Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0789
         (584 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0830 - 7678038-7678444,7678996-7680943,7681231-7681983,768...    29   2.7  
12_01_0636 + 5363436-5363848,5364041-5364354,5364792-5364817           28   4.8  

>12_01_0830 -
           7678038-7678444,7678996-7680943,7681231-7681983,
           7682701-7682824,7683590-7683723
          Length = 1121

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = -3

Query: 582 PXERDRFXAMAPFFSLDGVGHXPRRVMVSTPSDDSRDSHSFQAXRFQAARNVGRTA 415
           P  R R  + + F  L+ V    R+ M  TPS  +  SHS +  RF +      T+
Sbjct: 221 PLSRSRGGSPSSFSGLNMVSRGRRQSMSPTPSRRTISSHSTERDRFSSYSKASATS 276


>12_01_0636 + 5363436-5363848,5364041-5364354,5364792-5364817
          Length = 250

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +3

Query: 207 EQEYYRPWRHLAAAARMXGPA 269
           ++++  PW+H+AAA    GPA
Sbjct: 131 DEDHLLPWQHIAAAVTSGGPA 151


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,889,289
Number of Sequences: 37544
Number of extensions: 282516
Number of successful extensions: 667
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)