BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0804 (784 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 86 3e-17 SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14 SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 75 7e-14 SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 72 6e-13 SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 65 7e-11 SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 60 2e-09 SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08 SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08 SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 52 4e-07 SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 48 1e-05 SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 44 1e-04 SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 43 3e-04 SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.021 SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 35 0.065 SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 35 0.065 SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 35 0.085 SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058) 34 0.15 SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 33 0.20 SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20 SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26 SB_6800| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.60 SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.60 SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 31 1.4 SB_55515| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2 SB_3993| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6 SB_43183| Best HMM Match : MethyltransfD12 (HMM E-Value=2) 28 9.8 SB_43128| Best HMM Match : DUF713 (HMM E-Value=6.7) 28 9.8 >SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) Length = 362 Score = 85.8 bits (203), Expect = 3e-17 Identities = 42/77 (54%), Positives = 51/77 (66%), Gaps = 5/77 (6%) Frame = +1 Query: 256 FAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF-TGSKH 432 FAPWCGHC+ L PE+ KAA LKG VKVGALDA H + +Y V G+PTIK+F G K+ Sbjct: 105 FAPWCGHCQRLAPEWAKAATELKGKVKVGALDATVHTVTASRYQVQGYPTIKVFAAGIKN 164 Query: 433 T----PYQGQRTAEGFV 471 + YQG RTA + Sbjct: 165 SHSVEDYQGGRTASDII 181 Score = 60.9 bits (141), Expect = 1e-09 Identities = 29/56 (51%), Positives = 32/56 (57%) Frame = +2 Query: 617 LVEFYAPWCGHCKNLEPHWG*XWPPXLKXR*NWVPWDATVHTTXGVTLPVQGYPTI 784 LVEF+APWCGHC+ L P W LK + DATVHT VQGYPTI Sbjct: 101 LVEFFAPWCGHCQRLAPEWA-KAATELKGKVKVGALDATVHTVTASRYQVQGYPTI 155 Score = 54.0 bits (124), Expect = 1e-07 Identities = 35/99 (35%), Positives = 47/99 (47%), Gaps = 12/99 (12%) Frame = +1 Query: 355 DEHRSVSQKYGVTGFPTIKIFTGSKHTP--YQGQRTAEGFVXXXXXXXXXXXXXIL---- 516 D H+SV Y + GFPTIKIF +K++P Y GQRTA+G V + Sbjct: 2 DVHQSVGGPYNIRGFPTIKIFGANKNSPQDYNGQRTAQGIVDAAMRAAQEAVSQRMSGGG 61 Query: 517 ------XXXXXXXXXXXXXVITLTDSNFKELVLDSDDLW 615 V+ LTD+NF++ VL+S DLW Sbjct: 62 RSSSGGGGRRGGSGGNKEDVVELTDTNFEKEVLNSKDLW 100 Score = 36.7 bits (81), Expect = 0.021 Identities = 13/27 (48%), Positives = 21/27 (77%) Frame = +2 Query: 173 SSSDVIELTPSNFDKLVTNSDEIWIIE 253 + DV+ELT +NF+K V NS ++W++E Sbjct: 77 NKEDVVELTDTNFEKEVLNSKDLWLVE 103 >SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 645 Score = 77.4 bits (182), Expect = 1e-14 Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 3/73 (4%) Frame = +1 Query: 256 FAPWCGHCKSLVPEYKKAARALK---GIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGS 426 FAPWCGHCK L PEY+KAA+ L+ + + +DA ++QKY V G+PT+K+F Sbjct: 201 FAPWCGHCKQLAPEYEKAAQELQKHDPPIPLAIVDATIESELAQKYEVQGYPTLKVFRKG 260 Query: 427 KHTPYQGQRTAEG 465 K T Y+GQR G Sbjct: 261 KATEYKGQRDQYG 273 Score = 72.5 bits (170), Expect = 3e-13 Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 3/75 (4%) Frame = +1 Query: 256 FAPWCGHCKSLVPEYKKAARALK---GIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGS 426 +APWCGHCKSL PEY KAA+ +K V +DA ++Q++ V+G+PT+KIF Sbjct: 86 YAPWCGHCKSLAPEYAKAAKKMKLNDPPVPFAKMDATVASDIAQRFDVSGYPTLKIFRKG 145 Query: 427 KHTPYQGQRTAEGFV 471 Y+G R G V Sbjct: 146 TPYEYEGPREESGIV 160 Score = 50.8 bits (116), Expect = 1e-06 Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%) Frame = +2 Query: 617 LVEFYAPWCGHCKNLEPHWG*XWPPXLKXR*NWVPW---DATVHTTXGVTLPVQGYPTI 784 LVEFYAPWCGHCK+L P + +K VP+ DATV + V GYPT+ Sbjct: 82 LVEFYAPWCGHCKSLAPEYA-KAAKKMKLNDPPVPFAKMDATVASDIAQRFDVSGYPTL 139 Score = 47.6 bits (108), Expect = 1e-05 Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 3/59 (5%) Frame = +2 Query: 617 LVEFYAPWCGHCKNLEPHWG*XWPPXLKXR*NWVPW---DATVHTTXGVTLPVQGYPTI 784 LVEF+APWCGHCK L P + L+ +P DAT+ + VQGYPT+ Sbjct: 197 LVEFFAPWCGHCKQLAPEYE-KAAQELQKHDPPIPLAIVDATIESELAQKYEVQGYPTL 254 Score = 29.5 bits (63), Expect = 3.2 Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Frame = +2 Query: 617 LVEFYAPWCGHCKNLEPHWG*XWPPXLKXR*NWV--PWDATVHTTXGVTLPVQGYPTI 784 L+EFYAPWCG LEP + + N V DAT + T V+G+PTI Sbjct: 547 LIEFYAPWCGIA--LEPTFK-KLGKHFRNDKNIVIAKIDATANDVPS-TYAVEGFPTI 600 >SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) Length = 536 Score = 74.9 bits (176), Expect = 7e-14 Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 3/75 (4%) Frame = +1 Query: 256 FAPWCGHCKSLVPEYKKAARAL---KGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGS 426 +APWCGHCK+L PEY KAA L K +K+ +DA + +K+ V G+PTIK F Sbjct: 49 YAPWCGHCKALAPEYAKAAGQLKSEKSEIKLAKVDATAETKLGEKFQVQGYPTIKFFKDG 108 Query: 427 KHTPYQGQRTAEGFV 471 K + Y G RTA V Sbjct: 109 KPSEYAGGRTAPEIV 123 Score = 52.8 bits (121), Expect = 3e-07 Identities = 29/59 (49%), Positives = 32/59 (54%), Gaps = 3/59 (5%) Frame = +2 Query: 617 LVEFYAPWCGHCKNLEPHWG*XWPPXLKXR*NWVPW---DATVHTTXGVTLPVQGYPTI 784 LVEFYAPWCGHCK L P + LK + + DAT T G VQGYPTI Sbjct: 45 LVEFYAPWCGHCKALAPEYA-KAAGQLKSEKSEIKLAKVDATAETKLGEKFQVQGYPTI 102 Score = 49.6 bits (113), Expect = 3e-06 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 1/89 (1%) Frame = +1 Query: 208 FRQISYKFRRNLDH*VFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYG 387 F +++ +N+ +APWCGHCK L P + + K + D + + Sbjct: 394 FDEVARNKDKNVFVEFYAPWCGHCKQLAPIWDQLGEKYKDHADIVVAKMDSTANEVEGVK 453 Query: 388 