Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0803
         (751 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    25   0.85 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.5  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   4.6  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   8.0  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 595 RSFMLLSASVNSISSMALAGGTNAR 669
           RSF L SAS N + +  +AGG   R
Sbjct: 269 RSFTLASASNNKLGAPIVAGGDAGR 293


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -2

Query: 219  NRNKMADQNSIPTNADSTRTPV-PFYFCCTECI 124
            N +  A+ N+IPTNA +T   +  F + C + +
Sbjct: 1015 NSSVNANTNNIPTNAGTTPGAILAFSWACNDAV 1047



 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +2

Query: 527 PALRQTLRPRRRWAPGTVGTPRQG 598
           P  +Q    R +W  G  G+P +G
Sbjct: 2   PRRKQDCPKRMKWEGGEEGSPEEG 25


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 521 PAPALRQTLRPRRRWAPGTVGTPRQG 598
           P+  LRQ + P     P + G P QG
Sbjct: 52  PSVGLRQGIPPHHYGGPPSGGQPPQG 77


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 5/19 (26%), Positives = 10/19 (52%)
 Frame = +3

Query: 633 LVHGPRRWYQCKKALRPEH 689
           ++H P  W++ +    P H
Sbjct: 89  MIHRPNWWHELETKFNPHH 107


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,084
Number of Sequences: 336
Number of extensions: 3369
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)