Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0797
         (775 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    45   8e-07
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    37   2e-04
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   2.7  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.7  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   8.3  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 44.8 bits (101), Expect = 8e-07
 Identities = 25/77 (32%), Positives = 36/77 (46%)
 Frame = +2

Query: 299 LPRGETFVHTNELQMEEAVKVFRVLYYAKDFDVFMRTACWMRERINGGMFVYAFTAACFH 478
           L R E F        + A K+ R+   A+  D  +  A + R+R+N  +F YAF+ A  H
Sbjct: 74  LGRHENFSLFIPKHRKVAGKLIRIFLAAESIDDLLSNAVFCRDRVNPYLFYYAFSVALLH 133

Query: 479 RTDCKGLYLPLLTRSIP 529
           R D + L LP      P
Sbjct: 134 RPDTQNLDLPSFIHVFP 150


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 37.1 bits (82), Expect = 2e-04
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +2

Query: 383 KDFDVFMRTACWMRERINGGMFVYAFTAACFHRTDCKGLYLPLLTRSIP 529
           ++ D  +  A + R+R+N  +F YA + A  HR D + + LP    S P
Sbjct: 102 RNVDDLLSVAVYARDRVNPYLFSYALSVAILHRQDTQDIDLPSFIESFP 150



 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 609 PEDRVLGGFSHLHHKGFTDDMAVNEE 532
           P   V   F+HL H+ FT  + VN +
Sbjct: 466 PRGSVFVRFTHLQHQPFTYKITVNNQ 491


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 723 DVXHEIDITSFWDKERRTP 667
           D  HE + T  WD E++ P
Sbjct: 804 DFLHEDNTTLVWDNEQQVP 822


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 451 DEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFF 344
           D   ++ P + P R P +N + L  +E S +  G F
Sbjct: 125 DMETTLTPCASPNRKPDDNQDHLRRLEMSLEKSGLF 160


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 126 DMKMKELCIMKLLDHI 173
           D K+  LC+  L+DH+
Sbjct: 442 DEKLNALCMTWLMDHV 457


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,168
Number of Sequences: 336
Number of extensions: 3543
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)