SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0803
         (751 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VAX7 Cluster: CG4869-PA; n=8; Eukaryota|Rep: CG4869-P...    62   1e-08
UniRef50_P52275 Cluster: Tubulin beta-2 chain; n=115; Bilateria|...    62   1e-08
UniRef50_P04350 Cluster: Tubulin beta-4 chain; n=4602; root|Rep:...    61   2e-08
UniRef50_UPI00003ABCC4 Cluster: UPI00003ABCC4 related cluster; n...    60   8e-08
UniRef50_A7TZ32 Cluster: Beta-tubulin; n=1; Lepeophtheirus salmo...    56   9e-07
UniRef50_UPI00005A581E Cluster: PREDICTED: similar to tubulin, b...    51   4e-05
UniRef50_A4D1N8 Cluster: Similar to beta-tubulin; n=2; Homo/Pan/...    50   5e-05
UniRef50_Q4P3J3 Cluster: Putative uncharacterized protein; n=1; ...    50   6e-05
UniRef50_Q3SD83 Cluster: Beta tubulin,putative; n=1; Paramecium ...    48   2e-04
UniRef50_Q3SEG3 Cluster: Beta tubulin,putative; n=2; Paramecium ...    44   0.003
UniRef50_Q2U1M2 Cluster: Beta tubulin; n=649; root|Rep: Beta tub...    43   0.007
UniRef50_UPI0000D9DAEA Cluster: PREDICTED: similar to tubulin, b...    43   0.009
UniRef50_Q24HJ8 Cluster: Tubulin/FtsZ family, GTPase domain cont...    41   0.037
UniRef50_UPI00005639CD Cluster: UPI00005639CD related cluster; n...    38   0.20 
UniRef50_Q26236 Cluster: Beta-tubulin; n=5; Eukaryota|Rep: Beta-...    38   0.20 
UniRef50_A7P7V1 Cluster: Chromosome chr3 scaffold_8, whole genom...    38   0.26 
UniRef50_Q24D62 Cluster: Tubulin/FtsZ family, GTPase domain cont...    38   0.35 
UniRef50_Q227Z6 Cluster: Tubulin/FtsZ family, GTPase domain cont...    37   0.46 
UniRef50_A0DI61 Cluster: Chromosome undetermined scaffold_51, wh...    36   1.4  
UniRef50_Q22UN3 Cluster: Tubulin/FtsZ family, GTPase domain cont...    33   5.7  
UniRef50_UPI00015B51AF Cluster: PREDICTED: similar to sodium/pot...    33   9.9  
UniRef50_Q3SEG7 Cluster: Theta tubuline, putative; n=1; Parameci...    33   9.9  

>UniRef50_Q9VAX7 Cluster: CG4869-PA; n=8; Eukaryota|Rep: CG4869-PA -
           Drosophila melanogaster (Fruit fly)
          Length = 522

 Score = 62.1 bits (144), Expect = 1e-08
 Identities = 31/44 (70%), Positives = 33/44 (75%)
 Frame = -3

Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
           AMFR + FL        MDEMEFTEAESNMNDL+SEYQQYQE T
Sbjct: 452 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLISEYQQYQEAT 494


>UniRef50_P52275 Cluster: Tubulin beta-2 chain; n=115;
           Bilateria|Rep: Tubulin beta-2 chain - Caenorhabditis
           elegans
          Length = 450

 Score = 62.1 bits (144), Expect = 1e-08
 Identities = 31/44 (70%), Positives = 33/44 (75%)
 Frame = -3

Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
           AMFR + FL        MDEMEFTEAESNMNDL+SEYQQYQE T
Sbjct: 387 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLISEYQQYQEAT 429


>UniRef50_P04350 Cluster: Tubulin beta-4 chain; n=4602; root|Rep:
           Tubulin beta-4 chain - Homo sapiens (Human)
          Length = 444

 Score = 61.3 bits (142), Expect = 2e-08
 Identities = 31/44 (70%), Positives = 33/44 (75%)
 Frame = -3

Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
           AMFR + FL        MDEMEFTEAESNMNDLVSEYQQYQ+ T
Sbjct: 387 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVSEYQQYQDAT 429


>UniRef50_UPI00003ABCC4 Cluster: UPI00003ABCC4 related cluster; n=1;
           Gallus gallus|Rep: UPI00003ABCC4 UniRef100 entry -
           Gallus gallus
          Length = 177

 Score = 59.7 bits (138), Expect = 8e-08
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = +1

Query: 562 VGSWYCWYSETRSFMLLSASVNSISSM 642
           V SWYCWYSETRSFMLLSASVNSISSM
Sbjct: 89  VASWYCWYSETRSFMLLSASVNSISSM 115


>UniRef50_A7TZ32 Cluster: Beta-tubulin; n=1; Lepeophtheirus
           salmonis|Rep: Beta-tubulin - Lepeophtheirus salmonis
           (salmon louse)
          Length = 84

 Score = 56.0 bits (129), Expect = 9e-07
 Identities = 25/25 (100%), Positives = 25/25 (100%)
 Frame = -3

