Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0803
(751 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X16826-1|CAA34726.1| 435|Drosophila melanogaster 60C beta tubul... 62 6e-10
M22335-1|AAA28993.1| 454|Drosophila melanogaster protein ( D.me... 62 6e-10
M20420-1|AAA28991.1| 446|Drosophila melanogaster protein ( D.me... 62 6e-10
M20419-1|AAA28989.1| 447|Drosophila melanogaster protein ( D.me... 62 6e-10
BT015991-1|AAV36876.1| 454|Drosophila melanogaster RE53159p pro... 62 6e-10
BT003242-1|AAO24999.1| 447|Drosophila melanogaster LD43681p pro... 62 6e-10
AY118725-1|AAM50585.1| 446|Drosophila melanogaster GH02051p pro... 62 6e-10
AE014297-930|AAF54373.1| 446|Drosophila melanogaster CG9359-PA ... 62 6e-10
AE013599-3851|AAF47193.2| 454|Drosophila melanogaster CG3401-PA... 62 6e-10
AE013599-2894|AAN16132.2| 375|Drosophila melanogaster CG9277-PD... 62 6e-10
AE013599-2893|AAN16133.1| 375|Drosophila melanogaster CG9277-PC... 62 6e-10
AE013599-2892|AAF57556.1| 456|Drosophila melanogaster CG9277-PA... 62 6e-10
AE013599-2891|AAF57555.1| 447|Drosophila melanogaster CG9277-PB... 62 6e-10
AY118611-1|AAM49980.1| 457|Drosophila melanogaster LP10436p pro... 62 8e-10
AE014297-4213|AAF56770.2| 522|Drosophila melanogaster CG4869-PA... 62 8e-10
AJ252203-1|CAB64656.1| 219|Drosophila melanogaster putative COQ... 29 8.9
AJ252202-1|CAB64655.1| 219|Drosophila melanogaster putative COQ... 29 8.9
AE014298-949|AAF46199.2| 219|Drosophila melanogaster CG14437-PA... 29 8.9
>X16826-1|CAA34726.1| 435|Drosophila melanogaster 60C beta tubulin
protein.
Length = 435
Score = 62.5 bits (145), Expect = 6e-10
Identities = 32/44 (72%), Positives = 33/44 (75%)
Frame = -3
Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
AMFR + FL MDEMEFTEAESNMNDLVSEYQQYQE T
Sbjct: 374 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVSEYQQYQEAT 416
>M22335-1|AAA28993.1| 454|Drosophila melanogaster protein (
D.melanogaster beta-3 tubulin gene, exons 2, 3 and 4. ).
Length = 454
Score = 62.5 bits (145), Expect = 6e-10
Identities = 32/44 (72%), Positives = 33/44 (75%)
Frame = -3
Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
AMFR + FL MDEMEFTEAESNMNDLVSEYQQYQE T
Sbjct: 393 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVSEYQQYQEAT 435
>M20420-1|AAA28991.1| 446|Drosophila melanogaster protein (
D.melanogaster beta-2 tubulin mRNA, complete cds. ).
Length = 446
Score = 62.5 bits (145), Expect = 6e-10
Identities = 32/44 (72%), Positives = 33/44 (75%)
Frame = -3
Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
AMFR + FL MDEMEFTEAESNMNDLVSEYQQYQE T
Sbjct: 387 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVSEYQQYQEAT 429
>M20419-1|AAA28989.1| 447|Drosophila melanogaster protein (
D.melanogaster beta-1 tubulin mRNA, complete cds. ).
Length = 447
Score = 62.5 bits (145), Expect = 6e-10
Identities = 32/44 (72%), Positives = 33/44 (75%)
Frame = -3
Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
AMFR + FL MDEMEFTEAESNMNDLVSEYQQYQE T
Sbjct: 387 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVSEYQQYQEAT 429
>BT015991-1|AAV36876.1| 454|Drosophila melanogaster RE53159p
protein.
Length = 454
Score = 62.5 bits (145), Expect = 6e-10
Identities = 32/44 (72%), Positives = 33/44 (75%)
Frame = -3
Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
AMFR + FL MDEMEFTEAESNMNDLVSEYQQYQE T
Sbjct: 393 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVSEYQQYQEAT 435
>BT003242-1|AAO24999.1| 447|Drosophila melanogaster LD43681p
protein.
Length = 447
Score = 62.5 bits (145), Expect = 6e-10
Identities = 32/44 (72%), Positives = 33/44 (75%)
Frame = -3
Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
AMFR + FL MDEMEFTEAESNMNDLVSEYQQYQE T
Sbjct: 387 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVSEYQQYQEAT 429
>AY118725-1|AAM50585.1| 446|Drosophila melanogaster GH02051p
protein.
