Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0800
(666 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 94 3e-18
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 86 8e-16
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 86 8e-16
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 79 7e-14
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 78 2e-13
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 77 5e-13
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 77 5e-13
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 76 7e-13
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 75 2e-12
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 75 2e-12
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 74 4e-12
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 74 4e-12
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 73 5e-12
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 73 5e-12
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 73 6e-12
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 71 3e-11
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 71 3e-11
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 70 4e-11
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 70 4e-11
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 69 8e-11
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 69 1e-10
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 69 1e-10
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 68 2e-10
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 68 2e-10
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 66 9e-10
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 65 1e-09
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 65 2e-09
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 62 2e-08
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 61 2e-08
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 61 2e-08
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 61 2e-08
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 61 2e-08
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 60 4e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 8e-08
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 59 8e-08
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 58 1e-07
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 58 2e-07
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 56 1e-06
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 56 1e-06
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 52 9e-06
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 52 1e-05
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 50 4e-05
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 49 9e-05
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 48 3e-04
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 47 4e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 47 4e-04
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 47 4e-04
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 47 5e-04
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 45 0.001
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 45 0.002
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 44 0.003
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 43 0.006
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 43 0.008
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 41 0.023
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 41 0.023
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 41 0.031
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 40 0.071
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 40 0.071
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 39 0.12
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 38 0.16
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 38 0.29
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 37 0.38
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 37 0.38
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 37 0.38
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 37 0.38
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 37 0.50
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 37 0.50
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 36 0.66
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 36 1.2
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 35 2.0
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 33 4.7
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 33 4.7
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 33 6.2
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 33 6.2
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 33 8.2
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 33 8.2
UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3; ... 33 8.2
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 93.9 bits (223), Expect = 3e-18
Identities = 51/93 (54%), Positives = 58/93 (62%)
Frame = -2
Query: 293 KGGG*ESKSYIIYRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 114
K GG + RGNA+SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 113 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 15
PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/63 (61%), Positives = 46/63 (73%)
Frame = -3
Query: 436 DEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLILF 257
+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QNL+LF
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLF 137
Query: 256 IVG 248
I G
Sbjct: 138 IRG 140
Score = 76.2 bits (179), Expect = 7e-13
Identities = 37/57 (64%), Positives = 44/57 (77%)
Frame = -1
Query: 666 KC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGIDQM 496
KC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G+ M
Sbjct: 2 KC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSM 57
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 85.8 bits (203), Expect = 8e-16
Identities = 47/88 (53%), Positives = 49/88 (55%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 92 PRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 151
Query: 429 ISSXXXXXXXXXXXXXXXXXXXSFDQFP 512
ISS SFDQ P
Sbjct: 152 ISSILGAINFITTIINMRMNNLSFDQMP 179
Score = 85.8 bits (203), Expect = 8e-16