Query: 641 MDEMEFTEAESNMNDLVSEYQQYQE 567
           MDEMEFTEAESNMNDLVSEYQQYQE
Sbjct: 42  MDEMEFTEAESNMNDLVSEYQQYQE 66


>UniRef50_UPI00005A581E Cluster: PREDICTED: similar to tubulin, beta
           3; n=2; Canis lupus familiaris|Rep: PREDICTED: similar
           to tubulin, beta 3 - Canis familiaris
          Length = 363

 Score = 50.8 bits (116), Expect = 4e-05
 Identities = 27/44 (61%), Positives = 29/44 (65%)
 Frame = -3

Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
           AMF+ + FL        MDE EFTEAESN NDLV EYQQYQ  T
Sbjct: 302 AMFQRKTFLHWYM-GEGMDETEFTEAESNTNDLVPEYQQYQNAT 344


>UniRef50_A4D1N8 Cluster: Similar to beta-tubulin; n=2;
           Homo/Pan/Gorilla group|Rep: Similar to beta-tubulin -
           Homo sapiens (Human)
          Length = 98

 Score = 50.4 bits (115), Expect = 5e-05
 Identities = 26/42 (61%), Positives = 29/42 (69%)
 Frame = -3

Query: 686 FRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
           F+ QG  ALV     MDEMEFTEA+ NMNDLV  YQQY + T
Sbjct: 43  FQTQGLPALVH--EGMDEMEFTEAKCNMNDLVFAYQQYHDAT 82


>UniRef50_Q4P3J3 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 291

 Score = 50.0 bits (114), Expect = 6e-05
 Identities = 24/40 (60%), Positives = 29/40 (72%)
 Frame = -3

Query: 689 MFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQ 570
           MFR + FL        MDEMEFTEAESN+ DL++EYQQY+
Sbjct: 204 MFRRKAFLHWYT-GEGMDEMEFTEAESNLMDLIAEYQQYE 242


>UniRef50_Q3SD83 Cluster: Beta tubulin,putative; n=1; Paramecium
           tetraurelia|Rep: Beta tubulin,putative - Paramecium
           tetraurelia
          Length = 430

 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 20/23 (86%), Positives = 21/23 (91%)
 Frame = -3

Query: 641 MDEMEFTEAESNMNDLVSEYQQY 573
           MDEMEFTEAESNMND +SEYQ Y
Sbjct: 388 MDEMEFTEAESNMNDFISEYQDY 410


>UniRef50_Q3SEG3 Cluster: Beta tubulin,putative; n=2; Paramecium
           tetraurelia|Rep: Beta tubulin,putative - Paramecium
           tetraurelia
          Length = 426

 Score = 44.4 bits (100), Expect = 0.003
 Identities = 22/36 (61%), Positives = 26/36 (72%)
 Frame = -3

Query: 689 MFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEY 582
           MFR + F+        MDEMEFTEAESN+NDL+SEY
Sbjct: 371 MFRRKAFVYTYQNI-GMDEMEFTEAESNINDLISEY 405


>UniRef50_Q2U1M2 Cluster: Beta tubulin; n=649; root|Rep: Beta
           tubulin - Aspergillus oryzae
          Length = 817

 Score = 43.2 bits (97), Expect = 0.007
 Identities = 16/25 (64%), Positives = 23/25 (92%)
 Frame = -3

Query: 641 MDEMEFTEAESNMNDLVSEYQQYQE 567
           +DEM+F EAESNMNDL+ EY+++Q+
Sbjct: 790 VDEMDFVEAESNMNDLIEEYREHQD 814


>UniRef50_UPI0000D9DAEA Cluster: PREDICTED: similar to tubulin, beta
           8; n=1; Macaca mulatta|Rep: PREDICTED: similar to
           tubulin, beta 8 - Macaca mulatta
          Length = 293

 Score = 42.7 bits (96), Expect = 0.009
 Identities = 23/42 (54%), Positives = 27/42 (64%)
 Frame = -3

Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQE 567
           AMFR + F         MDEME TEA +NM DL+SE QQYQ+
Sbjct: 60  AMFRCKAFSHWYM-GEGMDEMELTEAVTNMKDLMSESQQYQD 100


>UniRef50_Q24HJ8 Cluster: Tubulin/FtsZ family, GTPase domain
           containing protein; n=2; Tetrahymena thermophila
           SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
           protein - Tetrahymena thermophila SB210
          Length = 447

 Score = 40.7 bits (91), Expect = 0.037
 Identities = 16/21 (76%), Positives = 20/21 (95%)
 Frame = -3

Query: 641 MDEMEFTEAESNMNDLVSEYQ 579
           MDEMEFTEAESN+ND++ +YQ
Sbjct: 401 MDEMEFTEAESNINDVICDYQ 421


>UniRef50_UPI00005639CD Cluster: UPI00005639CD related cluster; n=1;
           Mus musculus|Rep: UPI00005639CD UniRef100 entry - Mus
           musculus
          Length = 377

 Score = 38.3 bits (85), Expect = 0.20
 Identities = 22/38 (57%), Positives = 26/38 (68%)
 Frame = -3

Query: 689 MFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQ 576
           MFR + FL        MD+MEF EAESN+N LVSEYQ+
Sbjct: 342 MFRCKAFLHWYT-GEGMDQMEFMEAESNIN-LVSEYQR 377


>UniRef50_Q26236 Cluster: Beta-tubulin; n=5; Eukaryota|Rep:
           Beta-tubulin - Reticulomyxa filosa
          Length = 473

 Score = 38.3 bits (85), Expect = 0.20
 Identities = 18/41 (43%), Positives = 26/41 (63%)
 Frame = -3

Query: 689 MFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQE 567
           M++ + FL        MDEMEF E++ N+ DLV+EYQ  Q+
Sbjct: 395 MYKRKAFLHWYK-GEGMDEMEFEESDKNVRDLVTEYQDKQD 434


>UniRef50_A7P7V1 Cluster: Chromosome chr3 scaffold_8, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr3 scaffold_8, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 176

 Score = 37.9 bits (84), Expect = 0.26
 Identities = 21/38 (55%), Positives = 23/38 (60%)
 Frame = -3

Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQ 579
           A FR   FL       +MD+MEFTE ESNMN  VSE Q
Sbjct: 140 ATFRRNAFLHWCT-RESMDKMEFTETESNMNGFVSENQ 176


>UniRef50_Q24D62 Cluster: Tubulin/FtsZ family, GTPase domain
           containing protein; n=1; Tetrahymena thermophila
           SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
           protein - Tetrahymena thermophila SB210
          Length = 459

 Score = 37.5 bits (83), Expect = 0.35
 Identities = 15/24 (62%), Positives = 20/24 (83%)
 Frame = -3

Query: 638 DEMEFTEAESNMNDLVSEYQQYQE 567
           DEMEFTEA+S +ND++  Y Q+QE
Sbjct: 400 DEMEFTEAQSYLNDILDLYNQHQE 423


>UniRef50_Q227Z6 Cluster: Tubulin/FtsZ family, GTPase domain
           containing protein; n=1; Tetrahymena thermophila
           SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
           protein - Tetrahymena thermophila SB210
          Length = 436

 Score = 37.1 bits (82), Expect = 0.46
 Identities = 15/24 (62%), Positives = 20/24 (83%)
 Frame = -3

Query: 647 RAMDEMEFTEAESNMNDLVSEYQQ 576
           + M+E+EF EA SN+ DL+SEYQQ
Sbjct: 380 KGMEEIEFKEAHSNVMDLISEYQQ 403


>UniRef50_A0DI61 Cluster: Chromosome undetermined scaffold_51, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_51,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 614

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 14/24 (58%), Positives = 20/24 (83%)
 Frame = -3

Query: 641 MDEMEFTEAESNMNDLVSEYQQYQ 570
           MDE +F+EAESNMN+LV  Y+ ++
Sbjct: 28  MDETKFSEAESNMNNLVLSYENFK 51


>UniRef50_Q22UN3 Cluster: Tubulin/FtsZ family, GTPase domain
           containing protein; n=1; Tetrahymena thermophila
           SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
           protein - Tetrahymena thermophila SB210
          Length = 431

 Score = 33.5 bits (73), Expect = 5.7
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = -3

Query: 641 MDEMEFTEAESNMNDLVSEYQ 579
           MDEMEF EA+ N  DL++EYQ
Sbjct: 400 MDEMEFQEAKYNTADLITEYQ 420


>UniRef50_UPI00015B51AF Cluster: PREDICTED: similar to
           sodium/potassium-dependent atpase beta-2 subunit; n=1;
           Nasonia vitripennis|Rep: PREDICTED: similar to
           sodium/potassium-dependent atpase beta-2 subunit -
           Nasonia vitripennis
          Length = 327

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 18/65 (27%), Positives = 30/65 (46%)
 Frame = -2

Query: 258 LTKIDTFYLHNMCNRNKMADQNSIPTNADSTRTPVPFYFCCTECIKFGCCHERQTFNCDG 79
           + ++D F L N  N++K+ +        D  R P P   C  +   +G C   Q++   G
Sbjct: 129 VNRLDMF-LENYLNKSKLPESGRNQVICDYDRPPAPGKVCAVDINSWGPCSAEQSY---G 184

Query: 78  FSNRS 64
           F+N S
Sbjct: 185 FNNSS 189


>UniRef50_Q3SEG7 Cluster: Theta tubuline, putative; n=1; Paramecium
           tetraurelia|Rep: Theta tubuline, putative - Paramecium
           tetraurelia
          Length = 417

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = -3

Query: 638 DEMEFTEAESNMNDLVSEYQQY 573
           DE++F EAES+++DL SEY  Y
Sbjct: 385 DELDFVEAESSVSDLFSEYISY 406


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,829,403
Number of Sequences: 1657284
Number of extensions: 11688742
Number of successful extensions: 27829
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 27004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27809
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -