Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0801
(477 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 95 9e-19
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 76 5e-13
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 76 5e-13
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 69 7e-11
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 68 1e-10
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 68 1e-10
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 67 2e-10
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 66 3e-10
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 66 5e-10
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 65 7e-10
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 65 9e-10
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 65 9e-10
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 64 1e-09
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 64 2e-09
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 64 2e-09
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 64 2e-09
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 64 2e-09
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 63 4e-09
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 63 4e-09
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 62 5e-09
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 62 6e-09
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 62 6e-09
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 62 6e-09
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 62 8e-09
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 59 6e-08
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 57 2e-07
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 57 2e-07
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 57 2e-07
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 57 2e-07
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 56 3e-07
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 56 4e-07
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 54 1e-06
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 54 1e-06
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 52 5e-06
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 50 3e-05
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 47 2e-04
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 47 2e-04
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 44 0.001
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 44 0.002
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 43 0.003
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 43 0.004
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 39 0.050
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 38 0.11
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 37 0.20
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 37 0.20
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 37 0.20
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 37 0.27
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 36 0.46
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 35 0.81
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 35 0.81
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 34 1.4
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 33 2.5
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 33 3.3
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 33 4.3
UniRef50_Q8ID15 Cluster: Putative uncharacterized protein MAL13P... 32 5.7
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 32 7.5
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 94.7 bits (225), Expect = 9e-19
Identities = 47/76 (61%), Positives = 54/76 (71%)
Frame = -1
Query: 477 LIIVVXKLIAPIIDEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINN 298
LI VV K AP I+E PAKC+EKI STD P CAI SGG TVHPVP P STI L +
Sbjct: 65 LITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSK 124
Query: 297 IREGGRSQNLILFILG 250
++EGG +QNL+LFI G
Sbjct: 125 VKEGGSNQNLMLFIRG 140
Score = 62.1 bits (144), Expect = 6e-09
Identities = 36/73 (49%), Positives = 41/73 (56%)
Frame = -3
Query: 295 KGGG*ESKSYIIYSGNAIXGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 116
K GG + GNA+ GAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 115 PINDPGXPNSARI 77
PI PG PNSARI
Sbjct: 185 PIKLPGCPNSARI 197
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 75.8 bits (178), Expect = 5e-13
Identities = 38/58 (65%), Positives = 40/58 (68%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHL
Sbjct: 92 PRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHL 149
Score = 72.9 bits (171), Expect = 3e-12
Identities = 41/73 (56%), Positives = 43/73 (58%)
Frame = +3
Query: 78 IRAELGXPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAFPE 257
IRAELG PGSLIGDDQIYNTIVTAHA N LVPL+LGAP +AFP
Sbjct: 34 IRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPR 93
Query: 258 *II*DFDSYPPPL 296
F PP L
Sbjct: 94 MNNMSFWLLPPSL 106
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 75.8 bits (178), Expect = 5e-13
Identities = 38/58 (65%), Positives = 40/58 (68%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHL
Sbjct: 68 PRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHL 125
Score = 70.9 bits (166), Expect = 1e-11
Identities = 39/73 (53%), Positives = 42/73 (57%)
Frame = +3
Query: 78 IRAELGXPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAFPE 257
IR ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAP +AFP
Sbjct: 10 IRTELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPR 69
Query: 258 *II*DFDSYPPPL 296
F PP L
Sbjct: 70 MNNMSFWLLPPSL 82
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 68.5 bits (160), Expect = 7e-11
Identities = 34/58 (58%), Positives = 37/58 (63%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PR+NN+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHL
Sbjct: 78 PRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHL 135
Score = 64.5 bits (150), Expect = 1e-09
Identities = 35/73 (47%), Positives = 40/73 (54%)
Frame = +3
Query: 78 IRAELGXPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAFPE 257
IR ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAP +AFP
Sbjct: 20 IRVELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPR 79
Query: 258 *II*DFDSYPPPL 296
F PP L
Sbjct: 80 LNNMSFWFLPPSL 92
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 67.7 bits (158), Expect = 1e-10
Identities = 35/58 (60%), Positives = 38/58 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHL 153
Score = 40.3 bits (90), Expect = 0.022
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 78 IRAELGXPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAF 251
IR EL PGS L G+ Q++N +V HA N L+PL++GA AF
Sbjct: 36 IRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAF 95
Query: 252 P 254
P
Sbjct: 96 P 96
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 67.7 bits (158), Expect = 1e-10
Identities = 35/58 (60%), Positives = 38/58 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHL 153
Score = 40.3 bits (90), Expect = 0.022
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 78 IRAELGXPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAF 251
IR EL PGS L G+ Q++N +V HA N L+PL++GA AF
Sbjct: 36 IRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAF 95
Query: 252 P 254
P
Sbjct: 96 P 96
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 67.3 bits (157), Expect = 2e-10
Identities = 33/59 (55%), Positives = 38/59 (64%)
Frame = +3
Query: 78 IRAELGXPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAFP 254
IRAELG PG+L+GDDQIYN IVTAHA N LVPL++GAP +AFP
Sbjct: 38 IRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFP 96
Score = 67.3 bits (157), Expect = 2e-10
Identities = 34/58 (58%), Positives = 38/58 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHL
Sbjct: 96 PRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHL 153
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 66.5 bits (155), Expect = 3e-10
Identities = 35/58 (60%), Positives = 38/58 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PRIN+I F +VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL
Sbjct: 96 PRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHL 153
Score = 39.1 bits (87), Expect = 0.050
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +3
Query: 78 IRAELGXPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAF 251
IR EL PGS L G+ Q++N +V HA N ++PL++GA ++F
Sbjct: 36 IRMELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSF 95
Query: 252 P 254
P
Sbjct: 96 P 96
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 65.7 bits (153), Expect = 5e-10
Identities = 33/58 (56%), Positives = 37/58 (63%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PR+NNI F +VE GAGTG TVYPPL+S AH G SVD+AIFSLHL
Sbjct: 96 PRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHL 153
Score = 60.9 bits (141), Expect = 1e-08
Identities = 32/74 (43%), Positives = 39/74 (52%)
Frame = +3
Query: 78 IRAELGXPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAFPE 257
IR EL PGS++GDD +YN IVTAHA N VPL++GAP +AFP
Sbjct: 38 IRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIGAPDMAFPR 97
Query: 258 *II*DFDSYPPPLY 299
F PP L+
Sbjct: 98 LNNISFWLLPPALF 111
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 65.3 bits (152), Expect = 7e-10
Identities = 33/58 (56%), Positives = 38/58 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PRINNI F +VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+
Sbjct: 96 PRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHM 153
Score = 38.3 bits (85), Expect = 0.087
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 78 IRAELGXPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAF 251
IR EL PG L G++Q++N +V HA N ++PL++GA AF
Sbjct: 36 IRLELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMIGATDTAF 95
Query: 252 P 254
P
Sbjct: 96 P 96
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 64.9 bits (151), Expect = 9e-10
Identities = 32/59 (54%), Positives = 37/59 (62%)
Frame = +3
Query: 78 IRAELGXPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAFP 254
IRAEL PG+L+GDDQIYN IVTAHA N LVPL++GAP +AFP
Sbjct: 37 IRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPLMIGAPDMAFP 95
Score = 64.5 bits (150), Expect = 1e-09
Identities = 32/58 (55%), Positives = 36/58 (62%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHL
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHL 152
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 64.9 bits (151), Expect = 9e-10
Identities = 32/59 (54%), Positives = 37/59 (62%)
Frame = +3
Query: 78 IRAELGXPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAFP 254
IRAEL PG+L+GDDQIYN IVTAHA N LVPL++GAP +AFP
Sbjct: 37 IRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFP 95
Score = 64.5 bits (150), Expect = 1e-09
Identities = 32/58 (55%), Positives = 36/58 (62%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHL
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHL 152
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 64.5 bits (150), Expect = 1e-09
Identities = 31/59 (52%), Positives = 37/59 (62%)
Frame = +3
Query: 78 IRAELGXPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAFP 254
IRAEL PG+L+GDDQIYN IVTAHA N L+PL++GAP +AFP
Sbjct: 26 IRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFP 84
Score = 64.1 bits (149), Expect = 2e-09
Identities = 31/58 (53%), Positives = 36/58 (62%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PR+NN+ F +E GAGTG TVYPPL+ N+AH G SVDL IFSLHL
Sbjct: 84 PRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHL 141
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 64.1 bits (149), Expect = 2e-09
Identities = 35/73 (47%), Positives = 41/73 (56%)
Frame = +3
Query: 78 IRAELGXPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAFPE 257
IRAELG PG+L+G+D IYN IVTAHA N LVPL++GAP +AFP
Sbjct: 37 IRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPR 96
Query: 258 *II*DFDSYPPPL 296
F PP L
Sbjct: 97 MNNMSFWLLPPSL 109
Score = 63.7 bits (148), Expect = 2e-09
Identities = 31/58 (53%), Positives = 36/58 (62%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PR+NN+ F +VE GAGTG TVYPPL+ N +H G SVDL IFSLHL
Sbjct: 95 PRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHL 152
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 64.1 bits (149), Expect = 2e-09
Identities = 33/58 (56%), Positives = 35/58 (60%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHL 152
Score = 50.0 bits (114), Expect = 3e-05
Identities = 31/75 (41%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +3
Query: 78 IRAELGXPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAF 251
IR EL PG L GD Q+YN I+TAHA N LVP+++GAP +AF
Sbjct: 35 IRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAF 94
Query: 252 PE*II*DFDSYPPPL 296
P F PP L
Sbjct: 95 PRLNNISFWLLPPSL 109
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 64.1 bits (149), Expect = 2e-09
Identities = 33/58 (56%), Positives = 35/58 (60%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHL 152
Score = 50.0 bits (114), Expect = 3e-05
Identities = 31/75 (41%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +3
Query: 78 IRAELGXPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAF 251
IR EL PG L GD Q+YN I+TAHA N LVP+++GAP +AF
Sbjct: 35 IRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAF 94
Query: 252 PE*II*DFDSYPPPL 296
P F PP L
Sbjct: 95 PRLNNISFWLLPPSL 109
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 64.1 bits (149), Expect = 2e-09
Identities = 33/58 (56%), Positives = 35/58 (60%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHL 152
Score = 50.0 bits (114), Expect = 3e-05
Identities = 31/75 (41%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +3
Query: 78 IRAELGXPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAF 251
IR EL PG L GD Q+YN I+TAHA N LVP+++GAP +AF
Sbjct: 35 IRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAF 94
Query: 252 PE*II*DFDSYPPPL 296
P F PP L
Sbjct: 95 PRLNNISFWLLPPSL 109
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 62.9 bits (146), Expect = 4e-09
Identities = 33/75 (44%), Positives = 40/75 (53%)
Frame = +3
Query: 78 IRAELGXPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAFPE 257
IR ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAP +AFP
Sbjct: 21 IRTELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPR 80
Query: 258 *II*DFDSYPPPLYY 302
F +P +Y
Sbjct: 81 MNNMSFGFFPLHWHY 95
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 62.9 bits (146), Expect = 4e-09
Identities = 31/55 (56%), Positives = 35/55 (63%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 415
PR+NN+ F +VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 11 PRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 62.5 bits (145), Expect = 5e-09
Identities = 30/59 (50%), Positives = 38/59 (64%)
Frame = +3
Query: 78 IRAELGXPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAFP 254
IR ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+P ++FP
Sbjct: 21 IRLELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFP 79
Score = 56.4 bits (130), Expect = 3e-07
Identities = 28/58 (48%), Positives = 32/58 (55%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PR+NN+ F + G GTG TVYPPLS + H G SVDL IFSLHL
Sbjct: 79 PRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHL 136
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 62.1 bits (144), Expect = 6e-09
Identities = 33/59 (55%), Positives = 38/59 (64%)
Frame = +3
Query: 78 IRAELGXPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAFP 254
IRAELG PG+L+GDDQ N IVTAHA N LVPL++GAP +AFP
Sbjct: 38 IRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFP 96
Score = 36.7 bits (81), Expect = 0.27
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 367
PR+NN+ F VE GAGTG TVYPPL+
Sbjct: 96 PRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 62.1 bits (144), Expect = 6e-09
Identities = 34/58 (58%), Positives = 37/58 (63%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PR N+ F VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+
Sbjct: 14 PRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHM 71
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 62.1 bits (144), Expect = 6e-09
Identities = 31/58 (53%), Positives = 36/58 (62%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PR+NNI F +VE G+GTG TVYPPLS +H G +VDLAIFSLHL
Sbjct: 98 PRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHL 155
Score = 47.6 bits (108), Expect = 1e-04
Identities = 28/75 (37%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 78 IRAELGXPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAF 251
IR EL PG I G+ Q+YN ++TAHA N VP+++GAP +AF
Sbjct: 38 IRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGAPDMAF 97
Query: 252 PE*II*DFDSYPPPL 296
P F PP L
Sbjct: 98 PRLNNISFWLLPPSL 112
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 61.7 bits (143), Expect = 8e-09
Identities = 31/58 (53%), Positives = 36/58 (62%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PR+NNI F +VE G GTG TVYPPLSS +H G +VDLAIFSLH+
Sbjct: 103 PRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHI 160
Score = 48.0 bits (109), Expect = 1e-04
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +3
Query: 78 IRAELGXPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAF 251
IR EL P + L+G+ QIYN ++TAHA N LVP+++G+P +AF
Sbjct: 43 IRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPVMIGGFGNWLVPIMIGSPDMAF 102
Query: 252 PE*II*DFDSYPPPL 296
P F PP L
Sbjct: 103 PRLNNISFWLLPPSL 117
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 58.8 bits (136), Expect = 6e-08
Identities = 29/58 (50%), Positives = 34/58 (58%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PR+NNI + +ENG GTG T+YPPLS +H G SVDLAIF LHL
Sbjct: 96 PRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHL 153
Score = 46.0 bits (104), Expect = 4e-04
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 78 IRAELGXPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAFP 254
IR EL PG I D+Q+YN+I+TAHA N L+PL LG P + FP
Sbjct: 37 IRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGLGGPDMGFP 96
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 56.8 bits (131), Expect = 2e-07
Identities = 25/58 (43%), Positives = 36/58 (62%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHL 170
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 56.8 bits (131), Expect = 2e-07
Identities = 25/58 (43%), Positives = 36/58 (62%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHL 170
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 56.8 bits (131), Expect = 2e-07
Identities = 25/58 (43%), Positives = 36/58 (62%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHL 170
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 56.8 bits (131), Expect = 2e-07
Identities = 25/58 (43%), Positives = 36/58 (62%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHL 170
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 56.4 bits (130), Expect = 3e-07
Identities = 26/58 (44%), Positives = 32/58 (55%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PR+NN+ + I+ENG GTG T+YPPLS +H VDL IF LHL
Sbjct: 122 PRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHL 179
Score = 44.8 bits (101), Expect = 0.001
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 78 IRAELGXPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAFP 254
IR EL PG I D+Q+YN+I+T+H N L+P+++G P +AFP
Sbjct: 63 IRLELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFP 122
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 56.0 bits (129), Expect = 4e-07
Identities = 29/58 (50%), Positives = 31/58 (53%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PR+NN F E G GTG TVYPPLSS +H G SVDL IFS HL
Sbjct: 99 PRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHL 156
Score = 37.9 bits (84), Expect = 0.11
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +3
Query: 78 IRAELGXPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAF 251
+R EL PG L G+ YN I T H N VP+++GAP ++F
Sbjct: 39 MRLELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSF 98
Query: 252 P 254
P
Sbjct: 99 P 99
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 54.4 bits (125), Expect = 1e-06
Identities = 29/57 (50%), Positives = 34/57 (59%)
Frame = +2
Query: 254 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
R+NNI F +VE GAGTG TVY PL+ +H G +VDLAIFSLHL
Sbjct: 102 RLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHL 158
Score = 37.9 bits (84), Expect = 0.11
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +3
Query: 78 IRAELGXPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAF 251
IR EL GS L G+ Q +N ++TAHA N L+PL+LGA +AF
Sbjct: 41 IRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAF 100
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 54.4 bits (125), Expect = 1e-06
Identities = 30/62 (48%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSL 418
PR+NNI F I+E G GTG T+ YPPLS +H G SVDLAIF+L
Sbjct: 124 PRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFAL 183
Query: 419 HL 424
HL
Sbjct: 184 HL 185
Score = 48.0 bits (109), Expect = 1e-04
Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3
Query: 78 IRAELGXPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAFP 254
IR EL PG I ++Q+YN+I+TAHA N L+PL++G P +AFP
Sbjct: 65 IRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPALIGGFGNFLMPLMIGGPDMAFP 124
Query: 255 E*II*DFDSYPPPL 296
F PP L
Sbjct: 125 RLNNISFWLLPPSL 138
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 52.4 bits (120), Expect = 5e-06
Identities = 24/36 (66%), Positives = 27/36 (75%)
Frame = +2
Query: 317 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
+VE G G G TVYPPL+S + H G SVD AIFSLHL
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHL 47
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 50.0 bits (114), Expect = 3e-05
Identities = 31/75 (41%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +3
Query: 78 IRAELGXPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAF 251
IR EL PG L GD Q+YN I+TAHA N LVP+++GAP +AF
Sbjct: 35 IRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAF 94
Query: 252 PE*II*DFDSYPPPL 296
P F PP L
Sbjct: 95 PRLNNISFWLLPPSL 109
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 47.2 bits (107), Expect = 2e-04
Identities = 20/58 (34%), Positives = 32/58 (55%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PR+NN+ + +++ GAG G T YPP+S+ R+VD AIF++H+
Sbjct: 201 PRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHV 258
Score = 31.9 bits (69), Expect = 7.5
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +3
Query: 81 RAELGXPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAFP 254
+A LG L G D ++N ++T H N +PL++GAP +AFP
Sbjct: 142 QALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFP 201
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 46.8 bits (106), Expect = 2e-04
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +3
Query: 78 IRAELGXPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAF 251
IR EL PG+ I G+ Q+YN ++TAHA N VP+++G+P +AF
Sbjct: 39 IRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGSPDMAF 98
Query: 252 PE*II*DFDSYPPPL 296
P F PP L
Sbjct: 99 PRLNNISFWLLPPSL 113
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 44.4 bits (100), Expect = 0.001
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +2
Query: 248 IPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
+PR+NN+ + G G G T+YPPLS++ G +DLA+FSLH+
Sbjct: 96 MPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHM 154
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 44.0 bits (99), Expect = 0.002
Identities = 24/58 (41%), Positives = 29/58 (50%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PR+ N+ F + G G VYPP SS +AH +VDL IF LHL
Sbjct: 85 PRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHL 142
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 43.2 bits (97), Expect = 0.003
Identities = 27/62 (43%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVE----NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSL 418
PR+NNI F V NGAGTG TVY PLS++ G +VD+AI SL
Sbjct: 135 PRMNNISFWLLIPAFALLLGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILSL 193
Query: 419 HL 424
H+
Sbjct: 194 HI 195
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 42.7 bits (96), Expect = 0.004
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 78 IRAELGXPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAF 251
IR EL PG G Q+YN+++T H N ++PL+LGAP +AF
Sbjct: 46 IRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAF 105
Query: 252 P 254
P
Sbjct: 106 P 106
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 39.1 bits (87), Expect = 0.050
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +2
Query: 359 PLSSNIAHRGRSVDLAIFSLHL 424
PL+S+IAH G SVD+AIFSLHL
Sbjct: 72 PLASSIAHAGASVDMAIFSLHL 93
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 37.9 bits (84), Expect = 0.11
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +3
Query: 78 IRAELGXPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAF 251
IR EL GS L G+ Q +N ++TAHA N L+PL+LGA +AF
Sbjct: 41 IRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAF 100
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 37.1 bits (82), Expect = 0.20
Identities = 21/59 (35%), Positives = 25/59 (42%)
Frame = +3
Query: 78 IRAELGXPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAFP 254
IR EL PG I D YN T H N ++PL+LGA +AFP
Sbjct: 67 IRVELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFP 125
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 37.1 bits (82), Expect = 0.20
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +3
Query: 78 IRAELGXPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAFPE 257
IR EL PG I D YN + T H N L+P+++GA +AFP+
Sbjct: 60 IRLELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPK 119
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 37.1 bits (82), Expect = 0.20
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 424
PR+NN+ F + E G G G T+YP L H + D +F++HL
Sbjct: 98 PRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHL 155
Score = 34.3 bits (75), Expect = 1.4
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +3
Query: 78 IRAELGXPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAF 251
IR EL G L GD Q YN ++T+H N +P++ G P + F
Sbjct: 38 IRLELSLIGCGILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVF 97
Query: 252 P 254
P
Sbjct: 98 P 98
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 36.7 bits (81), Expect = 0.27
Identities = 22/55 (40%), Positives = 26/55 (47%)
Frame = +1
Query: 256 NK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 420
NK +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 81 NKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 35.9 bits (79), Expect = 0.46
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSL 418
PRIN+I E G GTG T+YPPLS+++ +VD+ IF L
Sbjct: 100 PRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGL 156
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 35.1 bits (77), Expect = 0.81
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +3
Query: 78 IRAELGXPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAFP 254
+R EL PG + + YN+++T+H N L+PL++GA +AFP
Sbjct: 119 MRIELADPGMTVISNTFYNSLLTSHG-ITMLFLFATPIIAAFSNYLIPLLIGADDMAFP 176
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 35.1 bits (77), Expect = 0.81
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSL 418
PR+N +E G+GTG T+YPPLS+++++ G +D IF L
Sbjct: 103 PRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGL 156
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 34.3 bits (75), Expect = 1.4
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 78 IRAELGXPGSLIGDDQIYNTIVTAHA 155
IR EL GS++ +QIYNT+VT+HA
Sbjct: 21 IRLELETCGSVLRSEQIYNTLVTSHA 46
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 33.5 bits (73), Expect = 2.5
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +3
Query: 78 IRAELGXPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAFP 254
IR EL G I DD +YNT + H N +PL++GA +AFP
Sbjct: 39 IRLELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFP 98
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 33.1 bits (72), Expect = 3.3
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +3
Query: 99 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAFP 254
PG + D + YN ++T H N L+PL++GA +AFP
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFP 53
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 32.7 bits (71), Expect = 4.3
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 78 IRAELGXPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAFPE 257
+R EL P + + D +YN + T H N L+P ++GAP +AFP+
Sbjct: 61 VRGELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPK 119
>UniRef50_Q8ID15 Cluster: Putative uncharacterized protein
MAL13P1.352; n=2; Plasmodium|Rep: Putative
uncharacterized protein MAL13P1.352 - Plasmodium
falciparum (isolate 3D7)
Length = 1106
Score = 32.3 bits (70), Expect = 5.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 283 TPLPYIINFKKNCRKWCRN 339
T L Y + KK+CRKWCRN
Sbjct: 697 TKLMYCVIKKKHCRKWCRN 715
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 31.9 bits (69), Expect = 7.5
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +3
Query: 78 IRAELGXPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPXIAFP 254
IR +L P + + YN I+T H N +VPL+LGA +A P
Sbjct: 49 IRTQLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALP 107
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 304,094,266
Number of Sequences: 1657284
Number of extensions: 4719031
Number of successful extensions: 7631
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 7435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7593
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26870548160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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