Identities = 41/53 (77%), Positives = 43/53 (81%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
+PLFV AVGITAF AGAIT+LLTDRNLNTSFFDPAGGGDPILYQH
Sbjct: 178 MPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQH 230
Score = 81.8 bits (193), Expect = 1e-14
Identities = 48/97 (49%), Positives = 50/97 (51%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 183
KDIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 10 KDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMP 69
Query: 184 XXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 294
N LVPL+LGAPD+AFPR F PP L
Sbjct: 70 IMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSL 106
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 85.8 bits (203), Expect = 8e-16
Identities = 47/88 (53%), Positives = 49/88 (55%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 68 PRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 127
Query: 429 ISSXXXXXXXXXXXXXXXXXXXSFDQFP 512
ISS SFDQ P
Sbjct: 128 ISSILGAINFITTIINMRINKMSFDQMP 155
Score = 83.0 bits (196), Expect = 6e-15
Identities = 39/53 (73%), Positives = 42/53 (79%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
+PLF+ AVGITA AGAIT+LLTDRNLNTSFFDPAGGGDPILYQH
Sbjct: 154 MPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQH 206
Score = 72.5 bits (170), Expect = 8e-12
Identities = 39/70 (55%), Positives = 42/70 (60%)
Frame = +1
Query: 85 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR*II 264
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 265 *DFDSYPPPL 294
F PP L
Sbjct: 73 MSFWLLPPSL 82
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 79.4 bits (187), Expect = 7e-14
Identities = 38/53 (71%), Positives = 41/53 (77%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
+PLFV AV ITA AGAIT+LLTDRN+NTSFFDPAGGGDPILYQH
Sbjct: 100 MPLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQH 152
Score = 66.5 bits (155), Expect = 5e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +3
Query: 318 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 437
VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXS 76
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 77.8 bits (183), Expect = 2e-13
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
+PLFV +V +TAF AGAIT+LLTDRN NT+FFDPAGGGDPILYQH
Sbjct: 184 LPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQH 236
Score = 66.9 bits (156), Expect = 4e-10
Identities = 33/63 (52%), Positives = 40/63 (63%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NNI F +VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G
Sbjct: 98 PRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSG 157
Query: 429 ISS 437
+SS
Sbjct: 158 VSS 160
Score = 56.4 bits (130), Expect = 6e-07
Identities = 35/99 (35%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXX 177
KDIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 14 KDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMV 73
Query: 178 XXXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 294
N VP+++GAPD+AFPR F PP L
Sbjct: 74 MPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSL 112
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 76.6 bits (180), Expect = 5e-13
Identities = 35/53 (66%), Positives = 40/53 (75%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
+PLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQH
Sbjct: 181 LPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQH 233
Score = 69.3 bits (162), Expect = 8e-11
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 429 ISS 437
ISS
Sbjct: 155 ISS 157
Score = 58.0 bits (134), Expect = 2e-07
Identities = 38/99 (38%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 177
KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 178 XXXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 294
N LVP+++GAPD+AFPR F PP L
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 76.6 bits (180), Expect = 5e-13
Identities = 35/53 (66%), Positives = 40/53 (75%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
+PLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQH
Sbjct: 181 LPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQH 233
Score = 69.3 bits (162), Expect = 8e-11
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 429 ISS 437
ISS
Sbjct: 155 ISS 157
Score = 58.0 bits (134), Expect = 2e-07
Identities = 38/99 (38%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 177
KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 178 XXXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 294
N LVP+++GAPD+AFPR F PP L
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 76.2 bits (179), Expect = 7e-13
Identities = 40/84 (47%), Positives = 45/84 (53%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 183
KDIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 14 KDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMP 73
Query: 184 XXXXXXXN*LVPLILGAPDIAFPR 255
N LVPL++GAPD+AFPR
Sbjct: 74 IMIGGFGNWLVPLMIGAPDMAFPR 97
Score = 73.7 bits (173), Expect = 4e-12
Identities = 38/63 (60%), Positives = 42/63 (66%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NN+ F VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAG
Sbjct: 96 PRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAG 155
Query: 429 ISS 437
ISS
Sbjct: 156 ISS 158
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/52 (67%), Positives = 38/52 (73%)
Frame = +2
Query: 509 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQH
Sbjct: 183 PLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQH 234
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/53 (67%), Positives = 39/53 (73%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
+ LFV +V ITA AGAIT+LLTDRN NTSFFDPAGGGDPILYQH
Sbjct: 164 VSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQH 216
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/63 (58%), Positives = 41/63 (65%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NN+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG
Sbjct: 78 PRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAG 137
Query: 429 ISS 437
+SS
Sbjct: 138 VSS 140
Score = 66.1 bits (154), Expect = 7e-10
Identities = 35/70 (50%), Positives = 40/70 (57%)
Frame = +1
Query: 85 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR*II 264
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 265 *DFDSYPPPL 294
F PP L
Sbjct: 83 MSFWFLPPSL 92
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 74.9 bits (176), Expect = 2e-12
Identities = 35/53 (66%), Positives = 40/53 (75%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
IPLFV ++ +TAF AGAIT+LLTDRN NTSFFD +GGGDPILYQH
Sbjct: 189 IPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQH 241
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/63 (52%), Positives = 39/63 (61%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NNI F +VE G GTG TVYPPLSS +H G +VDLAIFSLH++G
Sbjct: 103 PRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISG 162
Query: 429 ISS 437
SS
Sbjct: 163 ASS 165
Score = 56.8 bits (131), Expect = 4e-07
Identities = 35/99 (35%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 177
KDIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 19 KDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMV 78
Query: 178 XXXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 294
N LVP+++G+PD+AFPR F PP L
Sbjct: 79 MPVMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSL 117
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 73.7 bits (173), Expect = 4e-12
Identities = 39/84 (46%), Positives = 44/84 (52%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 183
KDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 13 KDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMP 72
Query: 184 XXXXXXXN*LVPLILGAPDIAFPR 255
N LVPL++GAPD+AFPR
Sbjct: 73 VMIGGFGNWLVPLMIGAPDMAFPR 96
Score = 71.7 bits (168), Expect = 1e-11
Identities = 34/52 (65%), Positives = 38/52 (73%)
Frame = +2
Query: 509 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
PLFV +V +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQH
Sbjct: 182 PLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQH 233
Score = 70.5 bits (165), Expect = 3e-11
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 429 ISS 437
+SS
Sbjct: 155 VSS 157
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 73.7 bits (173), Expect = 4e-12
Identities = 39/84 (46%), Positives = 44/84 (52%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 183
KDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 13 KDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMP 72
Query: 184 XXXXXXXN*LVPLILGAPDIAFPR 255
N LVPL++GAPD+AFPR
Sbjct: 73 ILIGGFGNWLVPLMIGAPDMAFPR 96
Score = 72.9 bits (171), Expect = 6e-12
Identities = 35/52 (67%), Positives = 38/52 (73%)
Frame = +2
Query: 509 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
PLFV AV +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQH
Sbjct: 182 PLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQH 233
Score = 70.5 bits (165), Expect = 3e-11
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 429 ISS 437
+SS
Sbjct: 155 VSS 157
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 73.3 bits (172), Expect = 5e-12
Identities = 38/84 (45%), Positives = 44/84 (52%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 183
KDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 2 KDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMP 61
Query: 184 XXXXXXXN*LVPLILGAPDIAFPR 255
N L+PL++GAPD+AFPR
Sbjct: 62 IMIGGFGNWLIPLMIGAPDMAFPR 85
Score = 70.5 bits (165), Expect = 3e-11
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NN+ F +E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 84 PRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 143
Query: 429 ISS 437
ISS
Sbjct: 144 ISS 146
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/41 (60%), Positives = 27/41 (65%)
Frame = +2
Query: 509 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 631
PLFV AV ITA A IT+LLTDRNLNT+FFDP
Sbjct: 171 PLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 73.3 bits (172), Expect = 5e-12
Identities = 36/53 (67%), Positives = 39/53 (73%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
IPLFV +V ITA AGAIT+LLTDR NT+FFDPAGGGDPILYQH
Sbjct: 182 IPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQH 234
Score = 71.3 bits (167), Expect = 2e-11
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NNI F +VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG
Sbjct: 96 PRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAG 155
Query: 429 ISS 437
+SS
Sbjct: 156 LSS 158
Score = 68.5 bits (160), Expect = 1e-10
Identities = 38/98 (38%), Positives = 47/98 (47%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 183
KDIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 14 KDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMP 73
Query: 184 XXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPLY 297
N VPL++GAPD+AFPR F PP L+
Sbjct: 74 TMIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALF 111
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 72.9 bits (171), Expect = 6e-12
Identities = 42/97 (43%), Positives = 48/97 (49%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 183
KDIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 13 KDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMP 72
Query: 184 XXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 294
N LVPL++GAPD+AFPR F PP L
Sbjct: 73 IMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSL 109
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/52 (67%), Positives = 38/52 (73%)
Frame = +2
Query: 509 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQH
Sbjct: 182 PLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQH 233
Score = 69.7 bits (163), Expect = 6e-11
Identities = 34/63 (53%), Positives = 40/63 (63%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NN+ F +VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAG 154
Query: 429 ISS 437
+SS
Sbjct: 155 VSS 157
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 70.9 bits (166), Expect = 3e-11
Identities = 32/53 (60%), Positives = 39/53 (73%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
+PLF +V +TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+QH
Sbjct: 287 VPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQH 339
Score = 50.4 bits (115), Expect = 4e-05
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G
Sbjct: 201 PRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSG 260
Query: 429 ISS 437
SS
Sbjct: 261 ASS 263
Score = 36.7 bits (81), Expect = 0.50
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +1
Query: 82 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 255
