Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0799
(797 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 5e-15
SB_55143| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 78 1e-14
SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 75 5e-14
SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 70 2e-12
SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 2e-11
SB_24154| Best HMM Match : Glyco_hydro_18 (HMM E-Value=2.2e-32) 66 4e-11
SB_3142| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_20796| Best HMM Match : RVT_1 (HMM E-Value=0.047) 30 2.5
SB_48435| Best HMM Match : Ion_trans (HMM E-Value=1.7e-11) 29 4.4
SB_47634| Best HMM Match : Metallophos (HMM E-Value=1e-11) 29 4.4
>SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 78.6 bits (185), Expect = 5e-15
Identities = 40/79 (50%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Frame = +3
Query: 285 FRNFTSLRSKHPDVKFMVAVGGWA-EGG--SKYSHMVAQKSTRMSFIRSVVDFLKKYDFD 455
++ L+ K+P +K ++AVGGW E G S +S MVA KS R +FI S++ KYDFD
Sbjct: 455 YKEINDLKLKNPSLKTLLAVGGWNHESGPVSPFSQMVASKSNRTTFISSLLQLSDKYDFD 514
Query: 456 GLDLDWEYPGAADRGGSFP 512
G DLDWEYP A RG S P
Sbjct: 515 GFDLDWEYP--ASRGNSPP 531
Score = 48.0 bits (109), Expect = 9e-06
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +1
Query: 115 VCYFSNWAVYRPGVGRYGIEDIPVDLCTHLIYSFIGVTEKSSEV 246
VCYF+NWA YRP ++ +DI LCTH++Y+F + ++++
Sbjct: 401 VCYFTNWAQYRPDPVKFLPKDIDPLLCTHIVYAFAKIDPATNKI 444
Score = 33.9 bits (74), Expect = 0.15
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Frame = +2
Query: 512 DKDKFLYFVQELKRAFIRAGRGWE-----LTAAVPLANFRLMEGYHVPELCQELDAIHVM 676
DK F +E+ AF R + LTAAV + + Y V +L LD I++M
Sbjct: 533 DKQHFTILCEEMLDAFKRKAADTDKPRMLLTAAVSAGHGTVDAAYEVHKLAGILDWINLM 592
Query: 677 SYDLRXNW 700
+YDL W
Sbjct: 593 TYDLHGPW 600
>SB_55143| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 270
Score = 77.8 bits (183), Expect = 1e-14
Identities = 39/82 (47%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Frame = +3
Query: 273 DKSGFRNFTSLRSKHPDVKFMVAVGGW--AEGGSKYSHMVAQKSTRMSFIRSVVDFLKKY 446
D + F +L+ K+P++K ++AVGGW S +S MV +TR FI SV+ L+ +
Sbjct: 71 DDKLYPRFNALKQKNPELKTLLAVGGWNHENANSPFSRMVKTAATRKVFIDSVIRILRTW 130
Query: 447 DFDGLDLDWEYPGAADRGGSFP 512
FDGLDLDWEYP A RGGS P
Sbjct: 131 GFDGLDLDWEYP--ATRGGSPP 150
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/61 (47%), Positives = 38/61 (62%)
Frame = +1
Query: 55 TLAVLASCAALVQSDSRARIVCYFSNWAVYRPGVGRYGIEDIPVDLCTHLIYSFIGVTEK 234
TL VLA A + R VCY +NW+ YR G ++ EDIP DLCTHL+YSF + +K
Sbjct: 5 TLLVLAVAACATGNYVR---VCYHTNWSQYRQGRAKFWPEDIPADLCTHLMYSFAKINQK 61
Query: 235 S 237
+
Sbjct: 62 N 62
>SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 829
Score = 75.4 bits (177), Expect = 5e-14
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Frame = +3
Query: 273 DKSGFRNFTSLRSKHPDVKFMVAVGGWA--EGGSKYSHMVAQKSTRMSFIRSVVDFLKKY 446
D ++ +L+ +P +K +AVGGW E S +S MVA K R FI+S ++ L+ +
Sbjct: 74 DHELYQRINALKKINPKLKTQIAVGGWTHEEKNSPFSKMVATKEKRAIFIKSAIETLRTH 133
Query: 447 DFDGLDLDWEYPGAADRGGS 506
FDGLDLDWEYPG RGGS
Sbjct: 134 GFDGLDLDWEYPGM--RGGS 151
Score = 73.7 bits (173), Expect = 2e-13
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Frame = +3
Query: 285 FRNFTSLRSKHPDVKFMVAVGGWA--EGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDG 458
++ +L+ +P +K +AVGGW E S +S MVA K R FI+S ++ L+ FDG
Sbjct: 463 YKRINALKKINPKLKTQIAVGGWTHEEKNSPFSKMVATKEKRAIFIKSAIETLRTNGFDG 522
Query: 459 LDLDWEYPGAADRGGS 506
LDLDWEYPG RGGS
Sbjct: 523 LDLDWEYPGM--RGGS 536
Score = 52.4 bits (120), Expect = 4e-07
Identities = 29/68 (42%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +1
Query: 16 DEP*PLKMRAIFA-TLAVLASCAALVQSDSRARIVCYFSNWAVYRPGVGRYGIEDIPVDL 192
D P P I A LA+L C R VCY++NW+ YRP G + EDI L
Sbjct: 376 DGPLPPNTSLIMARVLAILILCFVPFAVSEYVR-VCYYTNWSQYRPKGGTFWPEDIDPHL 434
Query: 193 CTHLIYSF 216
CTH+I+SF
Sbjct: 435 CTHVIHSF 442
Score = 51.2 bits (117), Expect = 9e-07
Identities = 26/63 (41%), Positives = 38/63 (60%)
Frame = +1
Query: 58 LAVLASCAALVQSDSRARIVCYFSNWAVYRPGVGRYGIEDIPVDLCTHLIYSFIGVTEKS 237
LAVL CA V + R CY++NW+ YRP G + EDI LCTH+++SF V + +
Sbjct: 7 LAVLG-CALSVTASEYVR-GCYYTNWSQYRPKGGTFWPEDIDPFLCTHILFSFAKVNQTT 64
Query: 238 SEV 246
++
Sbjct: 65 HKL 67
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Frame = +2
Query: 509 SDKDKFLYFVQELKRAFIRAGR--GWE---LTAAVPLANFRLMEGYHVPELCQELDAIHV 673
SDK +F QEL+ AF + G E LTAAV + + + Y + + + LD I+V
Sbjct: 539 SDKGRFTLLCQELRDAFEAEAKDSGKERLLLTAAVAAGLWTIKDAYDIEGISKPLDWINV 598
Query: 674 MSYDLRXNW 700
M+YDL W
Sbjct: 599 MTYDLHGTW 607
Score = 41.1 bits (92), Expect = 0.001
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Frame = +2
Query: 509 SDKDKFLYFVQELKRAFIRAGR--GWE---LTAAVPLANFRLMEGYHVPELCQELDAIHV 673
SDK +F +EL+ AF + G E LTAAV + + Y + ++ + LD I++
Sbjct: 154 SDKGRFTLLCRELREAFEAEAKASGKERMLLTAAVAAGLWTIKGAYDIADIAEPLDWINL 213
Query: 674 MSYDLRXNW 700
M+YDL W
Sbjct: 214 MTYDLHGTW 222
>SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 569
Score = 70.1 bits (164), Expect = 2e-12
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Frame = +3
Query: 273 DKSGFRNFTSLRSKHPDVKFMVAVGGWAEGGSK--YSHMVAQKSTRMSFIRSVVDFLKKY 446
D ++ F L+ K+P +K ++AVGGW K +S MV ++R FI S + L+++
Sbjct: 183 DDKLYKEFNDLKLKNPGLKTLLAVGGWNHENYKSPFSRMVRTAASRKVFIDSSIAMLRQW 242
Query: 447 DFDGLDLDWEYPGAADRGGSFP 512
+FDG DLDWEYPG +R GS P
Sbjct: 243 NFDGFDLDWEYPG--NRVGSDP 262
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Frame = +2
Query: 512 DKDKFLYFVQELKRAF-IRAGRGWE----LTAAVPLANFRLMEGYHVPELCQELDAIHVM 676
DK +F QEL AF + A + LTAAV + + Y V ++ Q LD I++M
Sbjct: 264 DKQRFTILCQELLDAFKLEAAQTNRPRLLLTAAVAAGKATIDKAYEVDKIGQILDLINLM 323
Query: 677 SYDLRXNW 700
+YDLR W
Sbjct: 324 AYDLRGMW 331
>SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 66.9 bits (156), Expect = 2e-11
Identities = 31/72 (43%), Positives = 44/72 (61%)
Frame = +3
Query: 273 DKSGFRNFTSLRSKHPDVKFMVAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDF 452
D + ++ L+S ++K ++AVGGW G + MV+ S R FI + FL+ + F
Sbjct: 74 DAAMYKKVNDLKSSS-NMKTLLAVGGWNMGSGPFQDMVSTASRRKIFIDDAILFLRNHMF 132
Query: 453 DGLDLDWEYPGA 488
DGLDLDWEYPGA
Sbjct: 133 DGLDLDWEYPGA 144
Score = 48.4 bits (110), Expect = 7e-06
Identities = 24/63 (38%), Positives = 40/63 (63%)
Frame = +1
Query: 58 LAVLASCAALVQSDSRARIVCYFSNWAVYRPGVGRYGIEDIPVDLCTHLIYSFIGVTEKS 237
L +L ++L S S R VCY++NWA YR G+ +Y ++I LCTH++Y+F + +
Sbjct: 7 LPLLVVPSSLFASASYFR-VCYYTNWAQYR-GLAKYTPDNIDPSLCTHIVYAFAKMNADN 64
Query: 238 SEV 246
S++
Sbjct: 65 SKL 67
Score = 41.9 bits (94), Expect = 6e-04
Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +2
Query: 512 DKDKFLYFVQELKRAFIR--AGRGWE---LTAAVPLANFRLMEGYHVPELCQELDAIHVM 676
DK +F QEL AF A G LTAAV + GY + L Q LD I++M
Sbjct: 151 DKHRFTLLCQELLAAFETEAANTGKPRLLLTAAVSAGETTVKNGYEISALGQALDWINLM 210
Query: 677 SYDLRXNW 700
SYDL +W
Sbjct: 211 SYDLHGDW 218
>SB_24154| Best HMM Match : Glyco_hydro_18 (HMM E-Value=2.2e-32)
Length = 561
Score = 65.7 bits (153), Expect = 4e-11
Identities = 30/68 (44%), Positives = 42/68 (61%)
Frame = +3
Query: 285 FRNFTSLRSKHPDVKFMVAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLD 464
++ L+S ++K ++AVGGW G + MV+ S R FI + FL+ + FDGLD
Sbjct: 2 YKKVNDLKSSS-NMKTLLAVGGWNMGSGPFQDMVSTASRRKIFIDDAILFLRNHMFDGLD 60
Query: 465 LDWEYPGA 488
LDWEYPGA
Sbjct: 61 LDWEYPGA 68
Score = 41.9 bits (94), Expect = 6e-04
Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +2
Query: 512 DKDKFLYFVQELKRAFIR--AGRGWE---LTAAVPLANFRLMEGYHVPELCQELDAIHVM 676
DK +F QEL AF A G LTAAV + GY + L Q LD I++M
Sbjct: 75 DKHRFTLLCQELLAAFETEAANTGKPRLLLTAAVSAGETTVKNGYEISALGQALDWINLM 134
Query: 677 SYDLRXNW 700
SYDL +W
Sbjct: 135 SYDLHGDW 142
>SB_3142| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2209
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/29 (55%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = -1
Query: 86 NAAQLARTANV-ANIARIFNGYGSSVTAP 3
N+ Q AR A+ A+IA +FNGY SSV P
Sbjct: 1439 NSTQPARLASTPASIASLFNGYFSSVFGP 1467
>SB_20796| Best HMM Match : RVT_1 (HMM E-Value=0.047)
Length = 660
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/29 (55%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = -1
Query: 86 NAAQLARTANV-ANIARIFNGYGSSVTAP 3
N+ Q AR A+ A+IA +FNGY SSV P
Sbjct: 350 NSTQPARLASTPASIASLFNGYFSSVFGP 378
>SB_48435| Best HMM Match : Ion_trans (HMM E-Value=1.7e-11)
Length = 1496
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = +1
Query: 193 CTHLIYSFIGVTEKSSEVLIMIL-SWTWIRVVSVTSHPSAPNTPMSSSWSRLAAGLKAAP 369
C+ + +T S+ + IL S T S+ P+ P+ +W+ + L P
Sbjct: 1318 CSQWGMAITRITLISNAITFSILASHTSFGTESLAPSPTPSKEPLGGTWANTRSSLTTTP 1377
Query: 370 STHTWWPRRALGCPSSEALSTS*RNMTST 456
S T A P+S +S + +N TS+
Sbjct: 1378 SFPTTSLMLAPVTPASLIISQATKNATSS 1406
>SB_47634| Best HMM Match : Metallophos (HMM E-Value=1e-11)
Length = 585
Score = 29.1 bits (62), Expect = 4.4
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Frame = +3
Query: 231 EIKRSS--HYDPELDVDKSGFRNFTSLRSKHPDVKFMVAVGGWAEGGSKYSHMVAQKSTR 404
++K SS +Y D+ S +NFT+ +PDV F V G +G S +H A+ S
Sbjct: 251 DLKPSSLYYYQYGTDLGMSKLKNFTTAPLPNPDVSFKFLVYG-DQGISADAHNTARYSLE 309
Query: 405 MSFIRSVVDFLKKYDF---DGLDLDWE 476
R+ + D +G WE
Sbjct: 310 EILYRNATMVIHLGDIAYAEGYAYQWE 336
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,370,748
Number of Sequences: 59808
Number of extensions: 593408
Number of successful extensions: 1532
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1524
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2203769656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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