BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0802 (745 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC070277-1|AAH70277.1| 93|Homo sapiens HIG1 domain family, mem... 48 5e-05 BC009594-1|AAH09594.1| 93|Homo sapiens HIG1 domain family, mem... 48 5e-05 BC009583-1|AAH09583.1| 93|Homo sapiens HIG1 domain family, mem... 48 5e-05 BC000601-1|AAH00601.1| 93|Homo sapiens HIG1 domain family, mem... 48 5e-05 AF145385-1|AAD33954.1| 93|Homo sapiens hypoxia-inducbile gene ... 48 5e-05 CR457385-1|CAG33666.1| 93|Homo sapiens HIG1 protein. 47 8e-05 BC020667-1|AAH20667.1| 99|Homo sapiens HIG1 domain family, mem... 38 0.029 AB038022-1|BAA90726.1| 99|Homo sapiens CLST 11240 protein prot... 38 0.029 AB038021-1|BAA90725.1| 99|Homo sapiens CLST 11240 protein prot... 38 0.029 AF026247-2|AAC52078.1| 75|Homo sapiens HERV-E envelope glycopr... 31 4.4 AF026246-2|AAC52076.1| 75|Homo sapiens HERV-E envelope glycopr... 31 4.4 >BC070277-1|AAH70277.1| 93|Homo sapiens HIG1 domain family, member 1A protein. Length = 93 Score = 47.6 bits (108), Expect = 5e-05 Identities = 24/64 (37%), Positives = 33/64 (51%) Frame = +1 Query: 256 FMVIGITGLXXXXXXXXXXXNXRGAMSTSVFLMQFRVIAQGTVVGALTAGMMYTLYKNHF 435 F+ +GI G RG S+ L+ RV AQG VVGA+T GM Y++Y+ + Sbjct: 29 FVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQGFVVGAMTVGMGYSMYREFW 88 Query: 436 NKLK 447 K K Sbjct: 89 AKPK 92 >BC009594-1|AAH09594.1| 93|Homo sapiens HIG1 domain family, member 1A protein. Length = 93 Score = 47.6 bits (108), Expect = 5e-05 Identities = 24/64 (37%), Positives = 33/64 (51%) Frame = +1 Query: 256 FMVIGITGLXXXXXXXXXXXNXRGAMSTSVFLMQFRVIAQGTVVGALTAGMMYTLYKNHF 435 F+ +GI G RG S+ L+ RV AQG VVGA+T GM Y++Y+ + Sbjct: 29 FVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQGFVVGAMTVGMGYSMYREFW 88 Query: 436 NKLK 447 K K Sbjct: 89 AKPK 92 >BC009583-1|AAH09583.1| 93|Homo sapiens HIG1 domain family, member 1A protein. Length = 93 Score = 47.6 bits (108), Expect = 5e-05 Identities = 24/64 (37%), Positives = 33/64 (51%) Frame = +1 Query: 256 FMVIGITGLXXXXXXXXXXXNXRGAMSTSVFLMQFRVIAQGTVVGALTAGMMYTLYKNHF 435 F+ +GI G RG S+ L+ RV AQG VVGA+T GM Y++Y+ + Sbjct: 29 FVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQGFVVGAMTVGMGYSMYREFW 88 Query: 436 NKLK 447 K K Sbjct: 89 AKPK 92 >BC000601-1|AAH00601.1| 93|Homo sapiens HIG1 domain family, member 1A protein. Length = 93 Score = 47.6 bits (108), Expect = 5e-05 Identities = 24/64 (37%), Positives = 33/64 (51%) Frame = +1 Query: 256 FMVIGITGLXXXXXXXXXXXNXRGAMSTSVFLMQFRVIAQGTVVGALTAGMMYTLYKNHF 435 F+ +GI G RG S+ L+ RV AQG VVGA+T GM Y++Y+ + Sbjct: 29 FVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQGFVVGAMTVGMGYSMYREFW 88 Query: 436 NKLK 447 K K Sbjct: 89 AKPK 92 >AF145385-1|AAD33954.1| 93|Homo sapiens hypoxia-inducbile gene 1 protein. Length = 93 Score = 47.6 bits (108), Expect = 5e-05 Identities = 24/64 (37%), Positives = 33/64 (51%) Frame = +1 Query: 256 FMVIGITGLXXXXXXXXXXXNXRGAMSTSVFLMQFRVIAQGTVVGALTAGMMYTLYKNHF 435 F+ +GI G RG S+ L+ RV AQG VVGA+T GM Y++Y+ + Sbjct: 29 FVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQGFVVGAMTVGMGYSMYREFW 88 Query: 436 NKLK 447 K K Sbjct: 89 AKPK 92 >CR457385-1|CAG33666.1| 93|Homo sapiens HIG1 protein. Length = 93 Score = 46.8 bits (106), Expect = 8e-05 Identities = 23/62 (37%), Positives = 32/62 (51%) Frame = +1 Query: 256 FMVIGITGLXXXXXXXXXXXNXRGAMSTSVFLMQFRVIAQGTVVGALTAGMMYTLYKNHF 435 F+ +GI G RG S+ L+ RV AQG VVGA+T GM Y++Y+ + Sbjct: 29 FVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQGFVVGAMTVGMGYSMYREFW 88 Query: 436 NK 441 K Sbjct: 89 AK 90 >BC020667-1|AAH20667.1| 99|Homo sapiens HIG1 domain family, member 1B protein. Length = 99 Score = 38.3 bits (85), Expect = 0.029 Identities = 18/60 (30%), Positives = 29/60 (48%) Frame = +1 Query: 265 IGITGLXXXXXXXXXXXNXRGAMSTSVFLMQFRVIAQGTVVGALTAGMMYTLYKNHFNKL 444 IG+ G RG+ S+ L+ RV AQ VGA+ G +YT+Y ++ ++ Sbjct: 33 IGLGGCLVVAAYRIYRLRSRGSTKMSIHLIHTRVAAQACAVGAIMLGAVYTMYSDYVKRM 92 >AB038022-1|BAA90726.1| 99|Homo sapiens CLST 11240 protein protein. Length = 99 Score = 38.3 bits (85), Expect = 0.029 Identities = 18/60 (30%), Positives = 29/60 (48%) Frame = +1 Query: 265 IGITGLXXXXXXXXXXXNXRGAMSTSVFLMQFRVIAQGTVVGALTAGMMYTLYKNHFNKL 444 IG+ G RG+ S+ L+ RV AQ VGA+ G +YT+Y ++ ++ Sbjct: 33 IGLGGCLVVAAYRIYRLRSRGSTKMSIHLIHTRVAAQACAVGAIMLGAVYTMYNDYVKRM 92 >AB038021-1|BAA90725.1| 99|Homo sapiens CLST 11240 protein protein. Length = 99 Score = 38.3 bits (85), Expect = 0.029 Identities = 18/60 (30%), Positives = 29/60 (48%) Frame = +1 Query: 265 IGITGLXXXXXXXXXXXNXRGAMSTSVFLMQFRVIAQGTVVGALTAGMMYTLYKNHFNKL 444 IG+ G RG+ S+ L+ RV AQ VGA+ G +YT+Y ++ ++ Sbjct: 33 IGLGGCLVVAAYRIYRLRSRGSTKMSIHLIHTRVAAQACAVGAIMLGAVYTMYSDYVKRM 92 >AF026247-2|AAC52078.1| 75|Homo sapiens HERV-E envelope glycoprotein protein. Length = 75 Score = 31.1 bits (67), Expect = 4.4 Identities = 17/57 (29%), Positives = 27/57 (47%) Frame = +3 Query: 21 TSTSQQCIADITNIGYRL*NLLSCCRSVFHSVPCAFPLKGDCYYQGTIRQEKCHKRN 191 T QCI +T +G ++ + +F+S C LK C Y T + + C +RN Sbjct: 22 TGDCSQCIHQVTEVGQQIKTIF-----LFYSYECMGTLKETCLYNAT-QYKVCSRRN 72 >AF026246-2|AAC52076.1| 75|Homo sapiens HERV-E envelope glycoprotein protein. Length = 75 Score = 31.1 bits (67), Expect = 4.4 Identities = 17/57 (29%), Positives = 27/57 (47%) Frame = +3 Query: 21 TSTSQQCIADITNIGYRL*NLLSCCRSVFHSVPCAFPLKGDCYYQGTIRQEKCHKRN 191 T QCI +T +G ++ + +F+S C LK C Y T + + C +RN Sbjct: 22 TGDCSQCIHQVTEVGQQIKTIF-----LFYSYECMGTLKETCLYNAT-QYKVCSRRN 72 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 85,568,496 Number of Sequences: 237096 Number of extensions: 1508976 Number of successful extensions: 2343 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 2253 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2343 length of database: 76,859,062 effective HSP length: 88 effective length of database: 55,994,614 effective search space used: 8903143626 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -