Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0789
         (584 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    24   0.96 
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    24   0.96 
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   2.9  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   5.1  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   5.1  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   8.9  

>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
          protein MRJP5 protein.
          Length = 598

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +3

Query: 15 GEYKHTKLYPSD 50
          GEY HTK YP D
Sbjct: 61 GEYDHTKNYPFD 72


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
          protein MRJP2 protein.
          Length = 452

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +3

Query: 15 GEYKHTKLYPSD 50
          GEY HTK YP D
Sbjct: 58 GEYDHTKNYPFD 69


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
          RJP57-1 protein.
          Length = 544

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 15 GEYKHTKLYPSD 50
          GE+ HTK YP D
Sbjct: 63 GEFDHTKNYPFD 74


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 359 VPVGSLHRDLXWREVLH 309
           VP  SLH  L WRE  +
Sbjct: 298 VPPLSLHGQLLWREFFY 314


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
          protein MRJP6 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 15 GEYKHTKLYPSD 50
          GEY +TK YP D
Sbjct: 61 GEYDYTKNYPFD 72


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
          RJP57-2 protein.
          Length = 464

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 15 GEYKHTKLYPSD 50
          GEY  TK YP D
Sbjct: 62 GEYDRTKNYPLD 73


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,822
Number of Sequences: 438
Number of extensions: 2557
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)