Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0798
         (769 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.50 
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           24   1.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.6  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   6.2  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 25.4 bits (53), Expect = 0.50
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +2

Query: 290 GRKRATKSKRKRNMAKAKALQYPWTLRSRHTKTISSSKGKLPKPR 424
           GR+R T+ KRK+++   K L+     R++H      S   L K R
Sbjct: 586 GRRRQTREKRKKSLPVRKLLELE---RAQHEFKNGDSSSLLDKMR 627


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 23/90 (25%), Positives = 43/90 (47%)
 Frame = +2

Query: 188 NGKKSLKDGTGTIKFLVPHVDPSYWSINTRMDLKGRKRATKSKRKRNMAKAKALQYPWTL 367
           N  K + +G   ++  +P+   + +  N+R    G K+ +K +  R MA  + ++    L
Sbjct: 63  NRVKQVNNGFANLRQHIPNFIAAAFESNSR---GGNKKLSKVETLR-MA-VEYIRSLEDL 117

Query: 368 RSRHTKTISSSKGKLPKPRT*RNWSSL*TP 457
            +    T+SSS   +P P T  + S+  TP
Sbjct: 118 LALDESTVSSSTSSIPSPSTTDDLSTNPTP 147


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 213 PSLRLFLPFTSILYK 169
           P +++FLPF  + YK
Sbjct: 488 PDVKIFLPFRFLFYK 502


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +2

Query: 350 QYPWTLRSRHTKTISSSKGKLPK 418
           +YPW    + T+  S  +  LP+
Sbjct: 114 EYPWMKEKKTTRKSSQQENGLPR 136


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,644
Number of Sequences: 336
Number of extensions: 4043
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)