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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0793
         (696 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical pr...    30   1.4  
L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome cond...    30   1.4  
U50199-1|AAA91262.1|  427|Caenorhabditis elegans Pharyngeal enha...    29   3.2  
AF160187-1|AAD42897.1|  425|Caenorhabditis elegans pharyngeal en...    29   3.2  
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr...    28   5.5  
AF016683-5|AAB66196.2| 1010|Caenorhabditis elegans Hypothetical ...    27   9.7  

>Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical protein
            R13G10.1 protein.
          Length = 1469

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = +2

Query: 536  QALAKDFQYFEFTTGYLEEADRKLSIVGHLVPEKR--VDITADIILSGDKKNI 688
            Q +A+     E    +LE+A++KLS + H+  EKR   D  A + +  D K I
Sbjct: 930  QDIARQTAIIENNPSHLEQAEKKLSELEHMCLEKRSEADALAQLEVGEDVKGI 982


>L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome
            condensation protein protein.
          Length = 1469

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = +2

Query: 536  QALAKDFQYFEFTTGYLEEADRKLSIVGHLVPEKR--VDITADIILSGDKKNI 688
            Q +A+     E    +LE+A++KLS + H+  EKR   D  A + +  D K I
Sbjct: 930  QDIARQTAIIENNPSHLEQAEKKLSELEHMCLEKRSEADALAQLEVGEDVKGI 982


>U50199-1|AAA91262.1|  427|Caenorhabditis elegans Pharyngeal
           enhancer binding protein1, isoform a protein.
          Length = 427

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 6/46 (13%)
 Frame = +2

Query: 134 PASTWIRRNRDTRPL--LDTSSTSPIIGIRKLLLP----KSDSSTQ 253
           PA   +   +D +PL  L    TSP+I    LLLP    K DSSTQ
Sbjct: 346 PAPLQVLNLKDLKPLPPLANIQTSPVIQAANLLLPVAALKKDSSTQ 391


>AF160187-1|AAD42897.1|  425|Caenorhabditis elegans pharyngeal
           enhancer binding protein-1 protein.
          Length = 425

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 6/46 (13%)
 Frame = +2

Query: 134 PASTWIRRNRDTRPL--LDTSSTSPIIGIRKLLLP----KSDSSTQ 253
           PA   +   +D +PL  L    TSP+I    LLLP    K DSSTQ
Sbjct: 344 PAPLQVLNLKDLKPLPPLANIQTSPVIQAANLLLPVAALKKDSSTQ 389


>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
           protein F07A11.4 protein.
          Length = 1095

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +1

Query: 10  TPEFGNYASGVVFYLPSRVMALETTVTYPTSSDSPYIFSGEA 135
           TP F  +      Y P+    L TT T  T+SD+P + S  A
Sbjct: 30  TPSFNTFKYSPSSYTPNISRNLNTTSTGSTTSDTPKLSSSSA 71


>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical protein
            T24B8.7b protein.
          Length = 2923

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +3

Query: 429  FVKVIDLEGTLDVQSKAKTQQAKLRFNFWRARRSASRLW 545
            F K ++   +  +    +T +  +R +FW   RSA RLW
Sbjct: 2350 FFKSLEANNSEMLTRMLETTEHDIRASFWHCMRSALRLW 2388


>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical protein
            T24B8.7a protein.
          Length = 2920

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +3

Query: 429  FVKVIDLEGTLDVQSKAKTQQAKLRFNFWRARRSASRLW 545
            F K ++   +  +    +T +  +R +FW   RSA RLW
Sbjct: 2347 FFKSLEANNSEMLTRMLETTEHDIRASFWHCMRSALRLW 2385


>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical protein
            T24B8.7b protein.
          Length = 2923

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +3

Query: 429  FVKVIDLEGTLDVQSKAKTQQAKLRFNFWRARRSASRLW 545
            F K ++   +  +    +T +  +R +FW   RSA RLW
Sbjct: 2350 FFKSLEANNSEMLTRMLETTEHDIRASFWHCMRSALRLW 2388


>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical protein
            T24B8.7a protein.
          Length = 2920

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +3

Query: 429  FVKVIDLEGTLDVQSKAKTQQAKLRFNFWRARRSASRLW 545
            F K ++   +  +    +T +  +R +FW   RSA RLW
Sbjct: 2347 FFKSLEANNSEMLTRMLETTEHDIRASFWHCMRSALRLW 2385


>AF016683-5|AAB66196.2| 1010|Caenorhabditis elegans Hypothetical
           protein K09F6.6 protein.
          Length = 1010

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +2

Query: 455 NIGRAK-QGEDPASQVEVQLLEGKEVSVQALAKDFQYFEFTTGYLEEADRKLSIVGHLVP 631
           N+G+A  QG +  +  +V+L E  +V+++ +    Q+F+     L E  R    +GH V 
Sbjct: 681 NMGKAVYQGYENETLTDVELEEYCKVTLRPIILGSQHFKALKENLTEEQRNWMDMGHFVM 740

Query: 632 EKRV 643
            K +
Sbjct: 741 AKLI 744


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,594,088
Number of Sequences: 27780
Number of extensions: 309459
Number of successful extensions: 829
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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