Length = 446
Score = 62.5 bits (145), Expect = 6e-10
Identities = 32/44 (72%), Positives = 33/44 (75%)
Frame = -3
Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
AMFR + FL MDEMEFTEAESNMNDLVSEYQQYQE T
Sbjct: 387 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVSEYQQYQEAT 429
>AE014297-930|AAF54373.1| 446|Drosophila melanogaster CG9359-PA
protein.
Length = 446
Score = 62.5 bits (145), Expect = 6e-10
Identities = 32/44 (72%), Positives = 33/44 (75%)
Frame = -3
Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
AMFR + FL MDEMEFTEAESNMNDLVSEYQQYQE T
Sbjct: 387 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVSEYQQYQEAT 429
>AE013599-3851|AAF47193.2| 454|Drosophila melanogaster CG3401-PA
protein.
Length = 454
Score = 62.5 bits (145), Expect = 6e-10
Identities = 32/44 (72%), Positives = 33/44 (75%)
Frame = -3
Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
AMFR + FL MDEMEFTEAESNMNDLVSEYQQYQE T
Sbjct: 393 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVSEYQQYQEAT 435
>AE013599-2894|AAN16132.2| 375|Drosophila melanogaster CG9277-PD,
isoform D protein.
Length = 375
Score = 62.5 bits (145), Expect = 6e-10
Identities = 32/44 (72%), Positives = 33/44 (75%)
Frame = -3
Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
AMFR + FL MDEMEFTEAESNMNDLVSEYQQYQE T
Sbjct: 315 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVSEYQQYQEAT 357
>AE013599-2893|AAN16133.1| 375|Drosophila melanogaster CG9277-PC,
isoform C protein.
Length = 375
Score = 62.5 bits (145), Expect = 6e-10
Identities = 32/44 (72%), Positives = 33/44 (75%)
Frame = -3
Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
AMFR + FL MDEMEFTEAESNMNDLVSEYQQYQE T
Sbjct: 315 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVSEYQQYQEAT 357
>AE013599-2892|AAF57556.1| 456|Drosophila melanogaster CG9277-PA,
isoform A protein.
Length = 456
Score = 62.5 bits (145), Expect = 6e-10
Identities = 32/44 (72%), Positives = 33/44 (75%)
Frame = -3
Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
AMFR + FL MDEMEFTEAESNMNDLVSEYQQYQE T
Sbjct: 396 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVSEYQQYQEAT 438
>AE013599-2891|AAF57555.1| 447|Drosophila melanogaster CG9277-PB,
isoform B protein.
Length = 447
Score = 62.5 bits (145), Expect = 6e-10
Identities = 32/44 (72%), Positives = 33/44 (75%)
Frame = -3
Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
AMFR + FL MDEMEFTEAESNMNDLVSEYQQYQE T
Sbjct: 387 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVSEYQQYQEAT 429
>AY118611-1|AAM49980.1| 457|Drosophila melanogaster LP10436p
protein.
Length = 457
Score = 62.1 bits (144), Expect = 8e-10
Identities = 31/44 (70%), Positives = 33/44 (75%)
Frame = -3
Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
AMFR + FL MDEMEFTEAESNMNDL+SEYQQYQE T
Sbjct: 387 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLISEYQQYQEAT 429
>AE014297-4213|AAF56770.2| 522|Drosophila melanogaster CG4869-PA
protein.
Length = 522
Score = 62.1 bits (144), Expect = 8e-10
Identities = 31/44 (70%), Positives = 33/44 (75%)
Frame = -3
Query: 692 AMFRPQGFLALVPPARAMDEMEFTEAESNMNDLVSEYQQYQEPT 561
AMFR + FL MDEMEFTEAESNMNDL+SEYQQYQE T
Sbjct: 452 AMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLISEYQQYQEAT 494
>AJ252203-1|CAB64656.1| 219|Drosophila melanogaster putative COQ7
isologue protein.
Length = 219
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 201 DQNSIPTNADSTRTPVPFYFCCTECIKFGC 112
+Q T D PFY TE IKFGC
Sbjct: 180 EQEHHDTGIDHGAEQAPFYQAMTEVIKFGC 209
>AJ252202-1|CAB64655.1| 219|Drosophila melanogaster putative COQ7
isologue protein.
Length = 219
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 201 DQNSIPTNADSTRTPVPFYFCCTECIKFGC 112
+Q T D PFY TE IKFGC
Sbjct: 180 EQEHHDTGIDHGAEQAPFYQAMTEVIKFGC 209
>AE014298-949|AAF46199.2| 219|Drosophila melanogaster CG14437-PA
protein.
Length = 219
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 201 DQNSIPTNADSTRTPVPFYFCCTECIKFGC 112
+Q T D PFY TE IKFGC
Sbjct: 180 EQEHHDTGIDHGAEQAPFYQAMTEVIKFGC 209
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,293,594
Number of Sequences: 53049
Number of extensions: 565098
Number of successful extensions: 1646
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1629
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -