Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0798
         (769 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q25490 Cluster: Apolipophorins precursor [Contains: Apo...   138   2e-31
UniRef50_Q2IHJ2 Cluster: Putative uncharacterized protein precur...    38   0.36 
UniRef50_Q73IV6 Cluster: Protein tolB precursor; n=6; Wolbachia|...    36   1.1  
UniRef50_Q141I4 Cluster: Putative signal peptide protein, TPR do...    35   2.6  
UniRef50_Q1MYB4 Cluster: Penicillin-binding protein 2; n=1; Ocea...    33   7.8  

>UniRef50_Q25490 Cluster: Apolipophorins precursor [Contains:
            Apolipophorin-2 (Apolipophorin II) (apoLp-2);
            Apolipophorin-1 (Apolipophorin I) (apoLp-1)]; n=5;
            Ditrysia|Rep: Apolipophorins precursor [Contains:
            Apolipophorin-2 (Apolipophorin II) (apoLp-2);
            Apolipophorin-1 (Apolipophorin I) (apoLp-1)] - Manduca
            sexta (Tobacco hawkmoth) (Tobacco hornworm)
          Length = 3305

 Score =  138 bits (333), Expect = 2e-31
 Identities = 63/115 (54%), Positives = 81/115 (70%)
 Frame = +2

Query: 2    VEKGEKKFNDNFILTVRLPFEKAHDIKWVSTIFFLQPEGKDFAEYTLVESVQINADLYKI 181
            ++ G+KK+ D++ LTVRLPFEKAHDIKWVST+ FLQP+G++  EYTLVESVQINAD+YKI
Sbjct: 1691 LDAGDKKYLDDYTLTVRLPFEKAHDIKWVSTVLFLQPQGQEMTEYTLVESVQINADVYKI 1750

Query: 182  DVNGKKSLKDGTGTIKFLVPHVDPSYWSINTRMDLKGRKRATKSKRKRNMAKAKA 346
            D NGK   K+G G +K LVPHV+P     N +   +G K     + K    K K+
Sbjct: 1751 DANGKVGPKNGYGAVKVLVPHVEPFVLDYNYKSSHEGEKNNNYVELKTKYGKGKS 1805



 Score =  115 bits (276), Expect = 1e-24
 Identities = 63/169 (37%), Positives = 99/169 (58%), Gaps = 2/169 (1%)
 Frame = +1

Query: 226  QVLSPSC*SIILEYKYKNGLEGEKKSHEVEAKAQYGKGKSATISLDTAFSPHENYLQFKG 405
            +VL P     +L+Y YK+  EGEK ++ VE K +YGKGKSA++ +D++++PH + L+ K 
Sbjct: 1766 KVLVPHVEPFVLDYNYKSSHEGEKNNNYVELKTKYGKGKSASMVVDSSYAPHYSTLKVKA 1825

Query: 406  QAPQAENLKKLEFTINSKNPSPDSYSSTLIVDADEG--STNWRTM*YYLRPIQYWTSNTP 579
              P  +  KKL+ T++SKNPSPD+YS++++VDAD      +   +     P+     ++P
Sbjct: 1826 NTPNNDKFKKLDVTVHSKNPSPDAYSNSVVVDADGRVYKIDSSIVLSKAHPVLDIQYHSP 1885

Query: 580  VQARTDQXRFSSRAPLLVLLKAKSK*TYRIINGICLDAVSEGXIQKDNI 726
               +    R   +   L   + K +     IN ICLDAVSE  +QKDN+
Sbjct: 1886 SSDKI--RRLYLQGSSLSSTQGKLEVKVDNINDICLDAVSEANVQKDNV 1932



 Score = 75.4 bits (177), Expect = 1e-12
 Identities = 31/53 (58%), Positives = 48/53 (90%)
 Frame = +3

Query: 510  RVYKLENNVVLSKAHPVLDLKYSSPSSNRPRXIFIKGTSLSSTQGKIEVNLQD 668
            RVYK+++++VLSKAHPVLD++Y SPSS++ R ++++G+SLSSTQGK+EV + +
Sbjct: 1861 RVYKIDSSIVLSKAHPVLDIQYHSPSSDKIRRLYLQGSSLSSTQGKLEVKVDN 1913


>UniRef50_Q2IHJ2 Cluster: Putative uncharacterized protein
           precursor; n=1; Anaeromyxobacter dehalogenans 2CP-C|Rep:
           Putative uncharacterized protein precursor -
           Anaeromyxobacter dehalogenans (strain 2CP-C)
          Length = 557

 Score = 37.5 bits (83), Expect = 0.36
 Identities = 18/79 (22%), Positives = 34/79 (43%)
 Frame = +1

Query: 289 GEKKSHEVEAKAQYGKGKSATISLDTAFSPHENYLQFKGQAPQAENLKKLEFTINSKNPS 468
           G    + +    Q+G           A++P + +++F G+A   +     E ++   +PS
Sbjct: 350 GRNTDYFMNPAIQFGVASDCRAGPIVAYAPWKTWVRFDGRASAGQQRNSAEVSLGPMDPS 409

Query: 469 PDSYSSTLIVDADEGSTNW 525
             + SS +  D    STNW
Sbjct: 410 HVAVSSVVSFDEAAASTNW 428


>UniRef50_Q73IV6 Cluster: Protein tolB precursor; n=6;
           Wolbachia|Rep: Protein tolB precursor - Wolbachia
           pipientis wMel
          Length = 420

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 23/84 (27%), Positives = 39/84 (46%)
 Frame = +1

Query: 235 SPSC*SIILEYKYKNGLEGEKKSHEVEAKAQYGKGKSATISLDTAFSPHENYLQFKGQAP 414
           SP   S+++ +    G E    S ++ +K      K + IS   +FSP + Y+ F     
Sbjct: 241 SPDGKSLLISHSL--GGETNILSLDLSSKRTKKITKGSAISTSPSFSPDQKYMAFSSDIS 298

Query: 415 QAENLKKLEFTINSKNPSPDSYSS 486
            ++ L  ++FT  SK P   S+ S
Sbjct: 299 GSQQLYVIDFTNKSKKPKRISFGS 322


>UniRef50_Q141I4 Cluster: Putative signal peptide protein, TPR
            domain-containing; n=3; Burkholderia|Rep: Putative signal
            peptide protein, TPR domain-containing - Burkholderia
            xenovorans (strain LB400)
          Length = 1332

 Score = 34.7 bits (76), Expect = 2.6
 Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = +2

Query: 122  DFAEYTLVESVQINADLYKIDVNGKKSLKDGTGTIKFL-VPHVDPS 256
            D+ E TL  S++I ADLY I VNG +  +  T T + + VP VD S
Sbjct: 1043 DYTEQTLSGSLKI-ADLYMIGVNGMQRFQHSTDTTQLVNVPSVDRS 1087


>UniRef50_Q1MYB4 Cluster: Penicillin-binding protein 2; n=1;
           Oceanobacter sp. RED65|Rep: Penicillin-binding protein 2
           - Oceanobacter sp. RED65
          Length = 579

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
 Frame = +2

Query: 146 ESVQINADLYKIDVNGKKSLKDGT---GTIKFLVPHVDPSYWSINTRMDLKGRKRATKSK 316
           E + ++  +  I +N K+ L+D     G ++ L  H+  S+W +  R+ L  +K     +
Sbjct: 74  EPLAVSTPVKSIWINPKQFLQDSKDIEGDLRQLAFHLSQSFWQLKNRVLLNKQKEFMYLE 133

Query: 317 RKRNMAKAKALQ 352
           R++    AKA+Q
Sbjct: 134 RQQTPLLAKAIQ 145


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 799,334,053
Number of Sequences: 1657284
Number of extensions: 16754021
Number of successful extensions: 43452
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 41834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43427
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64204279620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)