTL*CAVNLDLNKFYNRLFINSVKFHNVTRIFYRYLALCNGVLGPLRFVF-- 180
RVY+ YLS + + F N I+S + H+ +R++YRYL+ N +L F
Sbjct: 31 RVYYKYLSNRISKFFASSFHTFENLRRISSDR-HSFSRVYYRYLS--NRILKFFASSFHT 87
Query: 181 ----RRYRADTE*FRQISYKFRRN 240
RR +D F ++ YK+ N
Sbjct: 88 FENLRRISSDRHSFSRVYYKYLSN 111
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 31.9 bits (69), Expect = 0.60
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAARALKGIVKVGALDADE 360
+A WCG C+ + P++KK A V +D DE
Sbjct: 38 YAEWCGPCRQIKPKFKKMALEEFKDVFFAKIDVDE 72
Score = 31.1 bits (67), Expect = 1.1
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = +2
Query: 617 LVEFYAPWCGHCKNLEP 667
+++FYA WCG C+ ++P
Sbjct: 34 VIDFYAEWCGPCRQIKP 50
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = +1
Query: 256 FAPWCGHCKSLVPEYKKAAR--ALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSK 429
+APW HC+ ++ + + A A + + VG +A E ++ +Y + +P + F
Sbjct: 51 YAPWDDHCQRILQIFDQVADEFADRDDIVVGKSNAYEDVKIATRYWIDRYPMFRYFIKGS 110
Query: 430 HT--PYQGQRTAEGFV 471
T Y G + F+
Sbjct: 111 TTEETYDGGFKPDDFI 126
>SB_55515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 29.1 bits (62), Expect = 4.2
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +1
Query: 7 RVYFTYLSYTL*CAVNLDLNKFYNRLFINSVKFHNVTRIFYRYLALCNGVLGPLRF---- 174
RVY+ YLS + + F N I+S + H+ +R++Y+YL+ F
Sbjct: 103 RVYYKYLSNRISKFFASSFHTFENLRRISSDR-HSFSRVYYKYLSNRISKFFASSFHTSE 161
Query: 175 VFRRYRADTE*FRQISYKFRRN 240
RR +D F ++ YK+ N
Sbjct: 162 NLRRISSDRHSFSRVYYKYLSN 183
>SB_3993| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 543
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -3
Query: 560 MTSDLSEEDPLDFLPKISYAFSLAA 486
+T D S+E+ +D PKI AFSLA+
Sbjct: 169 LTKDDSDEETVDTFPKIVSAFSLAS 193
>SB_43183| Best HMM Match : MethyltransfD12 (HMM E-Value=2)
Length = 604
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 7 RVYFTYLSYTL*CAVNLDLNKFYNRLFINSVKFHNVTRIFYRYLA 141
RVY+ YLS + + F N I+S + H+ +R++Y+YL+
Sbjct: 168 RVYYKYLSNRISKFFASSFHTFENLRRISSDR-HSFSRVYYKYLS 211
>SB_43128| Best HMM Match : DUF713 (HMM E-Value=6.7)
Length = 251
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 7 RVYFTYLSYTL*CAVNLDLNKFYNRLFINSVKFHNVTRIFYRYLA 141
RVY+ YLS + + F N I+S + H+ +R++Y+YL+
Sbjct: 177 RVYYKYLSNRISKFFASSFHTFENLRRISSDR-HSFSRVYYKYLS 220
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,737,984
Number of Sequences: 59808
Number of extensions: 481112
Number of successful extensions: 961
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2143884611
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -