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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0803
         (751 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611...    61   8e-10
03_01_0034 + 318432-318825,318902-319851                               61   8e-10
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635...    61   8e-10
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349     61   8e-10
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505...    60   1e-09
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379     60   2e-09
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998     60   2e-09
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467           60   2e-09
03_06_0519 - 34481751-34482722                                         29   3.0  
06_03_0640 - 23059473-23060489,23060592-23060651,23063163-230632...    28   9.1  

>05_04_0306 +
           20058640-20059159,20060406-20060819,20060921-20061190,
           20062179-20062849
          Length = 624

 Score = 61.3 bits (142), Expect = 8e-10
 Identities = 31/44 (70%), Positives = 33/44 (75%)
 Frame = -3

Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
           AMFR + FL        MDEMEFTEAESNMNDLVSEYQQYQ+ T
Sbjct: 567 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVSEYQQYQDAT 609


>03_01_0034 + 318432-318825,318902-319851
          Length = 447

 Score = 61.3 bits (142), Expect = 8e-10
 Identities = 31/44 (70%), Positives = 33/44 (75%)
 Frame = -3

Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
           AMFR + FL        MDEMEFTEAESNMNDLVSEYQQYQ+ T
Sbjct: 387 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVSEYQQYQDAT 429


>01_06_1060 +
           34162161-34162554,34162613-34162675,34163262-34163531,
           34163944-34164623
          Length = 468

 Score = 61.3 bits (142), Expect = 8e-10
 Identities = 31/44 (70%), Positives = 33/44 (75%)
 Frame = -3

Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
           AMFR + FL        MDEMEFTEAESNMNDLVSEYQQYQ+ T
Sbjct: 408 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVSEYQQYQDAT 450


>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
          Length = 447

 Score = 61.3 bits (142), Expect = 8e-10
 Identities = 31/44 (70%), Positives = 33/44 (75%)
 Frame = -3

Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
           AMFR + FL        MDEMEFTEAESNMNDLVSEYQQYQ+ T
Sbjct: 387 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVSEYQQYQDAT 429


>03_05_0575 +
           25747813-25748206,25748567-25748614,25750296-25750565,
           25750658-25751334
          Length = 462

 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 30/44 (68%), Positives = 34/44 (77%)
 Frame = -3

Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
           AMFR + FL     +  MDEMEFTEAESNMNDLV+EYQQYQ+ T
Sbjct: 403 AMFRRKAFLHWYT-SEGMDEMEFTEAESNMNDLVAEYQQYQDAT 445


>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
          Length = 446

 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 30/44 (68%), Positives = 33/44 (75%)
 Frame = -3

Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
           AMFR + FL        MDEMEFTEAESNMNDLV+EYQQYQ+ T
Sbjct: 387 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVAEYQQYQDAT 429


>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
          Length = 444

 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 30/44 (68%), Positives = 33/44 (75%)
 Frame = -3

Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
           AMFR + FL        MDEMEFTEAESNMNDLV+EYQQYQ+ T
Sbjct: 387 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVAEYQQYQDAT 429


>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
          Length = 447

 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 30/44 (68%), Positives = 33/44 (75%)
 Frame = -3

Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
           AMFR + FL        MDEMEFTEAESNMNDLV+EYQQYQ+ T
Sbjct: 387 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVAEYQQYQDAT 429


>03_06_0519 - 34481751-34482722
          Length = 323

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -3

Query: 743 PPAIPGXVTSASRNSSPAMFRPQGFLALVPP 651
           PPA PG   +A  +SSP   R    LA  PP
Sbjct: 77  PPATPGAAAAAPTSSSPTAARRSNRLAGAPP 107


>06_03_0640 -
           23059473-23060489,23060592-23060651,23063163-23063283,
           23063476-23065496
          Length = 1072

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 746 TPPAIPGXVTSASRNSSPAMFRPQGFLALVP 654
           TPP +PG +T  ++   PA+F    + A VP
Sbjct: 15  TPPTLPGAITHTTQVGYPAVFYNGNWGAQVP 45


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,467,755
Number of Sequences: 37544
Number of extensions: 323173
Number of successful extensions: 807
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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