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 70.9 bits (166), Expect = 3e-11
Identities = 34/51 (66%), Positives = 38/51 (74%)
Frame = +2
Query: 512 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
LF +V ITA AGAIT+LLTDRN+NTSFFDP+GGGDPILYQH
Sbjct: 167 LFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQH 217
Score = 63.7 bits (148), Expect = 4e-09
Identities = 30/57 (52%), Positives = 38/57 (66%)
Frame = +1
Query: 85 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 255
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPR 80
Score = 60.9 bits (141), Expect = 3e-08
Identities = 31/63 (49%), Positives = 35/63 (55%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NN+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG
Sbjct: 79 PRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAG 138
Query: 429 ISS 437
SS
Sbjct: 139 ASS 141
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 70.1 bits (164), Expect = 4e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P INNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 429 ISS 437
ISS
Sbjct: 156 ISS 158
Score = 64.1 bits (149), Expect = 3e-09
Identities = 29/53 (54%), Positives = 37/53 (69%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
+PLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+H
Sbjct: 182 LPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEH 234
Score = 44.0 bits (99), Expect = 0.003
Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 177
KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 12 KDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLV 71
Query: 178 XXXXXXXXXN*LVPLILGAPDIAFPR 255
N L+PL++GA D AFPR
Sbjct: 72 MPALIGGFGNYLLPLMIGATDTAFPR 97
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 70.1 bits (164), Expect = 4e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P INNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 429 ISS 437
ISS
Sbjct: 156 ISS 158
Score = 64.1 bits (149), Expect = 3e-09
Identities = 29/53 (54%), Positives = 37/53 (69%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
+PLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+H
Sbjct: 182 LPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEH 234
Score = 44.0 bits (99), Expect = 0.003
Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 177
KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 12 KDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLV 71
Query: 178 XXXXXXXXXN*LVPLILGAPDIAFPR 255
N L+PL++GA D AFPR
Sbjct: 72 MPALIGGFGNYLLPLMIGATDTAFPR 97
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 69.3 bits (162), Expect = 8e-11
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 429 ISS 437
ISS
Sbjct: 155 ISS 157
Score = 58.0 bits (134), Expect = 2e-07
Identities = 38/99 (38%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 177
KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 178 XXXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 294
N LVP+++GAPD+AFPR F PP L
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 68.9 bits (161), Expect = 1e-10
Identities = 56/181 (30%), Positives = 74/181 (40%), Gaps = 1/181 (0%)
Frame = +1
Query: 85 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR*II 264
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 265 *DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISHIEEDP*ILLFFHYI*QVFXXXX 444
F +P +Y + K +DE TP + + + +F ++ V
Sbjct: 84 MSFGFFPLHWHY-YSFFTVKGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSSILG 142
Query: 445 XXXXXXXXXXXXXXXXXXXXNSLICMSCRDYSXXXXXXTTCFSWSYYNIINRS-KLKYII 621
+ IC+ Y TC S SYY IIN L YII
Sbjct: 143 SYWLYYNNSLYTVSSSSNGTTTFICLISVYYRYPSTPFFTCTSSSYYYIINSPLLLHYII 202
Query: 622 F 624
+
Sbjct: 203 W 203
Score = 33.1 bits (72), Expect = 6.2
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 384 GRSVDLAIFSLHLAGISS 437
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 68.9 bits (161), Expect = 1e-10
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P IN+I F +VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL
Sbjct: 96 PRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTS 155
Query: 429 ISS 437
ISS
Sbjct: 156 ISS 158
Score = 65.7 bits (153), Expect = 9e-10
Identities = 31/53 (58%), Positives = 36/53 (67%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
+PLFV A+ ITAF + IT+LL DRN NTSFF+ AGGGDPI YQH
Sbjct: 182 MPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQH 234
Score = 41.5 bits (93), Expect = 0.018
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 177
KDI +Y EL PGS L G+ Q++N +V HA
Sbjct: 12 KDISIMYFMLALFSGMAGSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLA 71
Query: 178 XXXXXXXXXN*LVPLILGAPDIAFPR 255
N ++PL++GA D++FPR
Sbjct: 72 MPALIGGFGNYMLPLMIGATDMSFPR 97
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 67.7 bits (158), Expect = 2e-10
Identities = 30/53 (56%), Positives = 37/53 (69%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
+PLFV +V +T+F A AIT+LL DRN NTSF+DP GGGD +LYQH
Sbjct: 185 LPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQH 237
Score = 59.3 bits (137), Expect = 8e-08
Identities = 31/63 (49%), Positives = 33/63 (52%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NN F E G GTG TVYPPLSS +H G SVDL IFS HL G
Sbjct: 99 PRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVG 158
Query: 429 ISS 437
I S
Sbjct: 159 IGS 161
Score = 41.1 bits (92), Expect = 0.023
Identities = 26/86 (30%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 177
K IG LY EL PG L G+ YN I T H
Sbjct: 15 KRIGILYLFFGVFNGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLMLFVVV 74
Query: 178 XXXXXXXXXN*LVPLILGAPDIAFPR 255
N VP+++GAPD++FPR
Sbjct: 75 MPILFGGFGNYFVPILIGAPDMSFPR 100
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 67.7 bits (158), Expect = 2e-10
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P INNI F +VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+
Sbjct: 96 PRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTS 155
Query: 429 ISS 437
ISS
Sbjct: 156 ISS 158
Score = 62.9 bits (146), Expect = 7e-09
Identities = 29/53 (54%), Positives = 36/53 (67%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
+PLFV A+ ITA + +T+LL DRN NTSFF+ AGGGDPILY+H
Sbjct: 182 LPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEH 234
Score = 41.9 bits (94), Expect = 0.013
