BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0793 (696 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical pr... 30 1.4 L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome cond... 30 1.4 U50199-1|AAA91262.1| 427|Caenorhabditis elegans Pharyngeal enha... 29 3.2 AF160187-1|AAD42897.1| 425|Caenorhabditis elegans pharyngeal en... 29 3.2 Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 29 4.2 Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr... 28 5.5 Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr... 28 5.5 Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr... 28 5.5 Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr... 28 5.5 AF016683-5|AAB66196.2| 1010|Caenorhabditis elegans Hypothetical ... 27 9.7 >Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical protein R13G10.1 protein. Length = 1469 Score = 30.3 bits (65), Expect = 1.4 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Frame = +2 Query: 536 QALAKDFQYFEFTTGYLEEADRKLSIVGHLVPEKR--VDITADIILSGDKKNI 688 Q +A+ E +LE+A++KLS + H+ EKR D A + + D K I Sbjct: 930 QDIARQTAIIENNPSHLEQAEKKLSELEHMCLEKRSEADALAQLEVGEDVKGI 982 >L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome condensation protein protein. Length = 1469 Score = 30.3 bits (65), Expect = 1.4 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Frame = +2 Query: 536 QALAKDFQYFEFTTGYLEEADRKLSIVGHLVPEKR--VDITADIILSGDKKNI 688 Q +A+ E +LE+A++KLS + H+ EKR D A + + D K I Sbjct: 930 QDIARQTAIIENNPSHLEQAEKKLSELEHMCLEKRSEADALAQLEVGEDVKGI 982 >U50199-1|AAA91262.1| 427|Caenorhabditis elegans Pharyngeal enhancer binding protein1, isoform a protein. Length = 427 Score = 29.1 bits (62), Expect = 3.2 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 6/46 (13%) Frame = +2 Query: 134 PASTWIRRNRDTRPL--LDTSSTSPIIGIRKLLLP----KSDSSTQ 253 PA + +D +PL L TSP+I LLLP K DSSTQ Sbjct: 346 PAPLQVLNLKDLKPLPPLANIQTSPVIQAANLLLPVAALKKDSSTQ 391 >AF160187-1|AAD42897.1| 425|Caenorhabditis elegans pharyngeal enhancer binding protein-1 protein. Length = 425 Score = 29.1 bits (62), Expect = 3.2 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 6/46 (13%) Frame = +2 Query: 134 PASTWIRRNRDTRPL--LDTSSTSPIIGIRKLLLP----KSDSSTQ 253 PA + +D +PL L TSP+I LLLP K DSSTQ Sbjct: 344 PAPLQVLNLKDLKPLPPLANIQTSPVIQAANLLLPVAALKKDSSTQ 389 >Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical protein F07A11.4 protein. Length = 1095 Score = 28.7 bits (61), Expect = 4.2 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = +1 Query: 10 TPEFGNYASGVVFYLPSRVMALETTVTYPTSSDSPYIFSGEA 135 TP F + Y P+ L TT T T+SD+P + S A Sbjct: 30 TPSFNTFKYSPSSYTPNISRNLNTTSTGSTTSDTPKLSSSSA 71 >Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical protein T24B8.7b protein. Length = 2923 Score = 28.3 bits (60), Expect = 5.5 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +3 Query: 429 FVKVIDLEGTLDVQSKAKTQQAKLRFNFWRARRSASRLW 545 F K ++ + + +T + +R +FW RSA RLW Sbjct: 2350 FFKSLEANNSEMLTRMLETTEHDIRASFWHCMRSALRLW 2388 >Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical protein T24B8.7a protein. Length = 2920 Score = 28.3 bits (60), Expect = 5.5 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +3 Query: 429 FVKVIDLEGTLDVQSKAKTQQAKLRFNFWRARRSASRLW 545 F K ++ + + +T + +R +FW RSA RLW Sbjct: 2347 FFKSLEANNSEMLTRMLETTEHDIRASFWHCMRSALRLW 2385 >Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical protein T24B8.7b protein. Length = 2923 Score = 28.3 bits (60), Expect = 5.5 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +3 Query: 429 FVKVIDLEGTLDVQSKAKTQQAKLRFNFWRARRSASRLW 545 F K ++ + + +T + +R +FW RSA RLW Sbjct: 2350 FFKSLEANNSEMLTRMLETTEHDIRASFWHCMRSALRLW 2388 >Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical protein T24B8.7a protein. Length = 2920 Score = 28.3 bits (60), Expect = 5.5 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +3 Query: 429 FVKVIDLEGTLDVQSKAKTQQAKLRFNFWRARRSASRLW 545 F K ++ + + +T + +R +FW RSA RLW Sbjct: 2347 FFKSLEANNSEMLTRMLETTEHDIRASFWHCMRSALRLW 2385 >AF016683-5|AAB66196.2| 1010|Caenorhabditis elegans Hypothetical protein K09F6.6 protein. Length = 1010 Score = 27.5 bits (58), Expect = 9.7 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Frame = +2 Query: 455 NIGRAK-QGEDPASQVEVQLLEGKEVSVQALAKDFQYFEFTTGYLEEADRKLSIVGHLVP 631 N+G+A QG + + +V+L E +V+++ + Q+F+ L E R +GH V Sbjct: 681 NMGKAVYQGYENETLTDVELEEYCKVTLRPIILGSQHFKALKENLTEEQRNWMDMGHFVM 740 Query: 632 EKRV 643 K + Sbjct: 741 AKLI 744 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,594,088 Number of Sequences: 27780 Number of extensions: 309459 Number of successful extensions: 829 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 802 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 829 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1602927856 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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