Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0798
         (769 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC109312-1|AAI09313.1|  637|Homo sapiens MYRIP protein protein.        31   4.5  
BC109311-1|AAI09312.1|  770|Homo sapiens MYRIP protein protein.        31   4.5  
BC092512-1|AAH92512.1|  859|Homo sapiens myosin VIIA and Rab int...    31   4.5  
AF396687-1|AAM43954.1|  859|Homo sapiens rab effector MYRIP prot...    31   4.5  
AB083783-1|BAC15555.1|  859|Homo sapiens Slp homologue lacking C...    31   4.5  

>BC109312-1|AAI09313.1|  637|Homo sapiens MYRIP protein protein.
          Length = 637

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 16/52 (30%), Positives = 30/52 (57%)
 Frame = +3

Query: 312 RSESAIWQRQKRYNILGHCVLATRKLSPVQRASSPSREPEETGVHYKLQESV 467
           R+ +A+W+ Q  ++I G   L T    PV+   +PSR+P + G H + + ++
Sbjct: 285 RAPAALWRSQSAFSITGEEALKT---PPVE---APSRQPRDQGQHPRAESAL 330


>BC109311-1|AAI09312.1|  770|Homo sapiens MYRIP protein protein.
          Length = 770

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 16/52 (30%), Positives = 30/52 (57%)
 Frame = +3

Query: 312 RSESAIWQRQKRYNILGHCVLATRKLSPVQRASSPSREPEETGVHYKLQESV 467
           R+ +A+W+ Q  ++I G   L T    PV+   +PSR+P + G H + + ++
Sbjct: 196 RAPAALWRSQSAFSITGEEALKT---PPVE---APSRQPRDQGQHPRAESAL 241


>BC092512-1|AAH92512.1|  859|Homo sapiens myosin VIIA and Rab
           interacting protein protein.
          Length = 859

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 16/52 (30%), Positives = 30/52 (57%)
 Frame = +3

Query: 312 RSESAIWQRQKRYNILGHCVLATRKLSPVQRASSPSREPEETGVHYKLQESV 467
           R+ +A+W+ Q  ++I G   L T    PV+   +PSR+P + G H + + ++
Sbjct: 285 RAPAALWRSQSAFSITGEEALKT---PPVE---TPSRQPRDQGQHPRAESAL 330


>AF396687-1|AAM43954.1|  859|Homo sapiens rab effector MYRIP
           protein.
          Length = 859

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 16/52 (30%), Positives = 30/52 (57%)
 Frame = +3

Query: 312 RSESAIWQRQKRYNILGHCVLATRKLSPVQRASSPSREPEETGVHYKLQESV 467
           R+ +A+W+ Q  ++I G   L T    PV+   +PSR+P + G H + + ++
Sbjct: 285 RAPAALWRSQSAFSITGEEALKT---PPVE---APSRQPRDQGQHPRAESAL 330


>AB083783-1|BAC15555.1|  859|Homo sapiens Slp homologue lacking C2
           domains-c protein.
          Length = 859

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 16/52 (30%), Positives = 30/52 (57%)
 Frame = +3

Query: 312 RSESAIWQRQKRYNILGHCVLATRKLSPVQRASSPSREPEETGVHYKLQESV 467
           R+ +A+W+ Q  ++I G   L T    PV+   +PSR+P + G H + + ++
Sbjct: 285 RAPAALWRSQSAFSITGEEALKT---PPVE---APSRQPRDQGQHPRAESAL 330


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,375,445
Number of Sequences: 237096
Number of extensions: 2647456
Number of successful extensions: 5337
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5332
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)