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 177
KDI LY EL PG L G++Q++N +V HA
Sbjct: 12 KDIAVLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMV 71
Query: 178 XXXXXXXXXN*LVPLILGAPDIAFPR 255
N ++PL++GA D AFPR
Sbjct: 72 MPALIGGFGNYMLPLMIGATDTAFPR 97
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 65.7 bits (153), Expect = 9e-10
Identities = 39/84 (46%), Positives = 44/84 (52%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 183
KD GTL AELG PG+L+GDDQ N IVTAHA
Sbjct: 14 KDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMP 73
Query: 184 XXXXXXXN*LVPLILGAPDIAFPR 255
N LVPL++GAPD+AFPR
Sbjct: 74 IMIGGFGNWLVPLMIGAPDMAFPR 97
Score = 34.3 bits (75), Expect = 2.7
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 365
P +NN+ F VE GAGTG TVYPPL+
Sbjct: 96 PRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/53 (58%), Positives = 37/53 (69%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
+PLFV +V +TAF A AIT+LLTDRN T+F+D AGGGDP LYQH
Sbjct: 224 MPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQH 276
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +3
Query: 324 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 437
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASS 200
Score = 37.1 bits (82), Expect = 0.38
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 16/100 (16%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-------SLIGD------DQIY---NT 135
KDIGTLY AEL PG + D DQ Y N
Sbjct: 37 KDIGTLYLIFAIIAGIIGGAISGLMRAELAEPGIQYLQTWARFSDGPSATLDQAYHLWNV 96
Query: 136 IVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 255
++TAH N VP+++GAPD+AFPR
Sbjct: 97 LITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPR 136
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/51 (62%), Positives = 35/51 (68%)
Frame = +2
Query: 512 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
LF AV ITA AG IT++LTDRN NTSFF+ AGGGDPILYQH
Sbjct: 184 LFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQH 234
Score = 64.1 bits (149), Expect = 3e-09
Identities = 32/63 (50%), Positives = 38/63 (60%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NNI + +ENG GTG T+YPPLS +H G SVDLAIF LHL+G
Sbjct: 96 PRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSG 155
Query: 429 ISS 437
ISS
Sbjct: 156 ISS 158
Score = 52.8 bits (121), Expect = 7e-06
Identities = 31/85 (36%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXX 180
KDIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 13 KDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVM 72
Query: 181 XXXXXXXXN*LVPLILGAPDIAFPR 255
N L+PL LG PD+ FPR
Sbjct: 73 PALIGGFGNFLLPLGLGGPDMGFPR 97
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/63 (46%), Positives = 36/63 (57%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NN+ + I+ENG GTG T+YPPLS +H VDL IF LHL+G
Sbjct: 122 PRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSG 181
Query: 429 ISS 437
ISS
Sbjct: 182 ISS 184
Score = 61.3 bits (142), Expect = 2e-08
Identities = 32/53 (60%), Positives = 36/53 (67%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
+ LF AV ITA A AIT+LLTDRNLNTSF++ AGGGD ILYQH
Sbjct: 208 LALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQH 260
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXX 180
KDI LY EL PG I D+Q+YN+I+T+H
Sbjct: 39 KDIAILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVM 98
Query: 181 XXXXXXXXN*LVPLILGAPDIAFPR 255
N L+P+++G PD+AFPR
Sbjct: 99 PALIGGFGNFLLPILIGGPDMAFPR 123
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P INN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 429 ISS 437
+SS
Sbjct: 173 LSS 175
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
+PLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEH 251
Score = 39.5 bits (88), Expect = 0.071
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +1
Query: 94 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 255
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPR
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPR 114
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P INN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 429 ISS 437
+SS
Sbjct: 173 LSS 175
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
+PLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEH 251
Score = 39.5 bits (88), Expect = 0.071
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +1
Query: 94 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 255
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPR
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPR 114
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P INN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 429 ISS 437
+SS
Sbjct: 173 LSS 175
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
+PLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEH 251
Score = 39.5 bits (88), Expect = 0.071
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +1
Query: 94 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 255
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPR
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPR 114
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P INN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 429 ISS 437
+SS
Sbjct: 173 LSS 175
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
+PLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEH 251
Score = 39.5 bits (88), Expect = 0.071
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +1
Query: 94 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 255
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPR
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPR 114
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 60.5 bits (140), Expect = 4e-08
Identities = 30/55 (54%), Positives = 34/55 (61%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 413
P +NN+ F +VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 11 PRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/53 (45%), Positives = 28/53 (52%)
Frame = +1
Query: 508 SLICMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTF 666
+ ICM C +Y TCFS S+Y IIN K KY IF W P +STF
Sbjct: 94 TFICMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTF 146
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 8e-08
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +3
Query: 315 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 437
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 59.3 bits (137), Expect = 8e-08
Identities = 32/67 (47%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSL 416
P +NNI F I+E G GTG T+ YPPLS +H G SVDLAIF+L
Sbjct: 124 PRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFAL 183
Query: 417 HLAGISS 437
HL+G+SS
Sbjct: 184 HLSGVSS 190
Score = 56.8 bits (131), Expect = 4e-07
Identities = 35/98 (35%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXX 180
KDIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 41 KDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVM 100
Query: 181 XXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 294
N L+PL++G PD+AFPR F PP L
Sbjct: 101 PALIGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSL 138
Score = 53.6 bits (123), Expect = 4e-06
Identities = 22/28 (78%), Positives = 26/28 (92%)
Frame = +2
Query: 581 ITILLTDRNLNTSFFDPAGGGDPILYQH 664
IT++LTDRN NTSFF+ AGGGDPIL+QH
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQH 259
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 58.4 bits (135), Expect = 1e-07
Identities = 31/61 (50%), Positives = 37/61 (60%)
Frame = +3
Query: 255 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 434
+NNI F +VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G S
Sbjct: 103 LNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFS 162
Query: 435 S 437
S
Sbjct: 163 S 163
Score = 54.8 bits (126), Expect = 2e-06
Identities = 26/54 (48%), Positives = 33/54 (61%)
Frame = +2
Query: 503 SIPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
++PLF AV TA A +T+ + DRN NTSFF+ AGGGD +LYQH
Sbjct: 186 NVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQH 239
Score = 44.4 bits (100), Expect = 0.003
Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 177
KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 17 KDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFV 76
Query: 178 XXXXXXXXXN*LVPLILGAPDIAFPR 255
N L+PL+LGA D+AF R
Sbjct: 77 MPALVGGFGNYLMPLMLGASDMAFAR 102
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 58.0 bits (134), Expect = 2e-07
Identities = 38/99 (38%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 177
KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 178 XXXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 294
N LVP+++GAPD+AFPR F PP L
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 55.6 bits (128), Expect = 1e-06
Identities = 34/99 (34%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXX 177
KDIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 15 KDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMV 74
Query: 178 XXXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 294
N VP+++G+PD+AFPR F PP L
Sbjct: 75 MPAMIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSL 113
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/51 (50%), Positives = 32/51 (62%)
Frame = +2
Query: 512 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
LF+ A ITA AG +T++L DRN NTSF+D GGGD IL+QH
Sbjct: 186 LFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQH 236
Score = 41.5 bits (93), Expect = 0.018
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NN+ F + E G G G T+YP L H + D +F++HL G
Sbjct: 98 PRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLG 157
Query: 429 ISS 437
ISS
Sbjct: 158 ISS 160
Score = 38.7 bits (86), Expect = 0.12
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 100 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 255
G L GD Q YN ++T+H N +P++ G PD+ FPR
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPR 99
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 52.4 bits (120), Expect = 9e-06
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +2
Query: 572 AGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
A IT+LL DRN T+FF+P+GGGDPIL+QH
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQH 323
Score = 39.1 bits (87), Expect = 0.094
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +3
Query: 327 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 437
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
I +FV +T+F AG++ LL DRN NTSF+D GG+P+LYQH
Sbjct: 191 ISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQH 243
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 177
K IGT Y EL +PG G Q+YN+++T H
Sbjct: 22 KTIGTYYIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLV 81
Query: 178 XXXXXXXXXN*LVPLILGAPDIAFPR 255
N ++PL+LGAP++AFPR
Sbjct: 82 MPILIGGFGNWMLPLMLGAPEMAFPR 107
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 50.4 bits (115), Expect = 4e-05
Identities = 28/63 (44%), Positives = 33/63 (52%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P + N+ F + G G VYPP SS +AH +VDL IF LHLAG
Sbjct: 85 PRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAG 144
Query: 429 ISS 437
ISS
Sbjct: 145 ISS 147
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 49.2 bits (112), Expect = 9e-05
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 428
P +NN+ + G G G T+YPPLS++ G +DLA+FSLH+AG
Sbjct: 97 PRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAG 156
Query: 429 ISS 437
+SS
Sbjct: 157 MSS 159
Score = 47.6 bits (108), Expect = 3e-04
Identities = 19/31 (61%), Positives = 25/31 (80%)
Frame = +2
Query: 572 AGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
A +T+LL DR+ +TSF+ P GGGDPIL+QH
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPILWQH 236
Score = 36.7 bits (81), Expect = 0.50
Identities = 21/84 (25%), Positives = 33/84 (39%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 183
KDIGT+Y EL +PG + +Y++I+T HA
Sbjct: 15 KDIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMP 74
Query: 184 XXXXXXXN*LVPLILGAPDIAFPR 255
N +PL++ D++ PR
Sbjct: 75 TSIGGLGNWFIPLMIKIKDLSMPR 98
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +3
Query: 357 PLSSNIAHRGRSVDLAIFSLHLAGISS 437
PL+S+IAH G SVD+AIFSLHLAG+SS
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSS 98
Score = 32.7 bits (71), Expect = 8.2
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDR 604
+PLF+ AV IT AGAIT+LLTDR
Sbjct: 122 VPLFIWAVFITTVLLLLSLPVLAGAITMLLTDR 154
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = +2
Query: 503 SIPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
S+ LF ++ + + A IT++LTD++L T F+D GGDP+LYQH
Sbjct: 164 SLSLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQH 217
Score = 36.7 bits (81), Expect = 0.50
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3
Query: 330 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 437
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +1
Query: 520 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF 624
M C +YS +TC WSYYN IN SKLKYI+F
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILF 118
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 47.2 bits (107), Expect = 4e-04
Identities = 23/54 (42%), Positives = 31/54 (57%)
Frame = +2
Query: 503 SIPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
S+PLF A+ T+ A A+ +L D TSFF+P GGGDP++YQH
Sbjct: 191 SMPLFCWAMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQH 244
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 46.8 bits (106), Expect = 5e-04
Identities = 18/31 (58%), Positives = 26/31 (83%)
Frame = +2
Query: 572 AGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
AGA+T+L D+ L T+FF+PA GGDP++YQ+
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIYQN 189
Score = 37.9 bits (84), Expect = 0.22
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +1
Query: 97 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 255
PG + D + YN ++T H N L+PL++GA D+AFPR
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPR 54
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 45.2 bits (102), Expect = 0.001
Identities = 23/53 (43%), Positives = 32/53 (60%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
IPLFV ++ +T+F A T L+ DR + T FF+PA GGD +L+QH
Sbjct: 197 IPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQH 249
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +2
Query: 575 GAITILLTDRNLNTSFFDPAGGGDPILYQH 664
G + +LL+D + NT FFDP GDPILYQH
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILYQH 239
Score = 38.7 bits (86), Expect = 0.12
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 249 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLA 425
P IN+I E G GTG T+YPPLS+++ +VD+ IF L ++
Sbjct: 100 PRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVS 159
Query: 426 GISS 437
G++S
Sbjct: 160 GVAS 163
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 44.4 bits (100), Expect = 0.003
Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 177
KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 17 KDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFV 76
Query: 178 XXXXXXXXXN*LVPLILGAPDIAFPR 255
N L+PL+LGA D+AF R
Sbjct: 77 MPALVGGFGNYLMPLMLGASDMAFAR 102
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 43.2 bits (97), Expect = 0.006
Identities = 25/84 (29%), Positives = 36/84 (42%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 183
KDIG LY EL +PG + + YN+++T+H
Sbjct: 95 KDIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFLFATP 154
Query: 184 XXXXXXXN*LVPLILGAPDIAFPR 255
N L+PL++GA D+AFPR
Sbjct: 155 IIAAFS-NYLIPLLIGADDMAFPR 177
Score = 33.9 bits (74), Expect = 3.5
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = +2
Query: 578 AITILLTDRNLNTSFFDPAGGGDPILYQH 664
AI +LL DRN TSFF AG G IL+QH
Sbjct: 292 AIMMLLFDRNFGTSFF--AGEGGAILWQH 318
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 42.7 bits (96), Expect = 0.008
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +2
Query: 575 GAITILLTDRNLNTSFFDPAGGGDPILYQH 664
G +LL D + TSFF P GGGDP+L+QH
Sbjct: 230 GGAVMLLFDLSFGTSFFRPEGGGDPVLFQH 259
Score = 33.1 bits (72), Expect = 6.2
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +1
Query: 85 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 255
EL P + + D +YN + T H N L+P ++GAPD+AFP+
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPK 119
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 41.1 bits (92), Expect = 0.023
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
+PLFV + + A A+ +LL DR L ++FFDP GG +L+QH
Sbjct: 200 VPLFVWMMLMQAILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQH 252
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 41.1 bits (92), Expect = 0.023
Identities = 23/53 (43%), Positives = 29/53 (54%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
I LF ++ IT AG IT+LL+DRN N FF GG PIL+Q+
Sbjct: 14 INLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQY 66
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 40.7 bits (91), Expect = 0.031
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +3
Query: 318 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 437
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 126 LEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
Score = 39.1 bits (87), Expect = 0.094
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 524 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
++ +T+F ++ DR+ NT FF+ + GDP+LYQH
Sbjct: 193 SIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQH 239
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 39.5 bits (88), Expect = 0.071
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL-NTSFFDPAGGGDPILYQH 664
+PLFV A+ T+ G + +L+T NL FDPA GGDP+L+QH
Sbjct: 207 MPLFVWAIYATS-CIQVLATPVIGLLLVLVTVENLFGFGMFDPARGGDPVLFQH 259
Score = 38.7 bits (86), Expect = 0.12
Identities = 21/57 (36%), Positives = 25/57 (43%)
Frame = +1
Query: 85 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 255
EL PG I D YN T H N ++PL+LGA D+AFPR
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPR 126
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 39.5 bits (88), Expect = 0.071
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +2
Query: 572 AGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
A A+ +LLTDR + FF+PA GGDPI Y H
Sbjct: 205 AAALLMLLTDRLGVSGFFNPAVGGDPIAYAH 235
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 38.7 bits (86), Expect = 0.12
Identities = 29/99 (29%), Positives = 39/99 (39%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 177
KDI LY EL PG+ L G+ Q++N +V HA
Sbjct: 12 KDIAILYFIFAIFCGMAGTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLV 71
Query: 178 XXXXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 294
N L+PL++GA D++F R F PP L
Sbjct: 72 MPALIGGFGNYLLPLMIGASDMSFARLNNISFWLLPPAL 110
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 38.3 bits (85), Expect = 0.16
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +2
Query: 605 NLNTSFFDPAGGGDPILYQH 664
N T+FFDPAGGGD IL+QH
Sbjct: 191 NYYTTFFDPAGGGDXILFQH 210
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 37.5 bits (83), Expect = 0.29
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +1
Query: 85 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 255
EL PG I D YN + T H N L+P+++GA D+AFP+
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPK 119
Score = 37.5 bits (83), Expect = 0.29
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
+PLFV ++ T+ ++ ++ + FDPA GGDP+L+QH
Sbjct: 200 LPLFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQH 252
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 37.1 bits (82), Expect = 0.38
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGDPILYQH 664
+PL + + +TA A +LL DR+ T FF GGGDPIL+QH
Sbjct: 214 LPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQH 271
Score = 32.7 bits (71), Expect = 8.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 330 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 437
AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSS 190
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 37.1 bits (82), Expect = 0.38
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +2
Query: 578 AITILLTDRNLNTSFFDPAGGGDPILYQH 664
A +L DRN T FFD A GG P+L+QH
Sbjct: 241 AFLLLWLDRNAGTHFFDVAHGGRPLLWQH 269
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 37.1 bits (82), Expect = 0.38
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +2
Query: 578 AITILLTDRNLNTSFFDPAGGGDPILYQH 664
AIT LL DRN+N++ +D GDP+LYQH
Sbjct: 217 AITGLLLDRNINSTIYDVI--GDPVLYQH 243
Score = 33.5 bits (73), Expect = 4.7
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +3
Query: 336 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 437
+G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 37.1 bits (82), Expect = 0.38
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 578 AITILLTDRNLNTSFFDPAGGGDPILYQH 664
A+ +LL DRN T+FF A GGDPI +QH
Sbjct: 260 ALIMLLLDRNFGTTFFTVA-GGDPIFWQH 287
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 36.7 bits (81), Expect = 0.50
Identities = 21/53 (39%), Positives = 26/53 (49%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
+PLFV + AF A LL DR+ T FF P GGD +L+QH
Sbjct: 199 MPLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQH 251
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 36.7 bits (81), Expect = 0.50
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQ 661
+P++V +V + A ++L +R + S+F+PA GGDP+L+Q
Sbjct: 191 MPIYVWSVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQ 242
Score = 33.5 bits (73), Expect = 4.7
Identities = 22/84 (26%), Positives = 30/84 (35%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 183
K IG +Y +L P + + YN I+T H
Sbjct: 25 KKIGLMYTATAFFAFALAGVFSLLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQ 84
Query: 184 XXXXXXXN*LVPLILGAPDIAFPR 255
N +VPL+LGA D+A PR
Sbjct: 85 AGLTGFGNFVVPLMLGARDVALPR 108
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 36.3 bits (80), Expect = 0.66
Identities = 24/85 (28%), Positives = 31/85 (36%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXX 180
K +G LY EL G I DD +YNT + H
Sbjct: 15 KRVGILYLIGSIAAFAVAGIMAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAMILAFQI 74
Query: 181 XXXXXXXXN*LVPLILGAPDIAFPR 255
N +PL++GA D+AFPR
Sbjct: 75 PALTGFFANYFIPLMIGAKDVAFPR 99
Score = 35.5 bits (78), Expect = 1.2
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 578 AITILLTDRNLNTSFFDPAGGGDPILYQH 664
A+T+L D+ + T FFD A GGD + YQ+
Sbjct: 205 AVTMLTFDKYIGTHFFDAAAGGDALTYQN 233
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 578 AITILLTDRNLNTSFFDPAGGGDPILYQH 664
A+ ++ DR+ T+FF+ A GGDPIL QH
Sbjct: 366 AVIMMAFDRHWQTTFFEYAYGGDPILSQH 394
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 34.7 bits (76), Expect = 2.0
Identities = 21/55 (38%), Positives = 26/55 (47%)
Frame = +2
Query: 254 DK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 418
+K +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 81 NKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 33.5 bits (73), Expect = 4.7
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 599 DRNLNTSFFDPAGGGDPILYQH 664
+R + FFDP GGDP+L+QH
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQH 275
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 33.5 bits (73), Expect = 4.7
Identities = 22/84 (26%), Positives = 32/84 (38%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 183
K +G +Y AEL PG ++ +N + T H
Sbjct: 39 KQLGIMYIIMSFSFFFLGGLMALLIRAELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTP 98
Query: 184 XXXXXXXN*LVPLILGAPDIAFPR 255
N ++PL +GAPD+AFPR
Sbjct: 99 IVWGFA-NYVLPLQIGAPDVAFPR 121
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 33.1 bits (72), Expect = 6.2
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 664
+P+FV AV + +F A +L DR FF A GDPIL+QH
Sbjct: 204 MPIFVWAVLVMSFMIVFALPPLVIASLMLALDRMAGMHFFT-AASGDPILWQH 255
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 33.1 bits (72), Expect = 6.2
Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 5/36 (13%)
Frame = +2
Query: 572 AGAITILLTDRNLNTSFF-----DPAGGGDPILYQH 664
AGAI +LL +R+L FF DPA GDP L+QH
Sbjct: 209 AGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQH 243
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 32.7 bits (71), Expect = 8.2
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +2
Query: 506 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 616
I L ++ ITA AGAIT+LLTDRN+NT
Sbjct: 165 ISLLSWSILITAVLLLLSLPVLAGAITMLLTDRNMNT 201
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 32.7 bits (71), Expect = 8.2
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 9 YWNIIFYFWYLIRNNWNIFKTFNS 80
YWNI+F+FWYLI ++ K NS
Sbjct: 348 YWNIMFHFWYLISFISHLAKINNS 371
>UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein CLN3 - Candida albicans (Yeast)
Length = 785
Score = 32.7 bits (71), Expect = 8.2
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -1
Query: 657 YKIGSPPPAGSKNDVFKFRSVNN---IVIAPAKTGSDNNNKNAVIPTAH 520
Y++ +PP + +KN K S NN IA T ++NNN N+ +P H
Sbjct: 572 YQMVTPPNSANKNSN-KSNSANNNNTTTIATTTTTTNNNNNNSQLPAPH 619
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,588,149
Number of Sequences: 1657284
Number of extensions: 7973389
Number of successful extensions: 17565
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 16715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17507
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -