Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0798
(769 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001634-1|AAN71389.1| 451|Drosophila melanogaster RE38701p pro... 30 4.0
AY058715-1|AAL13944.1| 451|Drosophila melanogaster LD45348p pro... 30 4.0
AE014297-327|AAF51973.2| 648|Drosophila melanogaster CG2179-PB,... 30 4.0
AE014297-326|AAF51972.2| 783|Drosophila melanogaster CG2179-PA,... 30 4.0
AY069804-1|AAL39949.1| 2555|Drosophila melanogaster SD04476p pro... 29 9.3
AF032870-1|AAC38820.1| 2559|Drosophila melanogaster Shar pei/DRh... 29 9.3
AF031930-1|AAB88816.1| 2559|Drosophila melanogaster putative gua... 29 9.3
AE013599-2403|AAM68490.2| 2559|Drosophila melanogaster CG9635-PF... 29 9.3
AE013599-2402|AAM68489.1| 2559|Drosophila melanogaster CG9635-PD... 29 9.3
>BT001634-1|AAN71389.1| 451|Drosophila melanogaster RE38701p
protein.
Length = 451
Score = 29.9 bits (64), Expect = 4.0
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +2
Query: 272 TRMDLKGRKRATKSKRKRNMAKAKALQYPWTLRSRHTKTISS-SKGKLPKPRT*RNWSSL 448
+R +GR+ +S+R ++ +++ + ++ RSR + + SS S+ K P R R +S
Sbjct: 267 SRSRSRGRRIVCRSRRSKSRSRSHYRKSSYSSRSRRSHSRSSRSRSKTPSQRKNRKLAS- 325
Query: 449 *TPRIRLRTHTVARS 493
T R R +++ +RS
Sbjct: 326 -TRRSRSSSYSRSRS 339
>AY058715-1|AAL13944.1| 451|Drosophila melanogaster LD45348p
protein.
Length = 451
Score = 29.9 bits (64), Expect = 4.0
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +2
Query: 272 TRMDLKGRKRATKSKRKRNMAKAKALQYPWTLRSRHTKTISS-SKGKLPKPRT*RNWSSL 448
+R +GR+ +S+R ++ +++ + ++ RSR + + SS S+ K P R R +S
Sbjct: 267 SRSRSRGRRIVCRSRRSKSRSRSHYRKSSYSSRSRRSHSRSSRSRSKTPSQRKNRKLAS- 325
Query: 449 *TPRIRLRTHTVARS 493
T R R +++ +RS
Sbjct: 326 -TRRSRSSSYSRSRS 339
>AE014297-327|AAF51973.2| 648|Drosophila melanogaster CG2179-PB,
isoform B protein.
Length = 648
Score = 29.9 bits (64), Expect = 4.0
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +2
Query: 272 TRMDLKGRKRATKSKRKRNMAKAKALQYPWTLRSRHTKTISS-SKGKLPKPRT*RNWSSL 448
+R +GR+ +S+R ++ +++ + ++ RSR + + SS S+ K P R R +S
Sbjct: 464 SRSRSRGRRIVCRSRRSKSRSRSHYRKSSYSSRSRRSHSRSSRSRSKTPSQRKNRKLAS- 522
Query: 449 *TPRIRLRTHTVARS 493
T R R +++ +RS
Sbjct: 523 -TRRSRSSSYSRSRS 536
>AE014297-326|AAF51972.2| 783|Drosophila melanogaster CG2179-PA,
isoform A protein.
Length = 783
Score = 29.9 bits (64), Expect = 4.0
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +2
Query: 272 TRMDLKGRKRATKSKRKRNMAKAKALQYPWTLRSRHTKTISS-SKGKLPKPRT*RNWSSL 448
+R +GR+ +S+R ++ +++ + ++ RSR + + SS S+ K P R R +S
Sbjct: 599 SRSRSRGRRIVCRSRRSKSRSRSHYRKSSYSSRSRRSHSRSSRSRSKTPSQRKNRKLAS- 657
Query: 449 *TPRIRLRTHTVARS 493
T R R +++ +RS
Sbjct: 658 -TRRSRSSSYSRSRS 671
>AY069804-1|AAL39949.1| 2555|Drosophila melanogaster SD04476p
protein.
Length = 2555
Score = 28.7 bits (61), Expect = 9.3
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +1
Query: 283 LEGEKKSHEVEAKAQYGKGKSATISLDTAFSPHENYLQFKGQAPQAENLKK 435
L+ ++ SH+ E+ +Q ++T + F PH+ +FK P ++ K
Sbjct: 526 LQQQRMSHQAESMSQSMHQHTSTPTSQQFFHPHQQQHRFKETGPTSKGKNK 576
>AF032870-1|AAC38820.1| 2559|Drosophila melanogaster Shar
pei/DRhoGEF2 protein.
Length = 2559
Score = 28.7 bits (61), Expect = 9.3
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +1
Query: 283 LEGEKKSHEVEAKAQYGKGKSATISLDTAFSPHENYLQFKGQAPQAENLKK 435
L+ ++ SH+ E+ +Q ++T + F PH+ +FK P ++ K
Sbjct: 530 LQQQRMSHQAESMSQSMHQHTSTPTSQQFFHPHQQQHRFKETGPTSKGKNK 580
>AF031930-1|AAB88816.1| 2559|Drosophila melanogaster putative
guanine nucleotide exchangefactor RhoGEF2 protein.
Length = 2559
Score = 28.7 bits (61), Expect = 9.3
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +1
Query: 283 LEGEKKSHEVEAKAQYGKGKSATISLDTAFSPHENYLQFKGQAPQAENLKK 435
L+ ++ SH+ E+ +Q ++T + F PH+ +FK P ++ K
Sbjct: 530 LQQQRMSHQAESMSQSMHQHTSTPTSQQFFHPHQQQHRFKETGPTSKGKNK 580
>AE013599-2403|AAM68490.2| 2559|Drosophila melanogaster CG9635-PF,
isoform F protein.
Length = 2559
Score = 28.7 bits (61), Expect = 9.3
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +1
Query: 283 LEGEKKSHEVEAKAQYGKGKSATISLDTAFSPHENYLQFKGQAPQAENLKK 435
L+ ++ SH+ E+ +Q ++T + F PH+ +FK P ++ K
Sbjct: 530 LQQQRMSHQAESMSQSMHQHTSTPTSQQFFHPHQQQHRFKETGPTSKGKNK 580
>AE013599-2402|AAM68489.1| 2559|Drosophila melanogaster CG9635-PD,
isoform D protein.
Length = 2559
Score = 28.7 bits (61), Expect = 9.3
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +1
Query: 283 LEGEKKSHEVEAKAQYGKGKSATISLDTAFSPHENYLQFKGQAPQAENLKK 435
L+ ++ SH+ E+ +Q ++T + F PH+ +FK P ++ K
Sbjct: 530 LQQQRMSHQAESMSQSMHQHTSTPTSQQFFHPHQQQHRFKETGPTSKGKNK 580
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,261,220
Number of Sequences: 53049
Number of extensions: 754957
Number of successful extensions: 1992
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1992
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -