Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0795
         (732 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.9  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   7.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +1

Query: 331  AEGFSYDFETSNGXXAXAXGVATNGVQSQGSFAYKGD 441
            A GF   +E  +        V  +  +  G +AYKGD
Sbjct: 1673 AAGFLAYYEICHNIKTQGWTVVQDPNRRMGPYAYKGD 1709


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 407 SSPKAASPTRVMMVRTIVSLTLPTRTDTSP 496
           SSP+ ++PT   +VR  +    P R   +P
Sbjct: 92  SSPQTSAPTGPPIVRCALRKHKPNRKPRTP 121


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 72  AATTNNFIVEFKVMFYLMLLLQ 7
           A+ T + + EF++  +LM LLQ
Sbjct: 565 ASPTCDLMYEFQIFTFLMSLLQ 586


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,235
Number of Sequences: 336
Number of extensions: 1927
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)