VTGFPTIKIF-TGSKHTPYQGQRTAEGFV 471 V FPTIK F + Y G RT + FV Sbjct: 454 VHSFPTIKYFPKEGEAVDYNGGRTLDDFV 482 Score = 44.0 bits (99), Expect = 1e-04 Identities = 15/18 (83%), Positives = 15/18 (83%) Frame = +2 Query: 620 VEFYAPWCGHCKNLEPHW 673 VEFYAPWCGHCK L P W Sbjct: 407 VEFYAPWCGHCKQLAPIW 424 >SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) Length = 1056 Score = 71.7 bits (168), Expect = 6e-13 Identities = 36/77 (46%), Positives = 45/77 (58%), Gaps = 5/77 (6%) Frame = +1 Query: 256 FAPWCGHCKSLVPEYKKAARALK---GIVKVGALDADE-HRSVSQKYGVTGFPTIKIF-T 420 FAPWCGHCK L PEY+ AA ALK V + +D E + KYGV+G+PT+KIF Sbjct: 563 FAPWCGHCKRLAPEYETAAEALKKNDPPVPLAKVDCTEAGKDTCSKYGVSGYPTLKIFRN 622 Query: 421 GSKHTPYQGQRTAEGFV 471 G Y G R + G + Sbjct: 623 GEMSKDYDGPRDSSGII 639 Score = 45.2 bits (102), Expect = 6e-05 Identities = 15/19 (78%), Positives = 18/19 (94%) Frame = +2 Query: 617 LVEFYAPWCGHCKNLEPHW 673 L+EFYAPWCGHCK+LEP + Sbjct: 884 LIEFYAPWCGHCKSLEPKY 902 Score = 41.5 bits (93), Expect = 7e-04 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = +2 Query: 617 LVEFYAPWCGHCKNLEPHW 673 LVEF+APWCGHCK L P + Sbjct: 559 LVEFFAPWCGHCKRLAPEY 577 Score = 41.5 bits (93), Expect = 7e-04 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Frame = +1 Query: 256 FAPWCGHCKSLVPEYKKAARALKGI--VKVGALDADEHRSVSQKYGVTGFPTIKI 414 +APWCGHCKSL P+Y + L+ + + + +DA + + V G I I Sbjct: 888 YAPWCGHCKSLEPKYNELGEKLQDVKDIVIAKMDATAN-DAPPNFSVQGIIIISI 941 >SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) Length = 295 Score = 64.9 bits (151), Expect = 7e-11 Identities = 31/76 (40%), Positives = 40/76 (52%), Gaps = 4/76 (5%) Frame = +1 Query: 256 FAPWCGHCKSLVPEYKKAARAL--KGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSK 429 +APWCGHCK L P Y++ A V + +DAD R + ++ V GFPTIK F Sbjct: 47 YAPWCGHCKQLAPTYEQLGEAYTQSSDVIIAKVDADGDRDLGSRFDVKGFPTIKYFPKGS 106 Query: 430 HTP--YQGQRTAEGFV 471 TP Y G R F+ Sbjct: 107 TTPEEYNGGRDINDFI 122 Score = 42.3 bits (95), Expect = 4e-04 Identities = 15/17 (88%), Positives = 15/17 (88%) Frame = +2 Query: 617 LVEFYAPWCGHCKNLEP 667 LVEFYAPWCGHCK L P Sbjct: 43 LVEFYAPWCGHCKQLAP 59 >SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) Length = 271 Score = 60.5 bits (140), Expect = 2e-09 Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%) Frame = +1 Query: 256 FAPWCGHCKSLVPEYKKAARAL---KGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGS 426 FAPWCGHC + P Y KAA+ L + A+D +H+ V++K + G+PT+K++ S Sbjct: 75 FAPWCGHCNEMKPNYYKAAQVLHDEDANCNLAAVDCTKHKDVAKKVALAGYPTVKLYKAS 134 Score = 55.6 bits (128), Expect = 4e-08 Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 3/75 (4%) Frame = +1 Query: 256 FAPWCGHCKSLVPEYKKAARALKGIVK--VGALDADEHRSVSQKYGVTGFPTIKIFTGSK 429 +APWCGHCK+ P+Y+KAA K LD + V K V G+PT++ + K Sbjct: 172 YAPWCGHCKNAKPKYEKAAETFKDQPNRVFAKLDCTKFGDVCDKEEVNGYPTLRYYLYGK 231 Query: 430 H-TPYQGQRTAEGFV 471 Y G R E + Sbjct: 232 FVVEYDGDRVTEDLI 246 Score = 41.1 bits (92), Expect = 0.001 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = +2 Query: 617 LVEFYAPWCGHCKNLEPHW 673 LV FYAPWCGHCKN +P + Sbjct: 168 LVMFYAPWCGHCKNAKPKY 186 Score = 37.1 bits (82), Expect = 0.016 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Frame = +2 Query: 617 LVEFYAPWCGHCKNLEPHW--G*XWPPXLKXR*NWVPWDATVHTTXGVTLPVQGYPTI 784 LV ++APWCGHC ++P++ N D T H + + GYPT+ Sbjct: 71 LVMYFAPWCGHCNEMKPNYYKAAQVLHDEDANCNLAAVDCTKHKDVAKKVALAGYPTV 128 >SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 564 Score = 56.8 bits (131), Expect = 2e-08 Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 5/77 (6%) Frame = +1 Query: 256 FAPWCGHCKSLVPEYKKAARAL--KGIVKVGALDADEHRS--VSQKYGVTGFPTIKIFTG 423 +APWC HC+ L+P+ + AA AL KG+ + +D + RS + + + G+P++K+F Sbjct: 45 YAPWCHHCQELLPQLEGAANALAAKGLFQFAKVDCTDPRSKVLCDNFKIEGYPSVKLFKF 104 Query: 424 SKHT-PYQGQRTAEGFV 471 K+ Y GQRT V Sbjct: 105 GKYAGDYIGQRTDAALV 121 Score = 35.5 bits (78), Expect = 0.049 Identities = 12/17 (70%), Positives = 14/17 (82%) Frame = +2 Query: 617 LVEFYAPWCGHCKNLEP 667 LV+FYAPWC HC+ L P Sbjct: 41 LVDFYAPWCHHCQELLP 57 >SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 711 Score = 56.0 bits (129), Expect = 3e-08 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 1/69 (1%) Frame = +1 Query: 256 FAPWCGHCKSLVPEYKKAARALKG-IVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSKH 432 FAPWC C L+PEY+KAAR+ G V G +D H + +Y + +PT ++ S+ Sbjct: 310 FAPWCPPCMRLLPEYRKAARSFVGKPVGFGTVDCTVHSQLCHQYNIRSYPTTILYNNSQP 369 Query: 433 TPYQGQRTA 459 + G A Sbjct: 370 HQFIGHHNA 378 Score = 52.4 bits (120), Expect = 4e-07 Identities = 17/57 (29%), Positives = 35/57 (61%) Frame = +1 Query: 256 FAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGS 426 +APWCG C P+Y++ A+ LKG V+ ++ ++ + + + +PT++++ GS Sbjct: 459 YAPWCGPCMRFAPKYEQLAKMLKGKVRAAKVNCEQDYGLCSEANIHSYPTVRLYLGS 515 Score = 33.5 bits (73), Expect = 0.20 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 4/91 (4%) Frame = +2 Query: 413 YSQGASTHHIKVR-GQQKDXXXXXXXXXXXXHMKSWARNRVGPLLISLMSLL*QTATSKN 589 + A T I+V QQ+D HM WA N + P ++S ++ SKN Sbjct: 393 FRSAAFTGDIRVPCAQQEDWVHQGWRDVDSLHM--WAYNYL-PSIVSEVN-------SKN 442 Query: 590 WS*TAMTSG---LVEFYAPWCGHCKNLEPHW 673 + + S +V+FYAPWCG C P + Sbjct: 443 FFTDVLASEDAWVVDFYAPWCGPCMRFAPKY 473 Score = 31.1 bits (67), Expect = 1.1 Identities = 16/54 (29%), Positives = 24/54 (44%) Frame = +2 Query: 620 VEFYAPWCGHCKNLEPHWG*XWPPXLKXR*NWVPWDATVHTTXGVTLPVQGYPT 781 V+F+APWC C L P + + + D TVH+ ++ YPT Sbjct: 307 VDFFAPWCPPCMRLLPEYRKAARSFVGKPVGFGTVDCTVHSQLCHQYNIRSYPT 360 >SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) Length = 386 Score = 52.4 bits (120), Expect = 4e-07 Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 3/53 (5%) Frame = +1 Query: 256 FAPWCGHCKSLVPEYKKAARALKGIVKVG---ALDADEHRSVSQKYGVTGFPT 405 +APWCGHCK++ PEY AA+ LK G A+DA + ++ +++ V G+PT Sbjct: 107 YAPWCGHCKAMKPEYVDAAQTLKEQEIPGVLAAVDATKEAALGKRFKVEGYPT 159 Score = 43.2 bits (97), Expect = 2e-04 Identities = 24/59 (40%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Frame = +2 Query: 611 SGLVEFYAPWCGHCKNLEPHWG*XWPPXLKXR*NWV--PWDATVHTTXGVTLPVQGYPT 781 S LV FYAPWCGHCK ++P + + V DAT G V+GYPT Sbjct: 101 SVLVMFYAPWCGHCKAMKPEYVDAAQTLKEQEIPGVLAAVDATKEAALGKRFKVEGYPT 159 Score = 38.3 bits (85), Expect = 0.007 Identities = 13/17 (76%), Positives = 14/17 (82%) Frame = +2 Query: 617 LVEFYAPWCGHCKNLEP 667 LV FYAPWCGHCK +P Sbjct: 216 LVMFYAPWCGHCKKAKP 232 Score = 35.9 bits (79), Expect = 0.037 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = +1 Query: 256 FAPWCGHCKSLVPEYKKAAR 315 +APWCGHCK PE AA+ Sbjct: 220 YAPWCGHCKKAKPELMSAAK 239 >SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) Length = 70 Score = 47.6 bits (108), Expect = 1e-05 Identities = 18/23 (78%), Positives = 19/23 (82%) Frame = +1 Query: 256 FAPWCGHCKSLVPEYKKAARALK 324 FAPWCGHCK L PEY+ AA ALK Sbjct: 38 FAPWCGHCKRLAPEYETAAEALK 60 Score = 41.5 bits (93), Expect = 7e-04 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = +2 Query: 617 LVEFYAPWCGHCKNLEPHW 673 LVEF+APWCGHCK L P + Sbjct: 34 LVEFFAPWCGHCKRLAPEY 52 >SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) Length = 472 Score = 44.0 bits (99), Expect = 1e-04 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 13/85 (15%) Frame = +1 Query: 256 FAPWCGHCKSLVPEYKKAARAL----KGIVKVGALDADEH----RSVSQKYGVTGFPTIK 411 +APWC HCK + P+YK A+ L V++ +D + + +KY V PTI Sbjct: 159 YAPWCFHCKKMAPDYKDVAKELLILSHNSVRLAKVDCSANNMATKKTCKKYNVKFLPTIY 218 Query: 412 IFTGSKHT-PYQG----QRTAEGFV 471 +F K ++G +++ +GFV Sbjct: 219 LFHDGKFVEEFEGNNRNKKSIKGFV 243 Score = 37.1 bits (82), Expect = 0.016 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = +2 Query: 617 LVEFYAPWCGHCKNLEPHW 673 LV+FYAPWC HCK + P + Sbjct: 155 LVDFYAPWCFHCKKMAPDY 173 Score = 33.9 bits (74), Expect = 0.15 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = +2 Query: 617 LVEFYAPWCGHCKNLEP 667 LV+FYAPWC C+ L P Sbjct: 72 LVDFYAPWCSDCQRLSP 88 Score = 28.3 bits (60), Expect = 7.4 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = +1 Query: 256 FAPWCGHCKSLVPEYKKAARALK 324 +APWC C+ L P + AA L+ Sbjct: 76 YAPWCSDCQRLSPLFDTAALQLR 98 >SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) Length = 308 Score = 42.7 bits (96), Expect = 3e-04 Identities = 20/53 (37%), Positives = 28/53 (52%) Frame = +1 Query: 259 APWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF 417 A WCG CKS+ P Y + K V + +D D + ++ K GVT PT + F Sbjct: 36 ASWCGPCKSIAPVYSGLSEKYKQAVFL-KIDVDVCQELAAKQGVTAMPTFQFF 87 >SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 488 Score = 36.7 bits (81), Expect = 0.021 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 4/63 (6%) Frame = +1 Query: 256 FAPWCGHCKSLVPEYKKAARAL----KGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTG 423 +APWC C +L P+Y+KAAR L K ++ ++ + ++ GV + T+ +T Sbjct: 47 YAPWCSDCDNLRPKYEKAARDLAKEHKFVMAKALMNTNSTQTTCLPMGVHYWRTLLAYTI 106 Query: 424 SKH 432 H Sbjct: 107 GVH 109 Score = 35.9 bits (79), Expect = 0.037 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = +2 Query: 617 LVEFYAPWCGHCKNLEPHW 673 LV+FYAPWC C NL P + Sbjct: 43 LVDFYAPWCSDCDNLRPKY 61 >SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) Length = 186 Score = 35.1 bits (77), Expect = 0.065 Identities = 12/18 (66%), Positives = 13/18 (72%) Frame = +2 Query: 620 VEFYAPWCGHCKNLEPHW 673 V+FYAPWC HC L P W Sbjct: 111 VKFYAPWCIHCIKLAPIW 128 Score = 31.9 bits (69), Expect = 0.60 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Frame = +1 Query: 256 FAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF-TGSKH 432 +APWC HC L P +++ A K +AD ++S+ + G+PT+ +F G + Sbjct: 114 YAPWCIHCIKLAPIWERLAEDFKD-------NAD--ITISK---INGYPTLMLFKDGVQK 161 Query: 433 TPYQGQR 453 Y G R Sbjct: 162 KEYSGNR 168 >SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) Length = 456 Score = 35.1 bits (77), Expect = 0.065 Identities = 14/53 (26%), Positives = 26/53 (49%) Frame = +1 Query: 259 APWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF 417 A WCG CKS+ P + + +V + +D D+ + ++ G+ PT + Sbjct: 37 ATWCGPCKSIAPVFTNLSMKFMDVVFL-KVDVDQCQLTAESCGIRAMPTFHFY 88 Score = 28.3 bits (60), Expect = 7.4 Identities = 8/17 (47%), Positives = 13/17 (76%) Frame = +2 Query: 617 LVEFYAPWCGHCKNLEP 667 +++F A WCG CK++ P Sbjct: 32 VIDFTATWCGPCKSIAP 48 >SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) Length = 975 Score = 34.7 bits (76), Expect = 0.085 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Frame = +1 Query: 256 FAPWCGHCKSLVPEYKKAARALKGI--VKVGALDADEHRSVSQKYGVTGFPTIKIFTGSK 429 + PWCG C + P AR + I V V +DAD++ + V+ +P+I +F + Sbjct: 543 YTPWCGMCINFAPVLLAVARFFQDISQVSVTRIDADQN-DLPWNLTVSSYPSIILFPAGR 601 Score = 30.3 bits (65), Expect = 1.8 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = +2 Query: 617 LVEFYAPWCGHCKNLEP 667 L+ FY PWCG C N P Sbjct: 539 LLVFYTPWCGMCINFAP 555 >SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058) Length = 664 Score = 33.9 bits (74), Expect = 0.15 Identities = 18/54 (33%), Positives = 27/54 (50%) Frame = +1 Query: 256 FAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF 417 +APWCG + V E+ AA L G V A++ S +KY + FP ++ Sbjct: 460 YAPWCGQSRRAVEEFNIAASLLYGKVTFIAINC-WAGSCREKYTLDSFPKFFVY 512 >SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) Length = 438 Score = 33.5 bits (73), Expect = 0.20 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = +1 Query: 259 APWCGHCKSLVPEYKKAARALKGIVKVGALDAD 357 A WCG C+ + P++++ A+ KG VK +D D Sbjct: 20 ATWCGPCRMIGPKFEEMAKEFKG-VKCAKVDVD 51 >SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 111 Score = 33.5 bits (73), Expect = 0.20 Identities = 17/57 (29%), Positives = 23/57 (40%) Frame = +1 Query: 259 APWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSK 429 A WC CK L P G V + +D D ++ +GV PT+ G K Sbjct: 46 ACWCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGK 102 >SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 80 Score = 33.1 bits (72), Expect = 0.26 Identities = 16/55 (29%), Positives = 22/55 (40%) Frame = +1 Query: 265 WCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSK 429 WC CK L P G V + +D D ++ +GV PT+ G K Sbjct: 2 WCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGK 56 >SB_6800| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 141 Score = 31.9 bits (69), Expect = 0.60 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Frame = +1 