Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0803
(751 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 61 8e-10
03_01_0034 + 318432-318825,318902-319851 61 8e-10
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 61 8e-10
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 61 8e-10
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 60 1e-09
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 60 2e-09
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 60 2e-09
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 60 2e-09
03_06_0519 - 34481751-34482722 29 3.0
06_03_0640 - 23059473-23060489,23060592-23060651,23063163-230632... 28 9.1
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 61.3 bits (142), Expect = 8e-10
Identities = 31/44 (70%), Positives = 33/44 (75%)
Frame = -3
Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
AMFR + FL MDEMEFTEAESNMNDLVSEYQQYQ+ T
Sbjct: 567 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVSEYQQYQDAT 609
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 61.3 bits (142), Expect = 8e-10
Identities = 31/44 (70%), Positives = 33/44 (75%)
Frame = -3
Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
AMFR + FL MDEMEFTEAESNMNDLVSEYQQYQ+ T
Sbjct: 387 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVSEYQQYQDAT 429
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 61.3 bits (142), Expect = 8e-10
Identities = 31/44 (70%), Positives = 33/44 (75%)
Frame = -3
Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
AMFR + FL MDEMEFTEAESNMNDLVSEYQQYQ+ T
Sbjct: 408 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVSEYQQYQDAT 450
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 61.3 bits (142), Expect = 8e-10
Identities = 31/44 (70%), Positives = 33/44 (75%)
Frame = -3
Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
AMFR + FL MDEMEFTEAESNMNDLVSEYQQYQ+ T
Sbjct: 387 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVSEYQQYQDAT 429
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/44 (68%), Positives = 34/44 (77%)
Frame = -3
Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
AMFR + FL + MDEMEFTEAESNMNDLV+EYQQYQ+ T
Sbjct: 403 AMFRRKAFLHWYT-SEGMDEMEFTEAESNMNDLVAEYQQYQDAT 445
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 60.1 bits (139), Expect = 2e-09
Identities = 30/44 (68%), Positives = 33/44 (75%)
Frame = -3
Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
AMFR + FL MDEMEFTEAESNMNDLV+EYQQYQ+ T
Sbjct: 387 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVAEYQQYQDAT 429
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 60.1 bits (139), Expect = 2e-09
Identities = 30/44 (68%), Positives = 33/44 (75%)
Frame = -3
Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
AMFR + FL MDEMEFTEAESNMNDLV+EYQQYQ+ T
Sbjct: 387 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVAEYQQYQDAT 429
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 60.1 bits (139), Expect = 2e-09
Identities = 30/44 (68%), Positives = 33/44 (75%)
Frame = -3
Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
AMFR + FL MDEMEFTEAESNMNDLV+EYQQYQ+ T
Sbjct: 387 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVAEYQQYQDAT 429
>03_06_0519 - 34481751-34482722
Length = 323
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -3
Query: 743 PPAIPGXVTSASRNSSPAMFRPQGFLALVPP 651
PPA PG +A +SSP R LA PP
Sbjct: 77 PPATPGAAAAAPTSSSPTAARRSNRLAGAPP 107
>06_03_0640 -
23059473-23060489,23060592-23060651,23063163-23063283,
23063476-23065496
Length = 1072
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 746 TPPAIPGXVTSASRNSSPAMFRPQGFLALVP 654
TPP +PG +T ++ PA+F + A VP
Sbjct: 15 TPPTLPGAITHTTQVGYPAVFYNGNWGAQVP 45
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,467,755
Number of Sequences: 37544
Number of extensions: 323173
Number of successful extensions: 807
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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