BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0794 (806 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 06_01_0455 - 3241217-3243176,3244426-3244670,3244869-3245255 31 1.4 >06_01_0455 - 3241217-3243176,3244426-3244670,3244869-3245255 Length = 863 Score = 30.7 bits (66), Expect = 1.4 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = +3 Query: 660 CAALSVHRIRGDTDTFAEISSVSRRSKKTPVQYQILSRCSSVNVEV 797 C LSVHR+RG + V+R +KK QI S+ + V Sbjct: 82 CIDLSVHRLRGSAGESGLAAKVARMAKKIGAFRQIASQIQKLKARV 127 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,064,406 Number of Sequences: 37544 Number of extensions: 475418 Number of successful extensions: 1265 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 1220 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1265 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2197677108 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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