Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0802
         (745 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   7.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   7.0  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    21   9.2  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 212 LHDNRKSVSLVTFFLSYRALVIAVSLQWKST 120
           LH N    S+ +F      + ++ SLQW ST
Sbjct: 470 LH-NSSPFSIYSFLERLNLIFMSSSLQWSST 499


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 212 LHDNRKSVSLVTFFLSYRALVIAVSLQWKST 120
           LH N    S+ +F      + ++ SLQW ST
Sbjct: 508 LH-NSSPFSIYSFLERLNLIFMSSSLQWSST 537


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 381 CSRCTYCGHDVHSLQKPLQQ 440
           C+ CTY     HSL+  L++
Sbjct: 47  CANCTYATKYCHSLKLHLRK 66


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,108
Number of Sequences: 438
Number of extensions: 3206
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)