Query: 7 RVYFTYLSYTL*CAVNLDLNKFYNRLFINSVKFHNVTRIFYRYLALCNGVLGPLRFVF-- 180 RVY+ YLS + + F N I+S + H+ +R++YRYL+ N +L F Sbjct: 31 RVYYKYLSNRISKFFASSFHTFENLRRISSDR-HSFSRVYYRYLS--NRILKFFASSFHT 87 Query: 181 ----RRYRADTE*FRQISYKFRRN 240 RR +D F ++ YK+ N Sbjct: 88 FENLRRISSDRHSFSRVYYKYLSN 111 >SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 94 Score = 31.9 bits (69), Expect = 0.60 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +1 Query: 256 FAPWCGHCKSLVPEYKKAARALKGIVKVGALDADE 360 +A WCG C+ + P++KK A V +D DE Sbjct: 38 YAEWCGPCRQIKPKFKKMALEEFKDVFFAKIDVDE 72 Score = 31.1 bits (67), Expect = 1.1 Identities = 8/17 (47%), Positives = 14/17 (82%) Frame = +2 Query: 617 LVEFYAPWCGHCKNLEP 667 +++FYA WCG C+ ++P Sbjct: 34 VIDFYAEWCGPCRQIKP 50 >SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) Length = 335 Score = 30.7 bits (66), Expect = 1.4 Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 4/76 (5%) Frame = +1 Query: 256 FAPWCGHCKSLVPEYKKAAR--ALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSK 429 +APW HC+ ++ + + A A + + VG +A E ++ +Y + +P + F Sbjct: 51 YAPWDDHCQRILQIFDQVADEFADRDDIVVGKSNAYEDVKIATRYWIDRYPMFRYFIKGS 110 Query: 430 HT--PYQGQRTAEGFV 471 T Y G + F+ Sbjct: 111 TTEETYDGGFKPDDFI 126 >SB_55515| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 215 Score = 29.1 bits (62), Expect = 4.2 Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Frame = +1 Query: 7 RVYFTYLSYTL*CAVNLDLNKFYNRLFINSVKFHNVTRIFYRYLALCNGVLGPLRF---- 174 RVY+ YLS + + F N I+S + H+ +R++Y+YL+ F Sbjct: 103 RVYYKYLSNRISKFFASSFHTFENLRRISSDR-HSFSRVYYKYLSNRISKFFASSFHTSE 161 Query: 175 VFRRYRADTE*FRQISYKFRRN 240 RR +D F ++ YK+ N Sbjct: 162 NLRRISSDRHSFSRVYYKYLSN 183 >SB_3993| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 543 Score = 28.7 bits (61), Expect = 5.6 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = -3 Query: 560 MTSDLSEEDPLDFLPKISYAFSLAA 486 +T D S+E+ +D PKI AFSLA+ Sbjct: 169 LTKDDSDEETVDTFPKIVSAFSLAS 193 >SB_43183| Best HMM Match : MethyltransfD12 (HMM E-Value=2) Length = 604 Score = 27.9 bits (59), Expect = 9.8 Identities = 15/45 (33%), Positives = 26/45 (57%) Frame = +1 Query: 7 RVYFTYLSYTL*CAVNLDLNKFYNRLFINSVKFHNVTRIFYRYLA 141 RVY+ YLS + + F N I+S + H+ +R++Y+YL+ Sbjct: 168 RVYYKYLSNRISKFFASSFHTFENLRRISSDR-HSFSRVYYKYLS 211 >SB_43128| Best HMM Match : DUF713 (HMM E-Value=6.7) Length = 251 Score = 27.9 bits (59), Expect = 9.8 Identities = 15/45 (33%), Positives = 26/45 (57%) Frame = +1 Query: 7 RVYFTYLSYTL*CAVNLDLNKFYNRLFINSVKFHNVTRIFYRYLA 141 RVY+ YLS + + F N I+S + H+ +R++Y+YL+ Sbjct: 177 RVYYKYLSNRISKFFASSFHTFENLRRISSDR-HSFSRVYYKYLS 220 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 23,737,984 Number of Sequences: 59808 Number of extensions: 481112 Number of successful extensions: 961 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 845 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 943 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2143884611 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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